RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 TTLL13PA6NNM8 815 aa17.45■□□□□ 0.38
TUBB3-214ENST00000557490 H0YCG3 227 aa17.45■□□□□ 0.38
TUBB3-214ENST00000557490 TBCAO75347 108 aaKnown RBP17.45■□□□□ 0.38
TUBB3-214ENST00000557490 FGF18O76093 207 aa17.45■□□□□ 0.38
TUBB3-214ENST00000557490 PPM1AP35813 382 aa17.45■□□□□ 0.38
TUBB3-214ENST00000557490 STAT6P42226 847 aa17.45■□□□□ 0.38
TUBB3-214ENST00000557490 ALDH7A1P49419 539 aaKnown RBP17.45■□□□□ 0.38
TUBB3-214ENST00000557490 UBE3AQ05086 875 aa17.45■□□□□ 0.38
TUBB3-214ENST00000557490 DNM1Q05193 864 aaKnown RBP17.45■□□□□ 0.38
TUBB3-214ENST00000557490 STRN3Q13033 797 aa17.45■□□□□ 0.38
TUBB3-214ENST00000557490 NT5DC1Q5TFE4 455 aa17.45■□□□□ 0.38
TUBB3-214ENST00000557490 ATF7IP2Q5U623 682 aa17.45■□□□□ 0.38
TUBB3-214ENST00000557490 SV2BQ7L1I2 683 aa17.45■□□□□ 0.38
TUBB3-214ENST00000557490 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.45■□□□□ 0.38
TUBB3-214ENST00000557490 FAM193BQ96PV7 902 aaPredicted RBP17.45■□□□□ 0.38
TUBB3-214ENST00000557490 MRPL4Q9BYD3 311 aaKnown RBP17.45■□□□□ 0.38
TUBB3-214ENST00000557490 PANK2Q9BZ23 570 aa17.45■□□□□ 0.38
TUBB3-214ENST00000557490 RNF39Q9H2S5 420 aa17.45■□□□□ 0.38
TUBB3-214ENST00000557490 NXF3Q9H4D5 531 aaKnown RBP17.45■□□□□ 0.38
TUBB3-214ENST00000557490 NSUN3Q9H649 340 aaKnown RBP17.45■□□□□ 0.38
TUBB3-214ENST00000557490 PARVGQ9HBI0 331 aa17.45■□□□□ 0.38
TUBB3-214ENST00000557490 SPG21Q9NZD8 308 aa17.45■□□□□ 0.38
TUBB3-214ENST00000557490 USP20Q9Y2K6 914 aa17.45■□□□□ 0.38
TUBB3-214ENST00000557490 GIT1Q9Y2X7 761 aa17.45■□□□□ 0.38
TUBB3-214ENST00000557490 HES2Q9Y543 173 aa17.45■□□□□ 0.38
TUBB3-214ENST00000557490 C5orf42Q9H799 3197 aa17.45■□□□□ 0.38
TUBB3-214ENST00000557490 PTPRZ1P23471 2315 aaPredicted RBP17.44■□□□□ 0.38
TUBB3-214ENST00000557490 FNDC1Q4ZHG4 1894 aaPredicted RBP17.44■□□□□ 0.38
TUBB3-214ENST00000557490 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.44■□□□□ 0.38
TUBB3-214ENST00000557490 ZC3H11AO75152 810 aaKnown RBP eCLIP17.44■□□□□ 0.38
TUBB3-214ENST00000557490 CSPG5O95196 566 aa17.44■□□□□ 0.38
TUBB3-214ENST00000557490 ME1P48163 572 aa17.44■□□□□ 0.38
TUBB3-214ENST00000557490 KRT17Q04695 432 aa17.44■□□□□ 0.38
TUBB3-214ENST00000557490 GIT2Q14161 759 aa17.44■□□□□ 0.38
TUBB3-214ENST00000557490 DCAF4L1Q3SXM0 396 aa17.44■□□□□ 0.38
TUBB3-214ENST00000557490 HFE2Q6ZVN8 426 aa17.44■□□□□ 0.38
TUBB3-214ENST00000557490 MYCT1Q8N699 235 aa17.44■□□□□ 0.38
TUBB3-214ENST00000557490 POF1BQ8WVV4 589 aa17.44■□□□□ 0.38
TUBB3-214ENST00000557490 GAD1Q99259 594 aa17.44■□□□□ 0.38
TUBB3-214ENST00000557490 GBP3Q9H0R5 595 aa17.44■□□□□ 0.38
TUBB3-214ENST00000557490 ZHX3Q9H4I2 956 aa17.44■□□□□ 0.38
TUBB3-214ENST00000557490 PARP2Q9UGN5 583 aa17.44■□□□□ 0.38
TUBB3-214ENST00000557490 PUF60Q9UHX1 559 aaKnown RBP17.44■□□□□ 0.38
TUBB3-214ENST00000557490 ATP6V1DQ9Y5K8 247 aa17.44■□□□□ 0.38
TUBB3-214ENST00000557490 NLRC5Q86WI3 1866 aa17.44■□□□□ 0.38
TUBB3-214ENST00000557490 ARL5CA6NH57 179 aa17.43■□□□□ 0.38
TUBB3-214ENST00000557490 POMCP01189 267 aa17.43■□□□□ 0.38
TUBB3-214ENST00000557490 EDN1P05305 212 aa17.43■□□□□ 0.38
TUBB3-214ENST00000557490 KCNA5P22460 613 aa17.43■□□□□ 0.38
TUBB3-214ENST00000557490 AKAP5P24588 427 aa17.43■□□□□ 0.38
TUBB3-214ENST00000557490 PBX3P40426 434 aa17.43■□□□□ 0.38
TUBB3-214ENST00000557490 MLH1P40692 756 aa17.43■□□□□ 0.38
TUBB3-214ENST00000557490 BCAR1P56945 870 aa17.43■□□□□ 0.38
TUBB3-214ENST00000557490 FOXK2Q01167 660 aa17.43■□□□□ 0.38
TUBB3-214ENST00000557490 PLCB3Q01970 1234 aa17.43■□□□□ 0.38
TUBB3-214ENST00000557490 EEF1DP3Q658K8 133 aa17.43■□□□□ 0.38
TUBB3-214ENST00000557490 TMEM161BQ8NDZ6 487 aa17.43■□□□□ 0.38
TUBB3-214ENST00000557490 NRDE2Q9H7Z3 1164 aa17.43■□□□□ 0.38
TUBB3-214ENST00000557490 TNFSF13BQ9Y275 285 aa17.43■□□□□ 0.38
TUBB3-214ENST00000557490 ZDHHC9Q9Y397 364 aa17.43■□□□□ 0.38
TUBB3-214ENST00000557490 INPPL1O15357 1258 aa17.42■□□□□ 0.38
TUBB3-214ENST00000557490 MAPTP10636 758 aaKnown RBP17.42■□□□□ 0.38
TUBB3-214ENST00000557490 SCP2P22307 547 aa17.42■□□□□ 0.38
TUBB3-214ENST00000557490 DNAJB1P25685 340 aa17.42■□□□□ 0.38
TUBB3-214ENST00000557490 ZNF131P52739 623 aa17.42■□□□□ 0.38
TUBB3-214ENST00000557490 NCKAP1LP55160 1127 aa17.42■□□□□ 0.38
TUBB3-214ENST00000557490 KRT85P78386 507 aa17.42■□□□□ 0.38
TUBB3-214ENST00000557490 TCEAL5Q5H9L2 206 aa17.42■□□□□ 0.38
TUBB3-214ENST00000557490 PTCRAQ6ISU1 281 aaPredicted RBP17.42■□□□□ 0.38
TUBB3-214ENST00000557490 TAS1R3Q7RTX0 852 aa17.42■□□□□ 0.38
TUBB3-214ENST00000557490 SLC39A11Q8N1S5 342 aa17.42■□□□□ 0.38
TUBB3-214ENST00000557490 PDILTQ8N807 584 aa17.42■□□□□ 0.38
TUBB3-214ENST00000557490 MICAL1Q8TDZ2 1067 aa17.42■□□□□ 0.38
TUBB3-214ENST00000557490 MRPS27Q92552 414 aaKnown RBP17.42■□□□□ 0.38
TUBB3-214ENST00000557490 PPP2R3CQ969Q6 453 aa17.42■□□□□ 0.38
TUBB3-214ENST00000557490 RPS6KC1Q96S38 1066 aa17.42■□□□□ 0.38
TUBB3-214ENST00000557490 ACO2Q99798 780 aaKnown RBP17.42■□□□□ 0.38
TUBB3-214ENST00000557490 TARS2Q9BW92 718 aaKnown RBP17.42■□□□□ 0.38
TUBB3-214ENST00000557490 RCOR1Q9UKL0 485 aa17.42■□□□□ 0.38
TUBB3-214ENST00000557490 PCDHA7Q9UN72 937 aa17.42■□□□□ 0.38
TUBB3-214ENST00000557490 LZTS1Q9Y250 596 aa17.42■□□□□ 0.38
TUBB3-214ENST00000557490 TECTAO75443 2155 aa17.42■□□□□ 0.38
TUBB3-214ENST00000557490 ZMYM2Q9UBW7 1377 aa17.41■□□□□ 0.38
TUBB3-214ENST00000557490 A0A087X0B3 334 aa17.41■□□□□ 0.38
TUBB3-214ENST00000557490 TRAK2O60296 914 aa17.41■□□□□ 0.38
TUBB3-214ENST00000557490 GALTP07902 379 aa17.41■□□□□ 0.38
TUBB3-214ENST00000557490 SCNN1GP51170 649 aa17.41■□□□□ 0.38
TUBB3-214ENST00000557490 AFF1P51825 1210 aaKnown RBP17.41■□□□□ 0.38
TUBB3-214ENST00000557490 CAMK1Q14012 370 aa17.41■□□□□ 0.38
TUBB3-214ENST00000557490 ZNF568Q3ZCX4 644 aa17.41■□□□□ 0.38
TUBB3-214ENST00000557490 AXDND1Q5T1B0 1012 aaPredicted RBP17.41■□□□□ 0.38
TUBB3-214ENST00000557490 PDE12Q6L8Q7 609 aaKnown RBP17.41■□□□□ 0.38
TUBB3-214ENST00000557490 SHC4Q6S5L8 630 aa17.41■□□□□ 0.38
TUBB3-214ENST00000557490 DYMQ7RTS9 669 aa17.41■□□□□ 0.38
TUBB3-214ENST00000557490 HAUS6Q7Z4H7 955 aa17.41■□□□□ 0.38
TUBB3-214ENST00000557490 ZNF280BQ86YH2 543 aa17.41■□□□□ 0.38
TUBB3-214ENST00000557490 DDX12PQ92771 950 aa17.41■□□□□ 0.38
TUBB3-214ENST00000557490 TMEM169Q96HH4 297 aa17.41■□□□□ 0.38
TUBB3-214ENST00000557490 ZFP42Q96MM3 310 aa17.41■□□□□ 0.38
TUBB3-214ENST00000557490 TMEM175Q9BSA9 504 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms