RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 NMT1P30419 496 aaKnown RBP9.93□□□□□ -0.82
CHD8-214ENST00000557727 HOXD13P35453 343 aa9.93□□□□□ -0.82
CHD8-214ENST00000557727 GTF2BQ00403 316 aa9.93□□□□□ -0.82
CHD8-214ENST00000557727 KCNA1Q09470 495 aa9.93□□□□□ -0.82
CHD8-214ENST00000557727 NFX1Q12986 1120 aaKnown RBP9.93□□□□□ -0.82
CHD8-214ENST00000557727 COASYQ13057 564 aa9.93□□□□□ -0.82
CHD8-214ENST00000557727 DMP1Q13316 513 aaPredicted RBP9.93□□□□□ -0.82
CHD8-214ENST00000557727 PCBP1Q15365 356 aaKnown RBP eCLIP9.93□□□□□ -0.82
CHD8-214ENST00000557727 CSPP1Q1MSJ5 1256 aa9.93□□□□□ -0.82
CHD8-214ENST00000557727 ODR4Q5SWX8 454 aa9.93□□□□□ -0.82
CHD8-214ENST00000557727 SLC39A4Q6P5W5 647 aa9.93□□□□□ -0.82
CHD8-214ENST00000557727 FAM43BQ6ZT52 329 aaPredicted RBP9.93□□□□□ -0.82
CHD8-214ENST00000557727 UNC13DQ70J99 1090 aa9.93□□□□□ -0.82
CHD8-214ENST00000557727 EPM2AIP1Q7L775 607 aaPredicted RBP9.93□□□□□ -0.82
CHD8-214ENST00000557727 ZNF720Q7Z2F6 126 aa9.93□□□□□ -0.82
CHD8-214ENST00000557727 SPATA20Q8TB22 786 aa9.93□□□□□ -0.82
CHD8-214ENST00000557727 IFT74Q96LB3 600 aa9.93□□□□□ -0.82
CHD8-214ENST00000557727 PRIMPOLQ96LW4 560 aa9.93□□□□□ -0.82
CHD8-214ENST00000557727 TIGD1Q96MW7 591 aa9.93□□□□□ -0.82
CHD8-214ENST00000557727 SCLT1Q96NL6 688 aa9.93□□□□□ -0.82
CHD8-214ENST00000557727 ADAM2Q99965 735 aa9.93□□□□□ -0.82
CHD8-214ENST00000557727 FTHL17Q9BXU8 183 aa9.93□□□□□ -0.82
CHD8-214ENST00000557727 C2orf40Q9H1Z8 148 aa9.93□□□□□ -0.82
CHD8-214ENST00000557727 IKZF4Q9H2S9 585 aa9.93□□□□□ -0.82
CHD8-214ENST00000557727 KMT5AQ9NQR1 393 aa9.93□□□□□ -0.82
CHD8-214ENST00000557727 AAASQ9NRG9 546 aa9.93□□□□□ -0.82
CHD8-214ENST00000557727 RNF19AQ9NV58 838 aa9.93□□□□□ -0.82
CHD8-214ENST00000557727 SLC27A5Q9Y2P5 690 aa9.93□□□□□ -0.82
CHD8-214ENST00000557727 ZMYM2Q9UBW7 1377 aa9.92□□□□□ -0.82
CHD8-214ENST00000557727 PVALEFA0A1B0GWK0 134 aa9.92□□□□□ -0.82
CHD8-214ENST00000557727 A0A1W2PPC1 479 aa9.92□□□□□ -0.82
CHD8-214ENST00000557727 DENND3A2RUS2 1198 aa9.92□□□□□ -0.82
CHD8-214ENST00000557727 CCDC169A6NNP5 214 aa9.92□□□□□ -0.82
CHD8-214ENST00000557727 MEIS3P2A8K0S8 358 aa9.92□□□□□ -0.82
CHD8-214ENST00000557727 GRXCR1A8MXD5 290 aa9.92□□□□□ -0.82
CHD8-214ENST00000557727 INO80B-WBP1J3KQ70 363 aa9.92□□□□□ -0.82
CHD8-214ENST00000557727 ACKR2O00590 384 aa9.92□□□□□ -0.82
CHD8-214ENST00000557727 TRAK2O60296 914 aa9.92□□□□□ -0.82
CHD8-214ENST00000557727 TBCAO75347 108 aaKnown RBP9.92□□□□□ -0.82
CHD8-214ENST00000557727 FAM13AO94988 1023 aa9.92□□□□□ -0.82
CHD8-214ENST00000557727 PRKCBP05771 671 aa9.92□□□□□ -0.82
CHD8-214ENST00000557727 MYBP10242 640 aa9.92□□□□□ -0.82
CHD8-214ENST00000557727 GAP43P17677 238 aa9.92□□□□□ -0.82
CHD8-214ENST00000557727 EFNA5P52803 228 aa9.92□□□□□ -0.82
CHD8-214ENST00000557727 FOXC1Q12948 553 aa9.92□□□□□ -0.82
CHD8-214ENST00000557727 IKBKEQ14164 716 aa9.92□□□□□ -0.82
CHD8-214ENST00000557727 ZC2HC1CQ53FD0 456 aaPredicted RBP9.92□□□□□ -0.82
CHD8-214ENST00000557727 EEF1DP3Q658K8 133 aa9.92□□□□□ -0.82
CHD8-214ENST00000557727 BRICD5Q6PL45 260 aa9.92□□□□□ -0.82
CHD8-214ENST00000557727 CATSPER4Q7RTX7 472 aa9.92□□□□□ -0.82
CHD8-214ENST00000557727 HAUS6Q7Z4H7 955 aa9.92□□□□□ -0.82
CHD8-214ENST00000557727 CDR2LQ86X02 465 aaPredicted RBP9.92□□□□□ -0.82
CHD8-214ENST00000557727 ELOA2Q8IYF1 753 aaPredicted RBP9.92□□□□□ -0.82
CHD8-214ENST00000557727 CEP57L1Q8IYX8 460 aa9.92□□□□□ -0.82
CHD8-214ENST00000557727 MYCT1Q8N699 235 aa9.92□□□□□ -0.82
CHD8-214ENST00000557727 DEPTORQ8TB45 409 aa9.92□□□□□ -0.82
CHD8-214ENST00000557727 GPT2Q8TD30 523 aa9.92□□□□□ -0.82
CHD8-214ENST00000557727 TOP1MTQ969P6 601 aa9.92□□□□□ -0.82
CHD8-214ENST00000557727 CPB2Q96IY4 423 aa9.92□□□□□ -0.82
CHD8-214ENST00000557727 RNPC3Q96LT9 517 aaKnown RBP9.92□□□□□ -0.82
CHD8-214ENST00000557727 EIF2AQ9BY44 585 aaKnown RBP9.92□□□□□ -0.82
CHD8-214ENST00000557727 INO80BQ9C086 356 aaPredicted RBP9.92□□□□□ -0.82
CHD8-214ENST00000557727 HAPLN2Q9GZV7 340 aa9.92□□□□□ -0.82
CHD8-214ENST00000557727 PDZD7Q9H5P4 517 aa9.92□□□□□ -0.82
CHD8-214ENST00000557727 CHST12Q9NRB3 414 aa9.92□□□□□ -0.82
CHD8-214ENST00000557727 PANK4Q9NVE7 773 aa9.92□□□□□ -0.82
CHD8-214ENST00000557727 PRMT7Q9NVM4 692 aaPredicted RBP9.92□□□□□ -0.82
CHD8-214ENST00000557727 DACT1Q9NYF0 836 aa9.92□□□□□ -0.82
CHD8-214ENST00000557727 LARSQ9P2J5 1176 aaKnown RBP9.92□□□□□ -0.82
CHD8-214ENST00000557727 SEL1LQ9UBV2 794 aa9.92□□□□□ -0.82
CHD8-214ENST00000557727 FCF1Q9Y324 198 aaKnown RBP9.92□□□□□ -0.82
CHD8-214ENST00000557727 PLXNA4Q9HCM2 1894 aa9.91□□□□□ -0.82
CHD8-214ENST00000557727 COL4A4P53420 1690 aaPredicted RBP9.91□□□□□ -0.82
CHD8-214ENST00000557727 A0A0U1RQF3 1178 aa9.91□□□□□ -0.82
CHD8-214ENST00000557727 GOLGA6L4A6NEF3 574 aa9.91□□□□□ -0.82
CHD8-214ENST00000557727 SOX1O00570 391 aaPredicted RBP9.91□□□□□ -0.82
CHD8-214ENST00000557727 MEFVO15553 781 aaPredicted RBP9.91□□□□□ -0.82
CHD8-214ENST00000557727 FAM189A1O60320 539 aa9.91□□□□□ -0.82
CHD8-214ENST00000557727 EFCAB14O75071 495 aa9.91□□□□□ -0.82
CHD8-214ENST00000557727 ZNF623O75123 536 aa9.91□□□□□ -0.82
CHD8-214ENST00000557727 ARHGEF15O94989 841 aa9.91□□□□□ -0.82
CHD8-214ENST00000557727 PIGRP01833 764 aa9.91□□□□□ -0.82
CHD8-214ENST00000557727 KRT18P05783 430 aaKnown RBP9.91□□□□□ -0.82
CHD8-214ENST00000557727 MYL1P05976 194 aa9.91□□□□□ -0.82
CHD8-214ENST00000557727 LINC00271P0C7V0 271 aa9.91□□□□□ -0.82
CHD8-214ENST00000557727 ACTN1P12814 892 aa9.91□□□□□ -0.82
CHD8-214ENST00000557727 IDEP14735 1019 aa9.91□□□□□ -0.82
CHD8-214ENST00000557727 AXLP30530 894 aa9.91□□□□□ -0.82
CHD8-214ENST00000557727 SARSP49591 514 aaKnown RBP9.91□□□□□ -0.82
CHD8-214ENST00000557727 ASIC1P78348 528 aa9.91□□□□□ -0.82
CHD8-214ENST00000557727 HTRA4P83105 476 aaPredicted RBP9.91□□□□□ -0.82
CHD8-214ENST00000557727 PLCB2Q00722 1185 aa9.91□□□□□ -0.82
CHD8-214ENST00000557727 AMPD3Q01432 767 aa9.91□□□□□ -0.82
CHD8-214ENST00000557727 PNOCQ13519 176 aa9.91□□□□□ -0.82
CHD8-214ENST00000557727 MAPK6Q16659 721 aa9.91□□□□□ -0.82
CHD8-214ENST00000557727 LRIT3Q3SXY7 679 aa9.91□□□□□ -0.82
CHD8-214ENST00000557727 SLC24A5Q71RS6 500 aa9.91□□□□□ -0.82
CHD8-214ENST00000557727 MRPL10Q7Z7H8 261 aaKnown RBP9.91□□□□□ -0.82
CHD8-214ENST00000557727 MAP4K3Q8IVH8 894 aa9.91□□□□□ -0.82
CHD8-214ENST00000557727 HERC6Q8IVU3 1022 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms