RNA–Protein interactions for RNA: ENST00000559361.5

PSEN1-224, Transcript of presenilin 1, human

TSL 5

Gene PSEN1, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSEN1-224	ENST00000559361	LARP4B	Q92615	738 aa	Known RBP	18.57	■□□□□ 0.56
PSEN1-224	ENST00000559361	CEP170P1	Q96L14	293 aa		18.57	■□□□□ 0.56
PSEN1-224	ENST00000559361	UST	Q9Y2C2	406 aa		18.57	■□□□□ 0.56
PSEN1-224	ENST00000559361		A0A1B0GVL5	298 aa		18.56	■□□□□ 0.56
PSEN1-224	ENST00000559361	ARHGEF35	A5YM69	484 aa		18.56	■□□□□ 0.56
PSEN1-224	ENST00000559361	POLR2D	O15514	142 aa	Known RBP	18.56	■□□□□ 0.56
PSEN1-224	ENST00000559361	DGAT1	O75907	488 aa		18.56	■□□□□ 0.56
PSEN1-224	ENST00000559361	AMPD3	Q01432	767 aa		18.56	■□□□□ 0.56
PSEN1-224	ENST00000559361	ECHDC2	Q86YB7	292 aa		18.56	■□□□□ 0.56
PSEN1-224	ENST00000559361	CEP57L1	Q8IYX8	460 aa		18.56	■□□□□ 0.56
PSEN1-224	ENST00000559361	SYT2	Q8N9I0	419 aa	Predicted RBP	18.56	■□□□□ 0.56
PSEN1-224	ENST00000559361	PIGO	Q8TEQ8	1089 aa		18.56	■□□□□ 0.56
PSEN1-224	ENST00000559361	SLC7A3	Q8WY07	619 aa		18.56	■□□□□ 0.56
PSEN1-224	ENST00000559361	RAD54L	Q92698	747 aa		18.56	■□□□□ 0.56
PSEN1-224	ENST00000559361	TIPIN	Q9BVW5	301 aa		18.56	■□□□□ 0.56
PSEN1-224	ENST00000559361	BHMT2	Q9H2M3	363 aa		18.56	■□□□□ 0.56
PSEN1-224	ENST00000559361	DNAH14	Q0VDD8	3507 aa		18.56	■□□□□ 0.56
PSEN1-224	ENST00000559361	DENND4A	Q7Z401	1863 aa		18.56	■□□□□ 0.56
PSEN1-224	ENST00000559361	DMXL1	Q9Y485	3027 aa		18.55	■□□□□ 0.56
PSEN1-224	ENST00000559361	VTN	P04004	478 aa		18.55	■□□□□ 0.56
PSEN1-224	ENST00000559361	ASGR2	P07307	311 aa		18.55	■□□□□ 0.56
PSEN1-224	ENST00000559361	NDUFA8	P51970	172 aa		18.55	■□□□□ 0.56
PSEN1-224	ENST00000559361	E2F4	Q16254	413 aa		18.55	■□□□□ 0.56
PSEN1-224	ENST00000559361	XKR9	Q5GH70	373 aa		18.55	■□□□□ 0.56
PSEN1-224	ENST00000559361	CLLU1OS	Q5K130	101 aa		18.55	■□□□□ 0.56
PSEN1-224	ENST00000559361	KIAA1841	Q6NSI8	718 aa		18.55	■□□□□ 0.56
PSEN1-224	ENST00000559361	KANK3	Q6NY19	840 aa		18.55	■□□□□ 0.56
PSEN1-224	ENST00000559361	FRMD5	Q7Z6J6	570 aa		18.55	■□□□□ 0.56
PSEN1-224	ENST00000559361	ZNF710	Q8N1W2	664 aa		18.55	■□□□□ 0.56
PSEN1-224	ENST00000559361	PLCD3	Q8N3E9	789 aa		18.55	■□□□□ 0.56
PSEN1-224	ENST00000559361	LINC01465	Q8N7H1	131 aa		18.55	■□□□□ 0.56
PSEN1-224	ENST00000559361	NKD2	Q969F2	451 aa	Predicted RBP	18.55	■□□□□ 0.56
PSEN1-224	ENST00000559361	PPP1R16B	Q96T49	567 aa		18.55	■□□□□ 0.56
PSEN1-224	ENST00000559361	TNMD	Q9H2S6	317 aa		18.55	■□□□□ 0.56
PSEN1-224	ENST00000559361	ADAMTS10	Q9H324	1103 aa		18.55	■□□□□ 0.56
PSEN1-224	ENST00000559361	LMBRD1	Q9NUN5	540 aa		18.55	■□□□□ 0.56
PSEN1-224	ENST00000559361	LIMD1	Q9UGP4	676 aa		18.55	■□□□□ 0.56
PSEN1-224	ENST00000559361	TPR	P12270	2363 aa	Known RBP	18.55	■□□□□ 0.56
PSEN1-224	ENST00000559361	OTOGL	Q3ZCN5	2332 aa		18.55	■□□□□ 0.56
PSEN1-224	ENST00000559361	MYL1	P05976	194 aa		18.54	■□□□□ 0.56
PSEN1-224	ENST00000559361	SLFN14	P0C7P3	912 aa		18.54	■□□□□ 0.56
PSEN1-224	ENST00000559361	PLA2G4B	P0C869	781 aa		18.54	■□□□□ 0.56
PSEN1-224	ENST00000559361	MCM4	P33991	863 aa		18.54	■□□□□ 0.56
PSEN1-224	ENST00000559361	ID4	P47928	161 aa		18.54	■□□□□ 0.56
PSEN1-224	ENST00000559361	TBC1D8B	Q0IIM8	1120 aa		18.54	■□□□□ 0.56
PSEN1-224	ENST00000559361	CWF19L1	Q69YN2	538 aa	Known RBP	18.54	■□□□□ 0.56
PSEN1-224	ENST00000559361	SV2B	Q7L1I2	683 aa		18.54	■□□□□ 0.56
PSEN1-224	ENST00000559361	ZNF598	Q86UK7	904 aa	Known RBP	18.54	■□□□□ 0.56
PSEN1-224	ENST00000559361	PDILT	Q8N807	584 aa		18.54	■□□□□ 0.56
PSEN1-224	ENST00000559361	MCPH1	Q8NEM0	835 aa		18.54	■□□□□ 0.56
PSEN1-224	ENST00000559361	DHX58	Q96C10	678 aa		18.54	■□□□□ 0.56
PSEN1-224	ENST00000559361	TIGD1	Q96MW7	591 aa		18.54	■□□□□ 0.56
PSEN1-224	ENST00000559361	BLOC1S4	Q9NUP1	217 aa		18.54	■□□□□ 0.56
PSEN1-224	ENST00000559361	HOOK1	Q9UJC3	728 aa	Known RBP	18.54	■□□□□ 0.56
PSEN1-224	ENST00000559361	IRAK3	Q9Y616	596 aa		18.54	■□□□□ 0.56
PSEN1-224	ENST00000559361		A0A087X0B3	334 aa		18.53	■□□□□ 0.56
PSEN1-224	ENST00000559361		E9PMD0	336 aa		18.53	■□□□□ 0.56
PSEN1-224	ENST00000559361	MAF	O75444	373 aa	Predicted RBP	18.53	■□□□□ 0.56
PSEN1-224	ENST00000559361	MBD3	O95983	291 aa		18.53	■□□□□ 0.56
PSEN1-224	ENST00000559361	WEE2	P0C1S8	567 aa		18.53	■□□□□ 0.56
PSEN1-224	ENST00000559361	TMOD1	P28289	359 aa		18.53	■□□□□ 0.56
PSEN1-224	ENST00000559361	POLG	P54098	1239 aa	Predicted RBP	18.53	■□□□□ 0.56
PSEN1-224	ENST00000559361	SLC12A3	P55017	1021 aa		18.53	■□□□□ 0.56
PSEN1-224	ENST00000559361	CACNA1B	Q00975	2339 aa		18.53	■□□□□ 0.56
PSEN1-224	ENST00000559361	MTERF2	Q49AM1	385 aa		18.53	■□□□□ 0.56
PSEN1-224	ENST00000559361	ATAT1	Q5SQI0	421 aa		18.53	■□□□□ 0.56
PSEN1-224	ENST00000559361	PLA2G4F	Q68DD2	849 aa		18.53	■□□□□ 0.56
PSEN1-224	ENST00000559361	KCNK18	Q7Z418	384 aa		18.53	■□□□□ 0.56
PSEN1-224	ENST00000559361	ELOA2	Q8IYF1	753 aa	Predicted RBP	18.53	■□□□□ 0.56
PSEN1-224	ENST00000559361	ABI1	Q8IZP0	508 aa		18.53	■□□□□ 0.56
PSEN1-224	ENST00000559361	FMR1NB	Q8N0W7	255 aa	Predicted RBP	18.53	■□□□□ 0.56
PSEN1-224	ENST00000559361	ADSSL1	Q8N142	457 aa		18.53	■□□□□ 0.56
PSEN1-224	ENST00000559361	TDRD5	Q8NAT2	981 aa	Known RBP	18.53	■□□□□ 0.56
PSEN1-224	ENST00000559361	GOLPH3L	Q9H4A5	285 aa		18.53	■□□□□ 0.56
PSEN1-224	ENST00000559361	DHX33	Q9H6R0	707 aa	Known RBP	18.53	■□□□□ 0.56
PSEN1-224	ENST00000559361	BMP2K	Q9NSY1	1161 aa	Predicted RBP	18.53	■□□□□ 0.56
PSEN1-224	ENST00000559361	DZANK1	Q9NVP4	752 aa		18.53	■□□□□ 0.56
PSEN1-224	ENST00000559361	NCOR2	Q9Y618	2525 aa		18.53	■□□□□ 0.56
PSEN1-224	ENST00000559361		A0A0U1RQF3	1178 aa		18.52	■□□□□ 0.56
PSEN1-224	ENST00000559361	KIN	O60870	393 aa	Known RBP	18.52	■□□□□ 0.56
PSEN1-224	ENST00000559361	GADD45B	O75293	160 aa	Predicted RBP	18.52	■□□□□ 0.56
PSEN1-224	ENST00000559361	ZNF202	O95125	648 aa		18.52	■□□□□ 0.56
PSEN1-224	ENST00000559361	CXCL14	O95715	111 aa		18.52	■□□□□ 0.56
PSEN1-224	ENST00000559361	EOMES	O95936	686 aa		18.52	■□□□□ 0.56
PSEN1-224	ENST00000559361	ZSCAN20	P17040	1043 aa	Predicted RBP	18.52	■□□□□ 0.56
PSEN1-224	ENST00000559361	NPR3	P17342	541 aa		18.52	■□□□□ 0.56
PSEN1-224	ENST00000559361	EIF4B	P23588	611 aa	Known RBP	18.52	■□□□□ 0.56
PSEN1-224	ENST00000559361	GUCY2C	P25092	1073 aa		18.52	■□□□□ 0.56
PSEN1-224	ENST00000559361	DNM2	P50570	870 aa		18.52	■□□□□ 0.56
PSEN1-224	ENST00000559361	NLRP11	P59045	1033 aa	Known RBP	18.52	■□□□□ 0.56
PSEN1-224	ENST00000559361	CDC42EP1	Q00587	391 aa		18.52	■□□□□ 0.56
PSEN1-224	ENST00000559361	RARS2	Q5T160	578 aa	Known RBP	18.52	■□□□□ 0.56
PSEN1-224	ENST00000559361	PADI6	Q6TGC4	694 aa		18.52	■□□□□ 0.56
PSEN1-224	ENST00000559361	TRMT1L	Q7Z2T5	733 aa	Known RBP	18.52	■□□□□ 0.56
PSEN1-224	ENST00000559361	METTL13	Q8N6R0	699 aa		18.52	■□□□□ 0.56
PSEN1-224	ENST00000559361	C12orf76	Q8N812	135 aa	Predicted RBP	18.52	■□□□□ 0.56
PSEN1-224	ENST00000559361	ENGASE	Q8NFI3	743 aa		18.52	■□□□□ 0.56
PSEN1-224	ENST00000559361	SLC22A17	Q8WUG5	538 aa		18.52	■□□□□ 0.56
PSEN1-224	ENST00000559361	TCP11	Q8WWU5	503 aa		18.52	■□□□□ 0.56
PSEN1-224	ENST00000559361	CEP89	Q96ST8	783 aa		18.52	■□□□□ 0.56

Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms