RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 GPD1LQ8N335 351 aa19.73■□□□□ 0.75
CLPX-203ENST00000558958 USP38Q8NB14 1042 aa19.73■□□□□ 0.75
CLPX-203ENST00000558958 SAAL1Q96ER3 474 aa19.73■□□□□ 0.75
CLPX-203ENST00000558958 CDT1Q9H211 546 aa19.73■□□□□ 0.75
CLPX-203ENST00000558958 LIMA1Q9UHB6 759 aaKnown RBP19.73■□□□□ 0.75
CLPX-203ENST00000558958 TBX21Q9UL17 535 aa19.73■□□□□ 0.75
CLPX-203ENST00000558958 GOLGA8IPA6NC78 632 aa19.72■□□□□ 0.75
CLPX-203ENST00000558958 GOLGA8JA6NMD2 632 aa19.72■□□□□ 0.75
CLPX-203ENST00000558958 GPR182O15218 404 aa19.72■□□□□ 0.75
CLPX-203ENST00000558958 MAPK13O15264 365 aa19.72■□□□□ 0.75
CLPX-203ENST00000558958 AP5Z1O43299 807 aa19.72■□□□□ 0.75
CLPX-203ENST00000558958 EXTL3O43909 919 aa19.72■□□□□ 0.75
CLPX-203ENST00000558958 FAM189A1O60320 539 aa19.72■□□□□ 0.75
CLPX-203ENST00000558958 FANCCQ00597 558 aa19.72■□□□□ 0.75
CLPX-203ENST00000558958 KRT31Q15323 416 aa19.72■□□□□ 0.75
CLPX-203ENST00000558958 CCDC40Q4G0X9 1142 aa19.72■□□□□ 0.75
CLPX-203ENST00000558958 COL13A1Q5TAT6 717 aaPredicted RBP19.72■□□□□ 0.75
CLPX-203ENST00000558958 APTXQ7Z2E3 356 aaKnown RBP19.72■□□□□ 0.75
CLPX-203ENST00000558958 CREBRFQ8IUR6 639 aa19.72■□□□□ 0.75
CLPX-203ENST00000558958 FAM186BQ8IYM0 893 aa19.72■□□□□ 0.75
CLPX-203ENST00000558958 BORCS6Q96GS4 357 aa19.72■□□□□ 0.75
CLPX-203ENST00000558958 HIPK3Q9H422 1215 aa19.72■□□□□ 0.75
CLPX-203ENST00000558958 KIAA1586Q9HCI6 787 aa19.72■□□□□ 0.75
CLPX-203ENST00000558958 ERVK-5Q9HDB9 667 aa19.72■□□□□ 0.75
CLPX-203ENST00000558958 PADI3Q9ULW8 664 aa19.72■□□□□ 0.75
CLPX-203ENST00000558958 PIN4Q9Y237 131 aaKnown RBP19.72■□□□□ 0.75
CLPX-203ENST00000558958 RBAK-RBAKDNI3L0D1 243 aa19.71■□□□□ 0.75
CLPX-203ENST00000558958 OGTO15294 1046 aa19.71■□□□□ 0.75
CLPX-203ENST00000558958 LDHAP00338 332 aaKnown RBP19.71■□□□□ 0.75
CLPX-203ENST00000558958 CLTBP09497 229 aa19.71■□□□□ 0.75
CLPX-203ENST00000558958 MCF2P10911 925 aa19.71■□□□□ 0.75
CLPX-203ENST00000558958 HARSP12081 509 aaKnown RBP19.71■□□□□ 0.75
CLPX-203ENST00000558958 CD52P31358 61 aa19.71■□□□□ 0.75
CLPX-203ENST00000558958 NFX1Q12986 1120 aaKnown RBP19.71■□□□□ 0.75
CLPX-203ENST00000558958 PAK2Q13177 524 aa19.71■□□□□ 0.75
CLPX-203ENST00000558958 SNRNP35Q16560 246 aaKnown RBP19.71■□□□□ 0.75
CLPX-203ENST00000558958 SLC27A1Q6PCB7 646 aa19.71■□□□□ 0.75
CLPX-203ENST00000558958 SARM1Q6SZW1 724 aa19.71■□□□□ 0.75
CLPX-203ENST00000558958 CRELD2Q6UXH1 353 aaPredicted RBP19.71■□□□□ 0.75
CLPX-203ENST00000558958 CBWD2Q8IUF1 395 aa19.71■□□□□ 0.75
CLPX-203ENST00000558958 RDH13Q8NBN7 331 aa19.71■□□□□ 0.75
CLPX-203ENST00000558958 ANKRD20A12PQ8NF67 263 aa19.71■□□□□ 0.75
CLPX-203ENST00000558958 FAM213AQ9BRX8 229 aa19.71■□□□□ 0.75
CLPX-203ENST00000558958 METTL14Q9HCE5 456 aaKnown RBP19.71■□□□□ 0.75
CLPX-203ENST00000558958 ARMCX3Q9UH62 379 aaPredicted RBP19.71■□□□□ 0.75
CLPX-203ENST00000558958 MKI67P46013 3256 aaKnown RBP19.7■□□□□ 0.74
CLPX-203ENST00000558958 SERPINC1P01008 464 aa19.7■□□□□ 0.74
CLPX-203ENST00000558958 MTIF2P46199 727 aaKnown RBP19.7■□□□□ 0.74
CLPX-203ENST00000558958 PLCB2Q00722 1185 aa19.7■□□□□ 0.74
CLPX-203ENST00000558958 HSP90AA2PQ14568 343 aaPredicted RBP19.7■□□□□ 0.74
CLPX-203ENST00000558958 DCAF4L1Q3SXM0 396 aa19.7■□□□□ 0.74
CLPX-203ENST00000558958 TRIM59Q8IWR1 403 aa19.7■□□□□ 0.74
CLPX-203ENST00000558958 CCDC51Q96ER9 411 aa19.7■□□□□ 0.74
CLPX-203ENST00000558958 ADPGKQ9BRR6 497 aa19.7■□□□□ 0.74
CLPX-203ENST00000558958 TUBGCP2Q9BSJ2 902 aa19.7■□□□□ 0.74
CLPX-203ENST00000558958 CHST12Q9NRB3 414 aa19.7■□□□□ 0.74
CLPX-203ENST00000558958 TMEM39AQ9NV64 488 aa19.7■□□□□ 0.74
CLPX-203ENST00000558958 UMODL1Q5DID0 1318 aa19.7■□□□□ 0.74
CLPX-203ENST00000558958 ADRB2P07550 413 aa19.69■□□□□ 0.74
CLPX-203ENST00000558958 ACOT2P49753 483 aa19.69■□□□□ 0.74
CLPX-203ENST00000558958 MCCD1P59942 119 aaPredicted RBP19.69■□□□□ 0.74
CLPX-203ENST00000558958 ZBTB41Q5SVQ8 909 aa19.69■□□□□ 0.74
CLPX-203ENST00000558958 APBB1IPQ7Z5R6 666 aaPredicted RBP19.69■□□□□ 0.74
CLPX-203ENST00000558958 MFSD14AQ96MC6 490 aa19.69■□□□□ 0.74
CLPX-203ENST00000558958 TAB2Q9NYJ8 693 aa19.69■□□□□ 0.74
CLPX-203ENST00000558958 ZNF233A6NK53 670 aa19.68■□□□□ 0.74
CLPX-203ENST00000558958 COPB1P53618 953 aaKnown RBP19.68■□□□□ 0.74
CLPX-203ENST00000558958 GPNMBQ14956 572 aa19.68■□□□□ 0.74
CLPX-203ENST00000558958 SEZ6Q53EL9 994 aa19.68■□□□□ 0.74
CLPX-203ENST00000558958 UBXN11Q5T124 520 aa19.68■□□□□ 0.74
CLPX-203ENST00000558958 INTS8Q75QN2 995 aaKnown RBP19.68■□□□□ 0.74
CLPX-203ENST00000558958 THNSL1Q8IYQ7 743 aa19.68■□□□□ 0.74
CLPX-203ENST00000558958 NAP1L5Q96NT1 182 aaPredicted RBP19.68■□□□□ 0.74
CLPX-203ENST00000558958 EIF2AQ9BY44 585 aaKnown RBP19.68■□□□□ 0.74
CLPX-203ENST00000558958 WNT8AQ9H1J5 351 aa19.68■□□□□ 0.74
CLPX-203ENST00000558958 TMX1Q9H3N1 280 aa19.68■□□□□ 0.74
CLPX-203ENST00000558958 NBNO60934 754 aa19.67■□□□□ 0.74
CLPX-203ENST00000558958 PARNO95453 639 aaKnown RBP19.67■□□□□ 0.74
CLPX-203ENST00000558958 NPTXRO95502 500 aa19.67■□□□□ 0.74
CLPX-203ENST00000558958 PRKCSHP14314 528 aaPredicted RBP19.67■□□□□ 0.74
CLPX-203ENST00000558958 CYP2C18P33260 490 aa19.67■□□□□ 0.74
CLPX-203ENST00000558958 TNFSF9P41273 254 aa19.67■□□□□ 0.74
CLPX-203ENST00000558958 UBASH3AP57075 661 aa19.67■□□□□ 0.74
CLPX-203ENST00000558958 CYP24A1Q07973 514 aa19.67■□□□□ 0.74
CLPX-203ENST00000558958 MAN2A1Q16706 1144 aa19.67■□□□□ 0.74
CLPX-203ENST00000558958 KYAT1Q16773 422 aa19.67■□□□□ 0.74
CLPX-203ENST00000558958 CEP120Q8N960 986 aa19.67■□□□□ 0.74
CLPX-203ENST00000558958 ABHD8Q96I13 439 aa19.67■□□□□ 0.74
CLPX-203ENST00000558958 IFIH1Q9BYX4 1025 aaKnown RBP19.67■□□□□ 0.74
CLPX-203ENST00000558958 PPP1R12CQ9BZL4 782 aa19.67■□□□□ 0.74
CLPX-203ENST00000558958 VPS16Q9H269 839 aa19.67■□□□□ 0.74
CLPX-203ENST00000558958 IFNKQ9P0W0 207 aa19.67■□□□□ 0.74
CLPX-203ENST00000558958 CPSF3Q9UKF6 684 aaKnown RBP19.67■□□□□ 0.74
CLPX-203ENST00000558958 A0A1B0GTH6 734 aa19.67■□□□□ 0.74
CLPX-203ENST00000558958 KRT13P13646 458 aa19.67■□□□□ 0.74
CLPX-203ENST00000558958 ENPEPQ07075 957 aa19.67■□□□□ 0.74
CLPX-203ENST00000558958 BFSP1Q12934 665 aa19.67■□□□□ 0.74
CLPX-203ENST00000558958 DSC3Q14574 896 aa19.67■□□□□ 0.74
CLPX-203ENST00000558958 MIIPQ5JXC2 388 aa19.67■□□□□ 0.74
CLPX-203ENST00000558958 TWF2Q6IBS0 349 aaKnown RBP19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms