RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 SLC1A4P43007 532 aa7.26□□□□□ -1.25
SCFD1-212ENST00000554486 GNAQP50148 359 aa7.26□□□□□ -1.25
SCFD1-212ENST00000554486 ZNF143P52747 638 aaPredicted RBP7.26□□□□□ -1.25
SCFD1-212ENST00000554486 USP14P54578 494 aa7.26□□□□□ -1.25
SCFD1-212ENST00000554486 ZP2Q05996 745 aa7.26□□□□□ -1.25
SCFD1-212ENST00000554486 BECN1Q14457 450 aa7.26□□□□□ -1.25
SCFD1-212ENST00000554486 BMS1Q14692 1282 aaKnown RBP7.26□□□□□ -1.25
SCFD1-212ENST00000554486 PPP2R5BQ15173 497 aa7.26□□□□□ -1.25
SCFD1-212ENST00000554486 CCDC96Q2M329 555 aa7.26□□□□□ -1.25
SCFD1-212ENST00000554486 FAM83BQ5T0W9 1011 aa7.26□□□□□ -1.25
SCFD1-212ENST00000554486 GPATCH4Q5T3I0 446 aaKnown RBP7.26□□□□□ -1.25
SCFD1-212ENST00000554486 RGMBQ6NW40 437 aa7.26□□□□□ -1.25
SCFD1-212ENST00000554486 KCTD1Q719H9 257 aa7.26□□□□□ -1.25
SCFD1-212ENST00000554486 SPATC1Q76KD6 591 aa7.26□□□□□ -1.25
SCFD1-212ENST00000554486 THAP5Q7Z6K1 395 aa7.26□□□□□ -1.25
SCFD1-212ENST00000554486 PRRT2Q7Z6L0 340 aaPredicted RBP7.26□□□□□ -1.25
SCFD1-212ENST00000554486 ATG4DQ86TL0 474 aaPredicted RBP7.26□□□□□ -1.25
SCFD1-212ENST00000554486 DAGLBQ8NCG7 672 aa7.26□□□□□ -1.25
SCFD1-212ENST00000554486 NSUN7Q8NE18 718 aaKnown RBP7.26□□□□□ -1.25
SCFD1-212ENST00000554486 CTCFLQ8NI51 663 aaPredicted RBP7.26□□□□□ -1.25
SCFD1-212ENST00000554486 ENOX1Q8TC92 643 aaKnown RBP7.26□□□□□ -1.25
SCFD1-212ENST00000554486 LPAR1Q92633 364 aa7.26□□□□□ -1.25
SCFD1-212ENST00000554486 DEPDC7Q96QD5 511 aa7.26□□□□□ -1.25
SCFD1-212ENST00000554486 UBA5Q9GZZ9 404 aa7.26□□□□□ -1.25
SCFD1-212ENST00000554486 CPVLQ9H3G5 476 aa7.26□□□□□ -1.25
SCFD1-212ENST00000554486 ZSWIM4Q9H7M6 989 aa7.26□□□□□ -1.25
SCFD1-212ENST00000554486 CHST7Q9NS84 486 aa7.26□□□□□ -1.25
SCFD1-212ENST00000554486 RBM28Q9NW13 759 aaKnown RBP7.26□□□□□ -1.25
SCFD1-212ENST00000554486 WHRNQ9P202 907 aa7.26□□□□□ -1.25
SCFD1-212ENST00000554486 FHOD1Q9Y613 1164 aa7.26□□□□□ -1.25
SCFD1-212ENST00000554486 CCDC196A0A1B0GTZ2 297 aa7.25□□□□□ -1.25
SCFD1-212ENST00000554486 TMEM232C9JQI7 657 aa7.25□□□□□ -1.25
SCFD1-212ENST00000554486 PLA2G6O60733 806 aa7.25□□□□□ -1.25
SCFD1-212ENST00000554486 RNASE1P07998 156 aaKnown RBP7.25□□□□□ -1.25
SCFD1-212ENST00000554486 TPP2P29144 1249 aaPredicted RBP7.25□□□□□ -1.25
SCFD1-212ENST00000554486 SLC16A2P36021 539 aa7.25□□□□□ -1.25
SCFD1-212ENST00000554486 SNAPC2Q13487 334 aa7.25□□□□□ -1.25
SCFD1-212ENST00000554486 TREML2Q5T2D2 321 aa7.25□□□□□ -1.25
SCFD1-212ENST00000554486 BTNL9Q6UXG8 535 aa7.25□□□□□ -1.25
SCFD1-212ENST00000554486 GADL1Q6ZQY3 521 aa7.25□□□□□ -1.25
SCFD1-212ENST00000554486 EEPD1Q7L9B9 569 aa7.25□□□□□ -1.25
SCFD1-212ENST00000554486 ARHGEF39Q8N4T4 335 aa7.25□□□□□ -1.25
SCFD1-212ENST00000554486 ADCY4Q8NFM4 1077 aa7.25□□□□□ -1.25
SCFD1-212ENST00000554486 SMARCC2Q8TAQ2 1214 aa7.25□□□□□ -1.25
SCFD1-212ENST00000554486 PHKBQ93100 1093 aa7.25□□□□□ -1.25
SCFD1-212ENST00000554486 TCTN2Q96GX1 697 aa7.25□□□□□ -1.25
SCFD1-212ENST00000554486 INTS4Q96HW7 963 aaKnown RBP7.25□□□□□ -1.25
SCFD1-212ENST00000554486 HHIPL1Q96JK4 782 aa7.25□□□□□ -1.25
SCFD1-212ENST00000554486 LLPHQ9BRT6 129 aaKnown RBP7.25□□□□□ -1.25
SCFD1-212ENST00000554486 SPZ1Q9BXG8 430 aa7.25□□□□□ -1.25
SCFD1-212ENST00000554486 RPAP3Q9H6T3 665 aaPredicted RBP7.25□□□□□ -1.25
SCFD1-212ENST00000554486 RIOX1Q9H6W3 641 aa7.25□□□□□ -1.25
SCFD1-212ENST00000554486 MBNL3Q9NUK0 354 aaKnown RBP7.25□□□□□ -1.25
SCFD1-212ENST00000554486 FBXO28Q9NVF7 368 aa7.25□□□□□ -1.25
SCFD1-212ENST00000554486 TMOD4Q9NZQ9 345 aa7.25□□□□□ -1.25
SCFD1-212ENST00000554486 ABT1Q9ULW3 272 aaKnown RBP7.25□□□□□ -1.25
SCFD1-212ENST00000554486 hCG_1642624A0A1W2PR95 340 aa7.24□□□□□ -1.25
SCFD1-212ENST00000554486 PTPDC1A2A3K4 754 aa7.24□□□□□ -1.25
SCFD1-212ENST00000554486 CPLX1O14810 134 aa7.24□□□□□ -1.25
SCFD1-212ENST00000554486 TBX1O43435 398 aa7.24□□□□□ -1.25
SCFD1-212ENST00000554486 DHX16O60231 1041 aaKnown RBP7.24□□□□□ -1.25
SCFD1-212ENST00000554486 ZBTB48P10074 688 aaPredicted RBP7.24□□□□□ -1.25
SCFD1-212ENST00000554486 FDPSP14324 419 aaKnown RBP7.24□□□□□ -1.25
SCFD1-212ENST00000554486 SMARCA1P28370 1054 aa7.24□□□□□ -1.25
SCFD1-212ENST00000554486 STAT2P52630 851 aa7.24□□□□□ -1.25
SCFD1-212ENST00000554486 GTF2A2P52657 109 aa7.24□□□□□ -1.25
SCFD1-212ENST00000554486 TCEAL1Q15170 157 aa7.24□□□□□ -1.25
SCFD1-212ENST00000554486 SYDE2Q5VT97 1194 aa7.24□□□□□ -1.25
SCFD1-212ENST00000554486 CATSPERGQ6ZRH7 1159 aa7.24□□□□□ -1.25
SCFD1-212ENST00000554486 FAM160B2Q86V87 743 aa7.24□□□□□ -1.25
SCFD1-212ENST00000554486 ADGRF4Q8IZF3 695 aa7.24□□□□□ -1.25
SCFD1-212ENST00000554486 FIBCD1Q8N539 461 aa7.24□□□□□ -1.25
SCFD1-212ENST00000554486 ZNF655Q8N720 491 aaPredicted RBP7.24□□□□□ -1.25
SCFD1-212ENST00000554486 ST13P5Q8NFI4 369 aaPredicted RBP7.24□□□□□ -1.25
SCFD1-212ENST00000554486 BRI3BPQ8WY22 251 aa7.24□□□□□ -1.25
SCFD1-212ENST00000554486 MTMR8Q96EF0 704 aa7.24□□□□□ -1.25
SCFD1-212ENST00000554486 RCC1LQ96I51 464 aaKnown RBP7.24□□□□□ -1.25
SCFD1-212ENST00000554486 MRGPRX3Q96LB0 322 aa7.24□□□□□ -1.25
SCFD1-212ENST00000554486 IPO9Q96P70 1041 aaKnown RBP7.24□□□□□ -1.25
SCFD1-212ENST00000554486 SRPK1Q96SB4 655 aaKnown RBP7.24□□□□□ -1.25
SCFD1-212ENST00000554486 APBA2Q99767 749 aa7.24□□□□□ -1.25
SCFD1-212ENST00000554486 LZTS2Q9BRK4 669 aa7.24□□□□□ -1.25
SCFD1-212ENST00000554486 MCMBPQ9BTE3 642 aa7.24□□□□□ -1.25
SCFD1-212ENST00000554486 SLC26A6Q9BXS9 759 aa7.24□□□□□ -1.25
SCFD1-212ENST00000554486 NOL6Q9H6R4 1146 aaKnown RBP7.24□□□□□ -1.25
SCFD1-212ENST00000554486 JMJD4Q9H9V9 463 aa7.24□□□□□ -1.25
SCFD1-212ENST00000554486 GPATCH2Q9NW75 528 aa7.24□□□□□ -1.25
SCFD1-212ENST00000554486 ORC3Q9UBD5 711 aaPredicted RBP7.24□□□□□ -1.25
SCFD1-212ENST00000554486 ZMYM5Q9UJ78 669 aa7.24□□□□□ -1.25
SCFD1-212ENST00000554486 FEM1BQ9UK73 627 aa7.24□□□□□ -1.25
SCFD1-212ENST00000554486 ISY1Q9ULR0 285 aaKnown RBP7.24□□□□□ -1.25
SCFD1-212ENST00000554486 AGTPBP1Q9UPW5 1226 aa7.24□□□□□ -1.25
SCFD1-212ENST00000554486 ZNF281Q9Y2X9 895 aa7.24□□□□□ -1.25
SCFD1-212ENST00000554486 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.24□□□□□ -1.25
SCFD1-212ENST00000554486 COL11A1P12107 1806 aaPredicted RBP7.24□□□□□ -1.25
SCFD1-212ENST00000554486 CCL15-CCL14A0A0B4J2E2 113 aa7.23□□□□□ -1.25
SCFD1-212ENST00000554486 RASSF10A6NK89 507 aa7.23□□□□□ -1.25
SCFD1-212ENST00000554486 BTBD19C9JJ37 291 aa7.23□□□□□ -1.25
SCFD1-212ENST00000554486 H0Y8X5 98 aa7.23□□□□□ -1.25
SCFD1-212ENST00000554486 MEIS1O00470 390 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms