RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 UBE3AQ05086 875 aa13.74□□□□□ -0.21
SLIRP-211ENST00000557623 STRN3Q13033 797 aa13.74□□□□□ -0.21
SLIRP-211ENST00000557623 GIT2Q14161 759 aa13.74□□□□□ -0.21
SLIRP-211ENST00000557623 CCDC85BQ15834 202 aaPredicted RBP13.74□□□□□ -0.21
SLIRP-211ENST00000557623 DCAF4L1Q3SXM0 396 aa13.74□□□□□ -0.21
SLIRP-211ENST00000557623 TIGD5Q53EQ6 642 aa13.74□□□□□ -0.21
SLIRP-211ENST00000557623 ATF7IP2Q5U623 682 aa13.74□□□□□ -0.21
SLIRP-211ENST00000557623 LRRC55Q6ZSA7 311 aa13.74□□□□□ -0.21
SLIRP-211ENST00000557623 THNSL1Q8IYQ7 743 aa13.74□□□□□ -0.21
SLIRP-211ENST00000557623 KLHL23Q8NBE8 558 aa13.74□□□□□ -0.21
SLIRP-211ENST00000557623 PPM1EQ8WY54 764 aa13.74□□□□□ -0.21
SLIRP-211ENST00000557623 KHSRPQ92945 711 aaKnown RBP eCLIP13.74□□□□□ -0.21
SLIRP-211ENST00000557623 ZNF558Q96NG5 402 aa13.74□□□□□ -0.21
SLIRP-211ENST00000557623 CUEDC2Q9H467 287 aa13.74□□□□□ -0.21
SLIRP-211ENST00000557623 PDZD7Q9H5P4 517 aa13.74□□□□□ -0.21
SLIRP-211ENST00000557623 PARVGQ9HBI0 331 aa13.74□□□□□ -0.21
SLIRP-211ENST00000557623 RCOR1Q9UKL0 485 aa13.74□□□□□ -0.21
SLIRP-211ENST00000557623 PLAGL2Q9UPG8 496 aa13.74□□□□□ -0.21
SLIRP-211ENST00000557623 INPP5FQ9Y2H2 1132 aa13.74□□□□□ -0.21
SLIRP-211ENST00000557623 GIT1Q9Y2X7 761 aa13.74□□□□□ -0.21
SLIRP-211ENST00000557623 ZDHHC9Q9Y397 364 aa13.74□□□□□ -0.21
SLIRP-211ENST00000557623 CITO14578 2027 aa13.74□□□□□ -0.21
SLIRP-211ENST00000557623 PRRC2BQ5JSZ5 2229 aaKnown RBP13.74□□□□□ -0.21
SLIRP-211ENST00000557623 TRIP11Q15643 1979 aa13.73□□□□□ -0.21
SLIRP-211ENST00000557623 CHD9Q3L8U1 2897 aa13.73□□□□□ -0.21
SLIRP-211ENST00000557623 MEIS3P2A8K0S8 358 aa13.73□□□□□ -0.21
SLIRP-211ENST00000557623 GRM6O15303 877 aa13.73□□□□□ -0.21
SLIRP-211ENST00000557623 NUDT7P0C024 238 aa13.73□□□□□ -0.21
SLIRP-211ENST00000557623 ZNF131P52739 623 aa13.73□□□□□ -0.21
SLIRP-211ENST00000557623 NCKAP1LP55160 1127 aa13.73□□□□□ -0.21
SLIRP-211ENST00000557623 RNASELQ05823 741 aaKnown RBP13.73□□□□□ -0.21
SLIRP-211ENST00000557623 NT5DC1Q5TFE4 455 aa13.73□□□□□ -0.21
SLIRP-211ENST00000557623 KCNT2Q6UVM3 1135 aa13.73□□□□□ -0.21
SLIRP-211ENST00000557623 CDR2LQ86X02 465 aaPredicted RBP13.73□□□□□ -0.21
SLIRP-211ENST00000557623 MYCT1Q8N699 235 aa13.73□□□□□ -0.21
SLIRP-211ENST00000557623 SLC17A8Q8NDX2 589 aa13.73□□□□□ -0.21
SLIRP-211ENST00000557623 TMEM161BQ8NDZ6 487 aa13.73□□□□□ -0.21
SLIRP-211ENST00000557623 KCNN1Q92952 543 aa13.73□□□□□ -0.21
SLIRP-211ENST00000557623 FAM193BQ96PV7 902 aaPredicted RBP13.73□□□□□ -0.21
SLIRP-211ENST00000557623 PYM1Q9BRP8 204 aaKnown RBP13.73□□□□□ -0.21
SLIRP-211ENST00000557623 LRRC27Q9C0I9 530 aa13.73□□□□□ -0.21
SLIRP-211ENST00000557623 ZHX3Q9H4I2 956 aa13.73□□□□□ -0.21
SLIRP-211ENST00000557623 ALG13Q9NP73 1137 aaKnown RBP13.73□□□□□ -0.21
SLIRP-211ENST00000557623 TBC1D13Q9NVG8 400 aa13.73□□□□□ -0.21
SLIRP-211ENST00000557623 FAM13BQ9NYF5 915 aa13.73□□□□□ -0.21
SLIRP-211ENST00000557623 PCDHA7Q9UN72 937 aa13.73□□□□□ -0.21
SLIRP-211ENST00000557623 TNFSF13BQ9Y275 285 aa13.73□□□□□ -0.21
SLIRP-211ENST00000557623 INPPL1O15357 1258 aa13.72□□□□□ -0.21
SLIRP-211ENST00000557623 TRAK2O60296 914 aa13.72□□□□□ -0.21
SLIRP-211ENST00000557623 FGF18O76093 207 aa13.72□□□□□ -0.21
SLIRP-211ENST00000557623 ITGB1P05556 798 aa13.72□□□□□ -0.21
SLIRP-211ENST00000557623 MAPTP10636 758 aaKnown RBP13.72□□□□□ -0.21
SLIRP-211ENST00000557623 ALDH7A1P49419 539 aaKnown RBP13.72□□□□□ -0.21
SLIRP-211ENST00000557623 PLCB3Q01970 1234 aa13.72□□□□□ -0.21
SLIRP-211ENST00000557623 KRT17Q04695 432 aa13.72□□□□□ -0.21
SLIRP-211ENST00000557623 AXDND1Q5T1B0 1012 aaPredicted RBP13.72□□□□□ -0.21
SLIRP-211ENST00000557623 SHC4Q6S5L8 630 aa13.72□□□□□ -0.21
SLIRP-211ENST00000557623 PDILTQ8N807 584 aa13.72□□□□□ -0.21
SLIRP-211ENST00000557623 IQUBQ8NA54 791 aa13.72□□□□□ -0.21
SLIRP-211ENST00000557623 SPPL3Q8TCT6 385 aa13.72□□□□□ -0.21
SLIRP-211ENST00000557623 SPATA32Q96LK8 384 aa13.72□□□□□ -0.21
SLIRP-211ENST00000557623 ACO2Q99798 780 aaKnown RBP13.72□□□□□ -0.21
SLIRP-211ENST00000557623 APOL6Q9BWW8 343 aa13.72□□□□□ -0.21
SLIRP-211ENST00000557623 PANK2Q9BZ23 570 aa13.72□□□□□ -0.21
SLIRP-211ENST00000557623 SCAND2PQ9GZW5 306 aaPredicted RBP13.72□□□□□ -0.21
SLIRP-211ENST00000557623 NXF3Q9H4D5 531 aaKnown RBP13.72□□□□□ -0.21
SLIRP-211ENST00000557623 NSUN3Q9H649 340 aaKnown RBP13.72□□□□□ -0.21
SLIRP-211ENST00000557623 SPG21Q9NZD8 308 aa13.72□□□□□ -0.21
SLIRP-211ENST00000557623 HCSTQ9UBK5 93 aa13.72□□□□□ -0.21
SLIRP-211ENST00000557623 PARP2Q9UGN5 583 aa13.72□□□□□ -0.21
SLIRP-211ENST00000557623 PUF60Q9UHX1 559 aaKnown RBP13.72□□□□□ -0.21
SLIRP-211ENST00000557623 LZTS1Q9Y250 596 aa13.72□□□□□ -0.21
SLIRP-211ENST00000557623 HES2Q9Y543 173 aa13.72□□□□□ -0.21
SLIRP-211ENST00000557623 A0A087X0B3 334 aa13.71□□□□□ -0.21
SLIRP-211ENST00000557623 ARL5CA6NH57 179 aa13.71□□□□□ -0.21
SLIRP-211ENST00000557623 K7ENM7 598 aa13.71□□□□□ -0.21
SLIRP-211ENST00000557623 ZC3H11AO75152 810 aaKnown RBP eCLIP13.71□□□□□ -0.21
SLIRP-211ENST00000557623 EDN1P05305 212 aa13.71□□□□□ -0.21
SLIRP-211ENST00000557623 GAP43P17677 238 aa13.71□□□□□ -0.21
SLIRP-211ENST00000557623 BCAR1P56945 870 aa13.71□□□□□ -0.21
SLIRP-211ENST00000557623 AMPD3Q01432 767 aa13.71□□□□□ -0.21
SLIRP-211ENST00000557623 CAMK2BQ13554 666 aa13.71□□□□□ -0.21
SLIRP-211ENST00000557623 SKIV2LQ15477 1246 aaKnown RBP13.71□□□□□ -0.21
SLIRP-211ENST00000557623 RESP18Q5W5W9 173 aa13.71□□□□□ -0.21
SLIRP-211ENST00000557623 PDE12Q6L8Q7 609 aaKnown RBP13.71□□□□□ -0.21
SLIRP-211ENST00000557623 ZPBP2Q6X784 338 aa13.71□□□□□ -0.21
SLIRP-211ENST00000557623 DYMQ7RTS9 669 aa13.71□□□□□ -0.21
SLIRP-211ENST00000557623 TAS1R3Q7RTX0 852 aa13.71□□□□□ -0.21
SLIRP-211ENST00000557623 HAUS6Q7Z4H7 955 aa13.71□□□□□ -0.21
SLIRP-211ENST00000557623 FAM178BQ8IXR5 827 aa13.71□□□□□ -0.21
SLIRP-211ENST00000557623 LEO1Q8WVC0 666 aaPredicted RBP13.71□□□□□ -0.21
SLIRP-211ENST00000557623 POF1BQ8WVV4 589 aa13.71□□□□□ -0.21
SLIRP-211ENST00000557623 MRPS27Q92552 414 aaKnown RBP13.71□□□□□ -0.21
SLIRP-211ENST00000557623 DDX12PQ92771 950 aa13.71□□□□□ -0.21
SLIRP-211ENST00000557623 PPP2R3CQ969Q6 453 aa13.71□□□□□ -0.21
SLIRP-211ENST00000557623 RPS6KC1Q96S38 1066 aa13.71□□□□□ -0.21
SLIRP-211ENST00000557623 GAD1Q99259 594 aa13.71□□□□□ -0.21
SLIRP-211ENST00000557623 TMEM175Q9BSA9 504 aa13.71□□□□□ -0.21
SLIRP-211ENST00000557623 TNMDQ9H2S6 317 aa13.71□□□□□ -0.21
SLIRP-211ENST00000557623 NRDE2Q9H7Z3 1164 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms