RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 POLR2AP24928 1970 aaKnown RBP9.05□□□□□ -0.96
ATXN3-235ENST00000556082 LRRC53A6NM62 1247 aa9.05□□□□□ -0.96
ATXN3-235ENST00000556082 FANCGO15287 622 aa9.05□□□□□ -0.96
ATXN3-235ENST00000556082 P4HA2O15460 535 aa9.05□□□□□ -0.96
ATXN3-235ENST00000556082 USO1O60763 962 aaKnown RBP9.05□□□□□ -0.96
ATXN3-235ENST00000556082 SERPING1P05155 500 aa9.05□□□□□ -0.96
ATXN3-235ENST00000556082 ERCC3P19447 782 aa9.05□□□□□ -0.96
ATXN3-235ENST00000556082 PON1P27169 355 aa9.05□□□□□ -0.96
ATXN3-235ENST00000556082 CASP4P49662 377 aa9.05□□□□□ -0.96
ATXN3-235ENST00000556082 SP2Q02086 613 aa9.05□□□□□ -0.96
ATXN3-235ENST00000556082 SPA17Q15506 151 aa9.05□□□□□ -0.96
ATXN3-235ENST00000556082 GPR162Q16538 588 aa9.05□□□□□ -0.96
ATXN3-235ENST00000556082 EXOC3L4Q17RC7 722 aa9.05□□□□□ -0.96
ATXN3-235ENST00000556082 SLC9C1Q4G0N8 1177 aa9.05□□□□□ -0.96
ATXN3-235ENST00000556082 KLHDC7AQ5VTJ3 777 aa9.05□□□□□ -0.96
ATXN3-235ENST00000556082 SFMBT2Q5VUG0 894 aa9.05□□□□□ -0.96
ATXN3-235ENST00000556082 HGSNATQ68CP4 663 aa9.05□□□□□ -0.96
ATXN3-235ENST00000556082 INTS8Q75QN2 995 aaKnown RBP9.05□□□□□ -0.96
ATXN3-235ENST00000556082 MTERF4Q7Z6M4 381 aaKnown RBP9.05□□□□□ -0.96
ATXN3-235ENST00000556082 NCAPG2Q86XI2 1143 aa9.05□□□□□ -0.96
ATXN3-235ENST00000556082 FMNL3Q8IVF7 1028 aa9.05□□□□□ -0.96
ATXN3-235ENST00000556082 SYCP3Q8IZU3 236 aa9.05□□□□□ -0.96
ATXN3-235ENST00000556082 ACRBPQ8NEB7 543 aa9.05□□□□□ -0.96
ATXN3-235ENST00000556082 ANKRD7Q92527 254 aa9.05□□□□□ -0.96
ATXN3-235ENST00000556082 GTPBP3Q969Y2 492 aaKnown RBP9.05□□□□□ -0.96
ATXN3-235ENST00000556082 LSM14BQ9BX40 385 aaKnown RBP9.05□□□□□ -0.96
ATXN3-235ENST00000556082 TSGA10Q9BZW7 698 aa9.05□□□□□ -0.96
ATXN3-235ENST00000556082 POLD4Q9HCU8 107 aa9.05□□□□□ -0.96
ATXN3-235ENST00000556082 CYP26B1Q9NR63 512 aa9.05□□□□□ -0.96
ATXN3-235ENST00000556082 ARHGAP20Q9P2F6 1191 aa9.05□□□□□ -0.96
ATXN3-235ENST00000556082 PHF24Q9UPV7 400 aa9.05□□□□□ -0.96
ATXN3-235ENST00000556082 WDR90Q96KV7 1748 aa9.05□□□□□ -0.96
ATXN3-235ENST00000556082 SYNGAP1Q96PV0 1343 aa9.05□□□□□ -0.96
ATXN3-235ENST00000556082 SCN4AP35499 1836 aa9.04□□□□□ -0.96
ATXN3-235ENST00000556082 K7ENM7 598 aa9.04□□□□□ -0.96
ATXN3-235ENST00000556082 CLIC2O15247 247 aa9.04□□□□□ -0.96
ATXN3-235ENST00000556082 PJA2O43164 708 aa9.04□□□□□ -0.96
ATXN3-235ENST00000556082 KRT86O43790 486 aa9.04□□□□□ -0.96
ATXN3-235ENST00000556082 IL2RAP01589 272 aa9.04□□□□□ -0.96
ATXN3-235ENST00000556082 UCHL3P15374 230 aa9.04□□□□□ -0.96
ATXN3-235ENST00000556082 EIF4A3P38919 411 aaKnown RBP9.04□□□□□ -0.96
ATXN3-235ENST00000556082 PRKCIP41743 596 aa9.04□□□□□ -0.96
ATXN3-235ENST00000556082 NPTX2P47972 431 aa9.04□□□□□ -0.96
ATXN3-235ENST00000556082 VAV2P52735 878 aa9.04□□□□□ -0.96
ATXN3-235ENST00000556082 NPEPPSP55786 919 aa9.04□□□□□ -0.96
ATXN3-235ENST00000556082 DMP1Q13316 513 aaPredicted RBP9.04□□□□□ -0.96
ATXN3-235ENST00000556082 HSP90AA2PQ14568 343 aaPredicted RBP9.04□□□□□ -0.96
ATXN3-235ENST00000556082 KCTD2Q14681 263 aa9.04□□□□□ -0.96
ATXN3-235ENST00000556082 C10orf76Q5T2E6 689 aa9.04□□□□□ -0.96
ATXN3-235ENST00000556082 UTP14CQ5TAP6 766 aaKnown RBP9.04□□□□□ -0.96
ATXN3-235ENST00000556082 MOB2Q70IA6 237 aa9.04□□□□□ -0.96
ATXN3-235ENST00000556082 MAP4K3Q8IVH8 894 aa9.04□□□□□ -0.96
ATXN3-235ENST00000556082 CCDC60Q8IWA6 550 aaPredicted RBP9.04□□□□□ -0.96
ATXN3-235ENST00000556082 TMEM161BQ8NDZ6 487 aa9.04□□□□□ -0.96
ATXN3-235ENST00000556082 AFAP1L1Q8TED9 768 aa9.04□□□□□ -0.96
ATXN3-235ENST00000556082 VTI1AQ96AJ9 217 aa9.04□□□□□ -0.96
ATXN3-235ENST00000556082 CEP170P1Q96L14 293 aa9.04□□□□□ -0.96
ATXN3-235ENST00000556082 MAP7D2Q96T17 732 aa9.04□□□□□ -0.96
ATXN3-235ENST00000556082 TXNRD2Q9NNW7 524 aa9.04□□□□□ -0.96
ATXN3-235ENST00000556082 LZTFL1Q9NQ48 299 aa9.04□□□□□ -0.96
ATXN3-235ENST00000556082 ZNF215Q9UL58 517 aaPredicted RBP9.04□□□□□ -0.96
ATXN3-235ENST00000556082 TBX20Q9UMR3 447 aa9.04□□□□□ -0.96
ATXN3-235ENST00000556082 COL11A1P12107 1806 aaPredicted RBP9.03□□□□□ -0.96
ATXN3-235ENST00000556082 GSTTP1A0A1W2PQM5 241 aa9.03□□□□□ -0.96
ATXN3-235ENST00000556082 CTAGE9A4FU28 777 aa9.03□□□□□ -0.96
ATXN3-235ENST00000556082 TLR2O60603 784 aa9.03□□□□□ -0.96
ATXN3-235ENST00000556082 EXOC3O60645 756 aa9.03□□□□□ -0.96
ATXN3-235ENST00000556082 N4BP1O75113 896 aaKnown RBP9.03□□□□□ -0.96
ATXN3-235ENST00000556082 URI1O94763 535 aaPredicted RBP9.03□□□□□ -0.96
ATXN3-235ENST00000556082 GFPT2O94808 682 aa9.03□□□□□ -0.96
ATXN3-235ENST00000556082 FARP2O94887 1054 aaPredicted RBP9.03□□□□□ -0.96
ATXN3-235ENST00000556082 CETPP11597 493 aa9.03□□□□□ -0.96
ATXN3-235ENST00000556082 MX2P20592 715 aa9.03□□□□□ -0.96
ATXN3-235ENST00000556082 ATP4AP20648 1035 aa9.03□□□□□ -0.96
ATXN3-235ENST00000556082 UBA1P22314 1058 aaKnown RBP9.03□□□□□ -0.96
ATXN3-235ENST00000556082 RFX1P22670 979 aa9.03□□□□□ -0.96
ATXN3-235ENST00000556082 IRS1P35568 1242 aa9.03□□□□□ -0.96
ATXN3-235ENST00000556082 FMO5P49326 533 aa9.03□□□□□ -0.96
ATXN3-235ENST00000556082 GTF2A2P52657 109 aa9.03□□□□□ -0.96
ATXN3-235ENST00000556082 KIF11P52732 1056 aa9.03□□□□□ -0.96
ATXN3-235ENST00000556082 PEX3P56589 373 aa9.03□□□□□ -0.96
ATXN3-235ENST00000556082 JAM2P57087 298 aa9.03□□□□□ -0.96
ATXN3-235ENST00000556082 POLR2FP61218 127 aaKnown RBP9.03□□□□□ -0.96
ATXN3-235ENST00000556082 PRKCEQ02156 737 aa9.03□□□□□ -0.96
ATXN3-235ENST00000556082 KIF5AQ12840 1032 aa9.03□□□□□ -0.96
ATXN3-235ENST00000556082 FSTL1Q12841 308 aa9.03□□□□□ -0.96
ATXN3-235ENST00000556082 TARBP2Q15633 366 aaKnown RBP9.03□□□□□ -0.96
ATXN3-235ENST00000556082 BRDTQ58F21 947 aaPredicted RBP9.03□□□□□ -0.96
ATXN3-235ENST00000556082 GNASQ5JWF2 1037 aa9.03□□□□□ -0.96
ATXN3-235ENST00000556082 ZNF569Q5MCW4 686 aa9.03□□□□□ -0.96
ATXN3-235ENST00000556082 FAM102BQ5T8I3 360 aa9.03□□□□□ -0.96
ATXN3-235ENST00000556082 PLA2G4FQ68DD2 849 aa9.03□□□□□ -0.96
ATXN3-235ENST00000556082 METTL7BQ6UX53 244 aa9.03□□□□□ -0.96
ATXN3-235ENST00000556082 SEPT14Q6ZU15 432 aa9.03□□□□□ -0.96
ATXN3-235ENST00000556082 CYFIP1Q7L576 1253 aa9.03□□□□□ -0.96
ATXN3-235ENST00000556082 IRF2BP2Q7Z5L9 587 aa9.03□□□□□ -0.96
ATXN3-235ENST00000556082 KIAA1328Q86T90 577 aa9.03□□□□□ -0.96
ATXN3-235ENST00000556082 EXOC8Q8IYI6 725 aa9.03□□□□□ -0.96
ATXN3-235ENST00000556082 ABRAQ8N0Z2 381 aa9.03□□□□□ -0.96
ATXN3-235ENST00000556082 RNF10Q8N5U6 811 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms