RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 AFF1P51825 1210 aaKnown RBP14.37□□□□□ -0.11
SHMT2-211ENST00000554310 SMTNP53814 917 aa14.37□□□□□ -0.11
SHMT2-211ENST00000554310 DSC1Q08554 894 aa14.37□□□□□ -0.11
SHMT2-211ENST00000554310 GRIK3Q13003 919 aa14.37□□□□□ -0.11
SHMT2-211ENST00000554310 SMC1AQ14683 1233 aaKnown RBP14.37□□□□□ -0.11
SHMT2-211ENST00000554310 BMS1Q14692 1282 aaKnown RBP14.37□□□□□ -0.11
SHMT2-211ENST00000554310 KARSQ15046 597 aaKnown RBP14.37□□□□□ -0.11
SHMT2-211ENST00000554310 ATF7IP2Q5U623 682 aa14.37□□□□□ -0.11
SHMT2-211ENST00000554310 PLPP4Q5VZY2 271 aa14.37□□□□□ -0.11
SHMT2-211ENST00000554310 DDX53Q86TM3 631 aaKnown RBP14.37□□□□□ -0.11
SHMT2-211ENST00000554310 GPBP1Q86WP2 473 aa14.37□□□□□ -0.11
SHMT2-211ENST00000554310 TMEM173Q86WV6 379 aaPredicted RBP14.37□□□□□ -0.11
SHMT2-211ENST00000554310 RAD54LQ92698 747 aa14.37□□□□□ -0.11
SHMT2-211ENST00000554310 ZFP42Q96MM3 310 aa14.37□□□□□ -0.11
SHMT2-211ENST00000554310 GBP4Q96PP9 640 aa14.37□□□□□ -0.11
SHMT2-211ENST00000554310 MRPL4Q9BYD3 311 aaKnown RBP14.37□□□□□ -0.11
SHMT2-211ENST00000554310 IGFLR1Q9H665 355 aa14.37□□□□□ -0.11
SHMT2-211ENST00000554310 TLE6Q9H808 572 aa14.37□□□□□ -0.11
SHMT2-211ENST00000554310 BLOC1S4Q9NUP1 217 aa14.37□□□□□ -0.11
SHMT2-211ENST00000554310 FAM50BQ9Y247 325 aa14.37□□□□□ -0.11
SHMT2-211ENST00000554310 TNFSF13BQ9Y275 285 aa14.37□□□□□ -0.11
SHMT2-211ENST00000554310 H0YCG3 227 aa14.36□□□□□ -0.11
SHMT2-211ENST00000554310 DDHD2O94830 711 aa14.36□□□□□ -0.11
SHMT2-211ENST00000554310 SRGAP2BP0DMP2 458 aa14.36□□□□□ -0.11
SHMT2-211ENST00000554310 AKAP5P24588 427 aa14.36□□□□□ -0.11
SHMT2-211ENST00000554310 DEKP35659 375 aaKnown RBP14.36□□□□□ -0.11
SHMT2-211ENST00000554310 LTBRP36941 435 aa14.36□□□□□ -0.11
SHMT2-211ENST00000554310 NDUFV1P49821 464 aa14.36□□□□□ -0.11
SHMT2-211ENST00000554310 CEBPZQ03701 1054 aaKnown RBP14.36□□□□□ -0.11
SHMT2-211ENST00000554310 RAD51AP2Q09MP3 1159 aa14.36□□□□□ -0.11
SHMT2-211ENST00000554310 ADAM15Q13444 863 aa14.36□□□□□ -0.11
SHMT2-211ENST00000554310 SLC39A14Q15043 492 aa14.36□□□□□ -0.11
SHMT2-211ENST00000554310 DUSP6Q16828 381 aa14.36□□□□□ -0.11
SHMT2-211ENST00000554310 EEF1DP3Q658K8 133 aa14.36□□□□□ -0.11
SHMT2-211ENST00000554310 PTCRAQ6ISU1 281 aaPredicted RBP14.36□□□□□ -0.11
SHMT2-211ENST00000554310 TMC7Q7Z402 723 aa14.36□□□□□ -0.11
SHMT2-211ENST00000554310 RBM23Q86U06 439 aaKnown RBP14.36□□□□□ -0.11
SHMT2-211ENST00000554310 COLGALT2Q8IYK4 626 aa14.36□□□□□ -0.11
SHMT2-211ENST00000554310 KRI1Q8N9T8 703 aaKnown RBP14.36□□□□□ -0.11
SHMT2-211ENST00000554310 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.36□□□□□ -0.11
SHMT2-211ENST00000554310 LRRC15Q8TF66 581 aa14.36□□□□□ -0.11
SHMT2-211ENST00000554310 BCL7CQ8WUZ0 217 aaPredicted RBP14.36□□□□□ -0.11
SHMT2-211ENST00000554310 LARP4BQ92615 738 aaKnown RBP14.36□□□□□ -0.11
SHMT2-211ENST00000554310 ZNF396Q96N95 335 aaPredicted RBP14.36□□□□□ -0.11
SHMT2-211ENST00000554310 RPS6KC1Q96S38 1066 aa14.36□□□□□ -0.11
SHMT2-211ENST00000554310 NTPCRQ9BSD7 190 aaKnown RBP14.36□□□□□ -0.11
SHMT2-211ENST00000554310 ZBP1Q9H171 429 aa14.36□□□□□ -0.11
SHMT2-211ENST00000554310 LARSQ9P2J5 1176 aaKnown RBP14.36□□□□□ -0.11
SHMT2-211ENST00000554310 STK17AQ9UEE5 414 aa14.36□□□□□ -0.11
SHMT2-211ENST00000554310 CCDC39Q9UFE4 941 aa14.36□□□□□ -0.11
SHMT2-211ENST00000554310 PARP2Q9UGN5 583 aa14.36□□□□□ -0.11
SHMT2-211ENST00000554310 SLC16A4O15374 487 aa14.35□□□□□ -0.11
SHMT2-211ENST00000554310 LINC01565O15544 149 aa14.35□□□□□ -0.11
SHMT2-211ENST00000554310 NR1I2O75469 434 aa14.35□□□□□ -0.11
SHMT2-211ENST00000554310 RECQL4O94761 1208 aa14.35□□□□□ -0.11
SHMT2-211ENST00000554310 ALDH2P05091 517 aa14.35□□□□□ -0.11
SHMT2-211ENST00000554310 ZSCAN22P10073 491 aaPredicted RBP14.35□□□□□ -0.11
SHMT2-211ENST00000554310 SCP2P22307 547 aa14.35□□□□□ -0.11
SHMT2-211ENST00000554310 STRN3Q13033 797 aa14.35□□□□□ -0.11
SHMT2-211ENST00000554310 GIT2Q14161 759 aa14.35□□□□□ -0.11
SHMT2-211ENST00000554310 STK38Q15208 465 aa14.35□□□□□ -0.11
SHMT2-211ENST00000554310 ARSHQ5FYA8 562 aa14.35□□□□□ -0.11
SHMT2-211ENST00000554310 NT5DC1Q5TFE4 455 aa14.35□□□□□ -0.11
SHMT2-211ENST00000554310 VPS52Q8N1B4 723 aa14.35□□□□□ -0.11
SHMT2-211ENST00000554310 GSTCDQ8NEC7 633 aa14.35□□□□□ -0.11
SHMT2-211ENST00000554310 KCNN1Q92952 543 aa14.35□□□□□ -0.11
SHMT2-211ENST00000554310 EPSTI1Q96J88 318 aa14.35□□□□□ -0.11
SHMT2-211ENST00000554310 REEP2Q9BRK0 252 aa14.35□□□□□ -0.11
SHMT2-211ENST00000554310 USP20Q9Y2K6 914 aa14.35□□□□□ -0.11
SHMT2-211ENST00000554310 FAN1Q9Y2M0 1017 aa14.35□□□□□ -0.11
SHMT2-211ENST00000554310 IRAK3Q9Y616 596 aa14.35□□□□□ -0.11
SHMT2-211ENST00000554310 GRXCR2A6NFK2 248 aa14.34□□□□□ -0.11
SHMT2-211ENST00000554310 C2orf71A6NGG8 1288 aa14.34□□□□□ -0.11
SHMT2-211ENST00000554310 SFI1A8K8P3 1242 aa14.34□□□□□ -0.11
SHMT2-211ENST00000554310 HIDE1A8MVS5 230 aa14.34□□□□□ -0.11
SHMT2-211ENST00000554310 TNFRSF10AO00220 468 aa14.34□□□□□ -0.11
SHMT2-211ENST00000554310 NRP1O14786 923 aa14.34□□□□□ -0.11
SHMT2-211ENST00000554310 TBCAO75347 108 aaKnown RBP14.34□□□□□ -0.11
SHMT2-211ENST00000554310 GLP2RO95838 553 aa14.34□□□□□ -0.11
SHMT2-211ENST00000554310 F13A1P00488 732 aa14.34□□□□□ -0.11
SHMT2-211ENST00000554310 KRT18P05783 430 aaKnown RBP14.34□□□□□ -0.11
SHMT2-211ENST00000554310 CTSAP10619 480 aa14.34□□□□□ -0.11
SHMT2-211ENST00000554310 MAPTP10636 758 aaKnown RBP14.34□□□□□ -0.11
SHMT2-211ENST00000554310 ZNF131P52739 623 aa14.34□□□□□ -0.11
SHMT2-211ENST00000554310 NCKAP1LP55160 1127 aa14.34□□□□□ -0.11
SHMT2-211ENST00000554310 CACNB1Q02641 598 aaPredicted RBP14.34□□□□□ -0.11
SHMT2-211ENST00000554310 DLX2Q07687 328 aaPredicted RBP14.34□□□□□ -0.11
SHMT2-211ENST00000554310 SMAD4Q13485 552 aaKnown RBP14.34□□□□□ -0.11
SHMT2-211ENST00000554310 MCM6Q14566 821 aa14.34□□□□□ -0.11
SHMT2-211ENST00000554310 GSE1Q14687 1217 aa14.34□□□□□ -0.11
SHMT2-211ENST00000554310 ZNF568Q3ZCX4 644 aa14.34□□□□□ -0.11
SHMT2-211ENST00000554310 USP49Q70CQ1 688 aa14.34□□□□□ -0.11
SHMT2-211ENST00000554310 TAS1R3Q7RTX0 852 aa14.34□□□□□ -0.11
SHMT2-211ENST00000554310 MRPL43Q8N983 215 aaKnown RBP14.34□□□□□ -0.11
SHMT2-211ENST00000554310 TMEM161BQ8NDZ6 487 aa14.34□□□□□ -0.11
SHMT2-211ENST00000554310 ACO2Q99798 780 aaKnown RBP14.34□□□□□ -0.11
SHMT2-211ENST00000554310 VN1R3Q9BXE9 311 aa14.34□□□□□ -0.11
SHMT2-211ENST00000554310 PARVGQ9HBI0 331 aa14.34□□□□□ -0.11
SHMT2-211ENST00000554310 MARCH5Q9NX47 278 aa14.34□□□□□ -0.11
SHMT2-211ENST00000554310 SNTG2Q9NY99 539 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms