RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 SLC10A4Q96EP9 437 aa9.52□□□□□ -0.89
GTF2A1-203ENST00000553612 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.52□□□□□ -0.898e-7■■■■□ 19.4
GTF2A1-203ENST00000553612 TTC7AQ9ULT0 858 aaPredicted RBP9.52□□□□□ -0.89
GTF2A1-203ENST00000553612 GIT1Q9Y2X7 761 aa9.52□□□□□ -0.89
GTF2A1-203ENST00000553612 TTC21AQ8NDW8 1320 aa9.52□□□□□ -0.89
GTF2A1-203ENST00000553612 NOP56O00567 594 aaKnown RBP9.52□□□□□ -0.89
GTF2A1-203ENST00000553612 MAGP20916 626 aa9.52□□□□□ -0.89
GTF2A1-203ENST00000553612 TRPC3Q13507 836 aa9.52□□□□□ -0.89
GTF2A1-203ENST00000553612 SEL1L2Q5TEA6 688 aa9.52□□□□□ -0.89
GTF2A1-203ENST00000553612 PLEKHM3Q6ZWE6 761 aa9.52□□□□□ -0.89
GTF2A1-203ENST00000553612 RHOT2Q8IXI1 618 aa9.52□□□□□ -0.89
GTF2A1-203ENST00000553612 VTA1Q9NP79 307 aa9.52□□□□□ -0.89
GTF2A1-203ENST00000553612 CCDC195A0A1B0GUA6 201 aa9.52□□□□□ -0.89
GTF2A1-203ENST00000553612 FOXN3O00409 490 aaPredicted RBP9.52□□□□□ -0.89
GTF2A1-203ENST00000553612 S100A9P06702 114 aaKnown RBP9.52□□□□□ -0.89
GTF2A1-203ENST00000553612 NUP107P57740 925 aa9.52□□□□□ -0.89
GTF2A1-203ENST00000553612 DSTNP60981 165 aa9.52□□□□□ -0.89
GTF2A1-203ENST00000553612 VEPH1Q14D04 833 aa9.52□□□□□ -0.89
GTF2A1-203ENST00000553612 EDRF1Q3B7T1 1238 aa9.52□□□□□ -0.89
GTF2A1-203ENST00000553612 ARHGEF18Q6ZSZ5 1173 aa9.52□□□□□ -0.89
GTF2A1-203ENST00000553612 HDDC2Q7Z4H3 204 aa9.52□□□□□ -0.89
GTF2A1-203ENST00000553612 TTC25Q96NG3 672 aa9.52□□□□□ -0.89
GTF2A1-203ENST00000553612 NHEJ1Q9H9Q4 299 aaPredicted RBP9.52□□□□□ -0.89
GTF2A1-203ENST00000553612 VPS54Q9P1Q0 977 aa9.52□□□□□ -0.89
GTF2A1-203ENST00000553612 ZBTB43O43298 467 aa9.52□□□□□ -0.89
GTF2A1-203ENST00000553612 ATP9BO43861 1147 aa9.52□□□□□ -0.89
GTF2A1-203ENST00000553612 ICMTO60725 284 aa9.52□□□□□ -0.89
GTF2A1-203ENST00000553612 ITGAXP20702 1163 aa9.52□□□□□ -0.89
GTF2A1-203ENST00000553612 RPL35P42766 123 aaKnown RBP9.52□□□□□ -0.89
GTF2A1-203ENST00000553612 STRN3Q13033 797 aa9.52□□□□□ -0.89
GTF2A1-203ENST00000553612 SGSM1Q2NKQ1 1148 aa9.52□□□□□ -0.89
GTF2A1-203ENST00000553612 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.52□□□□□ -0.89
GTF2A1-203ENST00000553612 DMGDHQ9UI17 866 aaKnown RBP9.52□□□□□ -0.89
GTF2A1-203ENST00000553612 MAN1B1Q9UKM7 699 aa9.52□□□□□ -0.89
GTF2A1-203ENST00000553612 CARNS1A5YM72 827 aa9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 CCDC22O60826 627 aa9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 GEMIN4P57678 1058 aaKnown RBP9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 NCALDP61601 193 aa9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 TRAF2Q12933 501 aa9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 PHC2Q8IXK0 858 aa9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 UBXN6Q9BZV1 441 aa9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 SFMBT1Q9UHJ3 866 aa9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 VPS4AQ9UN37 437 aa9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 A6NHS1 94 aa9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 PEX1O43933 1283 aa9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 CBX6O95503 412 aa9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 FAM153BP0C7A2 387 aa9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 FGFR4P22455 802 aa9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 SERPINH1P50454 418 aaKnown RBP9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 SUZ12Q15022 739 aaKnown RBP9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 FAM153CQ494X1 144 aa9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 MTERF2Q49AM1 385 aa9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 DUS1LQ6P1R4 473 aaKnown RBP9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 LVRNQ6Q4G3 990 aa9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 RFPL4BQ6ZWI9 263 aa9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 AKAP14Q86UN6 197 aa9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 CCDC28AQ8IWP9 274 aa9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 TAMM41Q96BW9 452 aa9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 CDADC1Q9BWV3 514 aa9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 NPHS2Q9NP85 383 aa9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 CNNM1Q9NRU3 951 aa9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 ZNF224Q9NZL3 707 aa9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 TTI1O43156 1089 aa9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 MFAP3LO75121 409 aa9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 FBXO21O94952 628 aa9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 GDI2P50395 445 aaKnown RBP9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 TRIM14Q14142 442 aa9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 SPIDRQ14159 915 aa9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 ASIC2Q16515 512 aa9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 KRT73Q86Y46 540 aa9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 MKL1Q969V6 931 aa9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 CCDC51Q96ER9 411 aa9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 ASIC4Q96FT7 647 aa9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 CHP1Q99653 195 aa9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 JMJD4Q9H9V9 463 aa9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 PPARGC1AQ9UBK2 798 aaKnown RBP9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 USTQ9Y2C2 406 aa9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 SNX24Q9Y343 169 aa9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 CCDC141Q6ZP82 1450 aa9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 CCDC194A0A1B0GVG4 234 aa9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 TNFRSF10AO00220 468 aa9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 EFTUD2Q15029 972 aaKnown RBP eCLIP9.51□□□□□ -0.891e-6■■■□□ 15
GTF2A1-203ENST00000553612 NELFCDQ8IXH7 590 aa9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 MINDY2Q8NBR6 621 aa9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 KRT35Q92764 455 aa9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 DGCR14Q96DF8 476 aaKnown RBP9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 FMO2Q99518 471 aa9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 SAV1Q9H4B6 383 aaPredicted RBP9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 TLR7Q9NYK1 1049 aaKnown RBP9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 SPATA2Q9UM82 520 aa9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 ZWINTO95229 277 aa9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 IL32P24001 234 aa9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 SLC5A3P53794 718 aa9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 LONRF1Q17RB8 773 aa9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 SLC9C2Q5TAH2 1124 aa9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 SPATA1Q5VX52 437 aa9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 RNF207Q6ZRF8 634 aa9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 ZNF285Q96NJ3 590 aa9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 DDX47Q9H0S4 455 aaKnown RBP9.51□□□□□ -0.89
GTF2A1-203ENST00000553612 TIMMDC1Q9NPL8 285 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms