RNA–Protein interactions for RNA: ENST00000557394.5

SUPT16H-207, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 2,324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-207ENST00000557394 POTEFA5A3E0 1075 aa11.21□□□□□ -0.61
SUPT16H-207ENST00000557394 KCNQ2O43526 872 aa11.21□□□□□ -0.61
SUPT16H-207ENST00000557394 ATG7O95352 703 aa11.21□□□□□ -0.61
SUPT16H-207ENST00000557394 POTEIP0CG38 1075 aa11.21□□□□□ -0.61
SUPT16H-207ENST00000557394 POTEJP0CG39 1038 aa11.21□□□□□ -0.61
SUPT16H-207ENST00000557394 SKIP12755 728 aa11.21□□□□□ -0.61
SUPT16H-207ENST00000557394 RARGP13631 454 aa11.21□□□□□ -0.61
SUPT16H-207ENST00000557394 MARSP56192 900 aaKnown RBP11.21□□□□□ -0.61
SUPT16H-207ENST00000557394 PTK2Q05397 1052 aa11.21□□□□□ -0.61
SUPT16H-207ENST00000557394 RNASELQ05823 741 aaKnown RBP11.21□□□□□ -0.61
SUPT16H-207ENST00000557394 TXNRD1Q16881 649 aa11.21□□□□□ -0.61
SUPT16H-207ENST00000557394 ZCWPW2Q504Y3 356 aa11.21□□□□□ -0.61
SUPT16H-207ENST00000557394 SPDYAQ5MJ70 313 aa11.21□□□□□ -0.61
SUPT16H-207ENST00000557394 POTEEQ6S8J3 1075 aa11.21□□□□□ -0.61
SUPT16H-207ENST00000557394 TTC8Q8TAM2 541 aa11.21□□□□□ -0.61
SUPT16H-207ENST00000557394 MIPOL1Q8TD10 442 aa11.21□□□□□ -0.61
SUPT16H-207ENST00000557394 RBM17Q96I25 401 aaKnown RBP11.21□□□□□ -0.61
SUPT16H-207ENST00000557394 MAGEB18Q96M61 343 aa11.21□□□□□ -0.61
SUPT16H-207ENST00000557394 TBC1D10AQ9BXI6 508 aa11.21□□□□□ -0.61
SUPT16H-207ENST00000557394 TANGO6Q9C0B7 1094 aa11.21□□□□□ -0.61
SUPT16H-207ENST00000557394 VCX3BQ9H321 246 aa11.21□□□□□ -0.61
SUPT16H-207ENST00000557394 MMADHCQ9H3L0 296 aaPredicted RBP11.21□□□□□ -0.61
SUPT16H-207ENST00000557394 VCX3AQ9NNX9 186 aa11.21□□□□□ -0.61
SUPT16H-207ENST00000557394 USP40Q9NVE5 1235 aa11.21□□□□□ -0.61
SUPT16H-207ENST00000557394 GMEB1Q9Y692 573 aa11.21□□□□□ -0.61
SUPT16H-207ENST00000557394 ARAP2Q8WZ64 1704 aa11.21□□□□□ -0.61
SUPT16H-207ENST00000557394 DDX3YO15523 660 aaKnown RBP11.21□□□□□ -0.62
SUPT16H-207ENST00000557394 RNASEH2AO75792 299 aaKnown RBP11.21□□□□□ -0.62
SUPT16H-207ENST00000557394 FGRP09769 529 aa11.21□□□□□ -0.62
SUPT16H-207ENST00000557394 PTGIRP43119 386 aa11.21□□□□□ -0.62
SUPT16H-207ENST00000557394 SLCO1A2P46721 670 aa11.21□□□□□ -0.62
SUPT16H-207ENST00000557394 POLGP54098 1239 aaPredicted RBP11.21□□□□□ -0.62
SUPT16H-207ENST00000557394 MAPK7Q13164 816 aa11.21□□□□□ -0.62
SUPT16H-207ENST00000557394 TRIM28Q13263 835 aaKnown RBP11.21□□□□□ -0.62
SUPT16H-207ENST00000557394 KRT72Q14CN4 511 aa11.21□□□□□ -0.62
SUPT16H-207ENST00000557394 LLGL2Q6P1M3 1020 aa11.21□□□□□ -0.62
SUPT16H-207ENST00000557394 FAM196AQ6ZSG2 479 aa11.21□□□□□ -0.62
SUPT16H-207ENST00000557394 SPATA5Q8NB90 893 aa11.21□□□□□ -0.62
SUPT16H-207ENST00000557394 KCNN1Q92952 543 aa11.21□□□□□ -0.62
SUPT16H-207ENST00000557394 SERPINB12Q96P63 405 aa11.21□□□□□ -0.62
SUPT16H-207ENST00000557394 CRAMP1Q96RY5 1269 aa11.21□□□□□ -0.62
SUPT16H-207ENST00000557394 HAPLN3Q96S86 360 aa11.21□□□□□ -0.62
SUPT16H-207ENST00000557394 TSG101Q99816 390 aa11.21□□□□□ -0.62
SUPT16H-207ENST00000557394 ZBTB3Q9H5J0 574 aa11.21□□□□□ -0.62
SUPT16H-207ENST00000557394 DENND2DQ9H6A0 471 aaPredicted RBP11.21□□□□□ -0.62
SUPT16H-207ENST00000557394 TCP11L1Q9NUJ3 509 aa11.21□□□□□ -0.62
SUPT16H-207ENST00000557394 PARP2Q9UGN5 583 aa11.21□□□□□ -0.62
SUPT16H-207ENST00000557394 SNX24Q9Y343 169 aa11.21□□□□□ -0.62
SUPT16H-207ENST00000557394 PITPNM2Q9BZ72 1349 aa11.21□□□□□ -0.62
SUPT16H-207ENST00000557394 CCDC88AQ3V6T2 1871 aa11.21□□□□□ -0.62
SUPT16H-207ENST00000557394 ATP9AO75110 1047 aa11.2□□□□□ -0.62
SUPT16H-207ENST00000557394 PDE8BO95263 885 aa11.2□□□□□ -0.62
SUPT16H-207ENST00000557394 T-ENOLP0DO92 83 aa11.2□□□□□ -0.62
SUPT16H-207ENST00000557394 KCNA3P22001 575 aa11.2□□□□□ -0.62
SUPT16H-207ENST00000557394 PRKCIP41743 596 aa11.2□□□□□ -0.62
SUPT16H-207ENST00000557394 ARID5AQ03989 594 aa11.2□□□□□ -0.62
SUPT16H-207ENST00000557394 SFSWAPQ12872 951 aaKnown RBP11.2□□□□□ -0.62
SUPT16H-207ENST00000557394 RCN2Q14257 317 aa11.2□□□□□ -0.62
SUPT16H-207ENST00000557394 GSTA3Q16772 222 aa11.2□□□□□ -0.62
SUPT16H-207ENST00000557394 DCAF12L1Q5VU92 463 aa11.2□□□□□ -0.62
SUPT16H-207ENST00000557394 DPY19L2P1Q6NXN4 242 aa11.2□□□□□ -0.62
SUPT16H-207ENST00000557394 ALKBH5Q6P6C2 394 aaKnown RBP11.2□□□□□ -0.62
SUPT16H-207ENST00000557394 POTEAQ6S8J7 498 aa11.2□□□□□ -0.62
SUPT16H-207ENST00000557394 CCBE1Q6UXH8 406 aaPredicted RBP11.2□□□□□ -0.62
SUPT16H-207ENST00000557394 LDHAL6AQ6ZMR3 332 aa11.2□□□□□ -0.62
SUPT16H-207ENST00000557394 NEK10Q6ZWH5 1172 aa11.2□□□□□ -0.62
SUPT16H-207ENST00000557394 INTS8Q75QN2 995 aaKnown RBP11.2□□□□□ -0.62
SUPT16H-207ENST00000557394 NOP9Q86U38 636 aaKnown RBP11.2□□□□□ -0.62
SUPT16H-207ENST00000557394 TRIM59Q8IWR1 403 aa11.2□□□□□ -0.62
SUPT16H-207ENST00000557394 DAGLBQ8NCG7 672 aa11.2□□□□□ -0.62
SUPT16H-207ENST00000557394 MGARPQ8TDB4 240 aa11.2□□□□□ -0.62
SUPT16H-207ENST00000557394 FRS2Q8WU20 508 aa11.2□□□□□ -0.62
SUPT16H-207ENST00000557394 JDP2Q8WYK2 163 aa11.2□□□□□ -0.62
SUPT16H-207ENST00000557394 ARHGEF2Q92974 986 aaKnown RBP11.2□□□□□ -0.62
SUPT16H-207ENST00000557394 TGS1Q96RS0 853 aaKnown RBP11.2□□□□□ -0.62
SUPT16H-207ENST00000557394 CCDC113Q9H0I3 377 aa11.2□□□□□ -0.62
SUPT16H-207ENST00000557394 MTRF1LQ9UGC7 380 aaKnown RBP11.2□□□□□ -0.62
SUPT16H-207ENST00000557394 RASAL2Q9UJF2 1139 aa11.2□□□□□ -0.62
SUPT16H-207ENST00000557394 PCDHA3Q9Y5H8 950 aa11.2□□□□□ -0.62
SUPT16H-207ENST00000557394 LY75O60449 1722 aa11.2□□□□□ -0.62
SUPT16H-207ENST00000557394 MYMKA6NI61 221 aa11.2□□□□□ -0.62
SUPT16H-207ENST00000557394 FGFR2P21802 821 aa11.2□□□□□ -0.62
SUPT16H-207ENST00000557394 ATP5DP30049 168 aa11.2□□□□□ -0.62
SUPT16H-207ENST00000557394 SCNN1BP51168 640 aa11.2□□□□□ -0.62
SUPT16H-207ENST00000557394 LSAMPQ13449 338 aa11.2□□□□□ -0.62
SUPT16H-207ENST00000557394 GIT2Q14161 759 aa11.2□□□□□ -0.62
SUPT16H-207ENST00000557394 CLUL1Q15846 466 aa11.2□□□□□ -0.62
SUPT16H-207ENST00000557394 CNPY1Q3B7I2 92 aa11.2□□□□□ -0.62
SUPT16H-207ENST00000557394 FAM182BQ5T319 152 aa11.2□□□□□ -0.62
SUPT16H-207ENST00000557394 LRRC8CQ8TDW0 803 aa11.2□□□□□ -0.62
SUPT16H-207ENST00000557394 GLG1Q92896 1179 aa11.2□□□□□ -0.62
SUPT16H-207ENST00000557394 RUNDC3BQ96NL0 473 aa11.2□□□□□ -0.62
SUPT16H-207ENST00000557394 GBP5Q96PP8 586 aa11.2□□□□□ -0.62
SUPT16H-207ENST00000557394 CARD9Q9H257 536 aa11.2□□□□□ -0.62
SUPT16H-207ENST00000557394 PREBQ9HCU5 417 aa11.2□□□□□ -0.62
SUPT16H-207ENST00000557394 ERVK-5Q9HDB9 667 aa11.2□□□□□ -0.62
SUPT16H-207ENST00000557394 CHST12Q9NRB3 414 aa11.2□□□□□ -0.62
SUPT16H-207ENST00000557394 AMFRQ9UKV5 643 aa11.2□□□□□ -0.62
SUPT16H-207ENST00000557394 CHKBQ9Y259 395 aa11.2□□□□□ -0.62
SUPT16H-207ENST00000557394 ZNF510Q9Y2H8 683 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms