RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 EYSQ5T1H1 3165 aa15.17■□□□□ 0.02
VPS33B-206ENST00000557358 MEIS3P2A8K0S8 358 aa15.17■□□□□ 0.02
VPS33B-206ENST00000557358 SFI1A8K8P3 1242 aa15.17■□□□□ 0.02
VPS33B-206ENST00000557358 GALTP07902 379 aa15.17■□□□□ 0.02
VPS33B-206ENST00000557358 PBX3P40426 434 aa15.17■□□□□ 0.02
VPS33B-206ENST00000557358 NDUFV1P49821 464 aa15.17■□□□□ 0.02
VPS33B-206ENST00000557358 GRIK3Q13003 919 aa15.17■□□□□ 0.02
VPS33B-206ENST00000557358 MCM6Q14566 821 aa15.17■□□□□ 0.02
VPS33B-206ENST00000557358 SPECC1Q5M775 1068 aa15.17■□□□□ 0.02
VPS33B-206ENST00000557358 PLPP4Q5VZY2 271 aa15.17■□□□□ 0.02
VPS33B-206ENST00000557358 CDR2LQ86X02 465 aaPredicted RBP15.17■□□□□ 0.02
VPS33B-206ENST00000557358 LINC00301Q8NCQ3 95 aa15.17■□□□□ 0.02
VPS33B-206ENST00000557358 IGSF21Q96ID5 467 aa15.17■□□□□ 0.02
VPS33B-206ENST00000557358 NTPCRQ9BSD7 190 aaKnown RBP15.17■□□□□ 0.02
VPS33B-206ENST00000557358 COLEC11Q9BWP8 271 aa15.17■□□□□ 0.02
VPS33B-206ENST00000557358 ARHGAP28Q9P2N2 729 aa15.17■□□□□ 0.02
VPS33B-206ENST00000557358 TFIP11Q9UBB9 837 aaKnown RBP15.17■□□□□ 0.02
VPS33B-206ENST00000557358 TNFSF13BQ9Y275 285 aa15.17■□□□□ 0.02
VPS33B-206ENST00000557358 SSX2IPQ9Y2D8 614 aa15.17■□□□□ 0.02
VPS33B-206ENST00000557358 TDRD15B5MCY1 1934 aaKnown RBP15.17■□□□□ 0.02
VPS33B-206ENST00000557358 PLXNA4Q9HCM2 1894 aa15.16■□□□□ 0.02
VPS33B-206ENST00000557358 MYH15Q9Y2K3 1946 aa15.16■□□□□ 0.02
VPS33B-206ENST00000557358 NT5C1B-RDH14C9J2C7 533 aa15.16■□□□□ 0.02
VPS33B-206ENST00000557358 AKAP5P24588 427 aa15.16■□□□□ 0.02
VPS33B-206ENST00000557358 OR1G1P47890 313 aa15.16■□□□□ 0.02
VPS33B-206ENST00000557358 NRIP1P48552 1158 aa15.16■□□□□ 0.02
VPS33B-206ENST00000557358 SCNN1GP51170 649 aa15.16■□□□□ 0.02
VPS33B-206ENST00000557358 TFF2Q03403 129 aa15.16■□□□□ 0.02
VPS33B-206ENST00000557358 GRIN1Q05586 938 aa15.16■□□□□ 0.02
VPS33B-206ENST00000557358 LEXMQ3ZCV2 418 aa15.16■□□□□ 0.02
VPS33B-206ENST00000557358 ZNF568Q3ZCX4 644 aa15.16■□□□□ 0.02
VPS33B-206ENST00000557358 DDX53Q86TM3 631 aaKnown RBP15.16■□□□□ 0.02
VPS33B-206ENST00000557358 DAW1Q8N136 415 aa15.16■□□□□ 0.02
VPS33B-206ENST00000557358 CLIC6Q96NY7 704 aa15.16■□□□□ 0.02
VPS33B-206ENST00000557358 REEP2Q9BRK0 252 aa15.16■□□□□ 0.02
VPS33B-206ENST00000557358 FAM13BQ9NYF5 915 aa15.16■□□□□ 0.02
VPS33B-206ENST00000557358 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.15■□□□□ 0.02
VPS33B-206ENST00000557358 K7ENM7 598 aa15.15■□□□□ 0.02
VPS33B-206ENST00000557358 INPPL1O15357 1258 aa15.15■□□□□ 0.02
VPS33B-206ENST00000557358 CUTAO60888 179 aa15.15■□□□□ 0.02
VPS33B-206ENST00000557358 THP07101 528 aa15.15■□□□□ 0.02
VPS33B-206ENST00000557358 DNAJB1P25685 340 aa15.15■□□□□ 0.02
VPS33B-206ENST00000557358 ME1P48163 572 aa15.15■□□□□ 0.02
VPS33B-206ENST00000557358 SLC11A1P49279 550 aa15.15■□□□□ 0.02
VPS33B-206ENST00000557358 AMPD3Q01432 767 aa15.15■□□□□ 0.02
VPS33B-206ENST00000557358 HYAL1Q12794 435 aa15.15■□□□□ 0.02
VPS33B-206ENST00000557358 MAPK7Q13164 816 aa15.15■□□□□ 0.02
VPS33B-206ENST00000557358 FOXD4L6Q3SYB3 417 aaPredicted RBP15.15■□□□□ 0.02
VPS33B-206ENST00000557358 FOXD4L3Q6VB84 417 aaPredicted RBP15.15■□□□□ 0.02
VPS33B-206ENST00000557358 RBM23Q86U06 439 aaKnown RBP15.15■□□□□ 0.02
VPS33B-206ENST00000557358 ZNF280BQ86YH2 543 aa15.15■□□□□ 0.02
VPS33B-206ENST00000557358 FAM178BQ8IXR5 827 aa15.15■□□□□ 0.02
VPS33B-206ENST00000557358 VPS52Q8N1B4 723 aa15.15■□□□□ 0.02
VPS33B-206ENST00000557358 EFHBQ8N7U6 833 aa15.15■□□□□ 0.02
VPS33B-206ENST00000557358 ZFP42Q96MM3 310 aa15.15■□□□□ 0.02
VPS33B-206ENST00000557358 ACO2Q99798 780 aaKnown RBP15.15■□□□□ 0.02
VPS33B-206ENST00000557358 PYM1Q9BRP8 204 aaKnown RBP15.15■□□□□ 0.02
VPS33B-206ENST00000557358 RNF39Q9H2S5 420 aa15.15■□□□□ 0.02
VPS33B-206ENST00000557358 BLOC1S4Q9NUP1 217 aa15.15■□□□□ 0.02
VPS33B-206ENST00000557358 SNTG2Q9NY99 539 aa15.15■□□□□ 0.02
VPS33B-206ENST00000557358 KLK14Q9P0G3 267 aa15.15■□□□□ 0.02
VPS33B-206ENST00000557358 GDAQ9Y2T3 454 aa15.15■□□□□ 0.02
VPS33B-206ENST00000557358 NPHP3-ACAD11A0A0J9YXS1 232 aa15.14■□□□□ 0.01
VPS33B-206ENST00000557358 NRP1O14786 923 aa15.14■□□□□ 0.01
VPS33B-206ENST00000557358 FSCN2O14926 492 aa15.14■□□□□ 0.01
VPS33B-206ENST00000557358 TRAK2O60296 914 aa15.14■□□□□ 0.01
VPS33B-206ENST00000557358 TOM1L1O75674 476 aa15.14■□□□□ 0.01
VPS33B-206ENST00000557358 RECQL4O94761 1208 aa15.14■□□□□ 0.01
VPS33B-206ENST00000557358 CXCL14O95715 111 aa15.14■□□□□ 0.01
VPS33B-206ENST00000557358 MCF2P10911 925 aa15.14■□□□□ 0.01
VPS33B-206ENST00000557358 GAP43P17677 238 aa15.14■□□□□ 0.01
VPS33B-206ENST00000557358 IRS1P35568 1242 aa15.14■□□□□ 0.01
VPS33B-206ENST00000557358 LIG4P49917 911 aa15.14■□□□□ 0.01
VPS33B-206ENST00000557358 ERVFC1P60507 584 aa15.14■□□□□ 0.01
VPS33B-206ENST00000557358 CACNB1Q02641 598 aaPredicted RBP15.14■□□□□ 0.01
VPS33B-206ENST00000557358 CAMK1Q14012 370 aa15.14■□□□□ 0.01
VPS33B-206ENST00000557358 KYAT1Q16773 422 aa15.14■□□□□ 0.01
VPS33B-206ENST00000557358 NT5DC1Q5TFE4 455 aa15.14■□□□□ 0.01
VPS33B-206ENST00000557358 KIAA1841Q6NSI8 718 aa15.14■□□□□ 0.01
VPS33B-206ENST00000557358 ELMSAN1Q6PJG2 1045 aa15.14■□□□□ 0.01
VPS33B-206ENST00000557358 MPZL3Q6UWV2 235 aa15.14■□□□□ 0.01
VPS33B-206ENST00000557358 ZPBP2Q6X784 338 aa15.14■□□□□ 0.01
VPS33B-206ENST00000557358 HAUS6Q7Z4H7 955 aa15.14■□□□□ 0.01
VPS33B-206ENST00000557358 TMEM161BQ8NDZ6 487 aa15.14■□□□□ 0.01
VPS33B-206ENST00000557358 ADAMTS19Q8TE59 1207 aa15.14■□□□□ 0.01
VPS33B-206ENST00000557358 TARS2Q9BW92 718 aaKnown RBP15.14■□□□□ 0.01
VPS33B-206ENST00000557358 EMILIN2Q9BXX0 1053 aa15.14■□□□□ 0.01
VPS33B-206ENST00000557358 CUEDC2Q9H467 287 aa15.14■□□□□ 0.01
VPS33B-206ENST00000557358 ANKFY1Q9P2R3 1169 aa15.14■□□□□ 0.01
VPS33B-206ENST00000557358 SEL1LQ9UBV2 794 aa15.14■□□□□ 0.01
VPS33B-206ENST00000557358 DNAJB4Q9UDY4 337 aa15.14■□□□□ 0.01
VPS33B-206ENST00000557358 PRG3Q9Y2Y8 225 aaPredicted RBP15.14■□□□□ 0.01
VPS33B-206ENST00000557358 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.13■□□□□ 0.01
VPS33B-206ENST00000557358 H3BQ06 376 aaPredicted RBP15.13■□□□□ 0.01
VPS33B-206ENST00000557358 CLDN3O15551 220 aa15.13■□□□□ 0.01
VPS33B-206ENST00000557358 DDHD2O94830 711 aa15.13■□□□□ 0.01
VPS33B-206ENST00000557358 URODP06132 367 aa15.13■□□□□ 0.01
VPS33B-206ENST00000557358 CTSAP10619 480 aa15.13■□□□□ 0.01
VPS33B-206ENST00000557358 MAPTP10636 758 aaKnown RBP15.13■□□□□ 0.01
VPS33B-206ENST00000557358 HARSP12081 509 aaKnown RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms