RNA–Protein interactions for RNA: ENST00000550064.5

CACNB3-213, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 746 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-213ENST00000550064 PPP3CAQ08209 521 aa13.19□□□□□ -0.3
CACNB3-213ENST00000550064 ITGA7Q13683 1181 aa13.19□□□□□ -0.3
CACNB3-213ENST00000550064 FIGNQ5HY92 759 aa13.19□□□□□ -0.3
CACNB3-213ENST00000550064 ZBTB41Q5SVQ8 909 aa13.19□□□□□ -0.3
CACNB3-213ENST00000550064 TAF2Q6P1X5 1199 aa13.19□□□□□ -0.3
CACNB3-213ENST00000550064 MPZL3Q6UWV2 235 aa13.19□□□□□ -0.3
CACNB3-213ENST00000550064 ARRDC4Q8NCT1 418 aa13.19□□□□□ -0.3
CACNB3-213ENST00000550064 TMC2Q8TDI7 906 aa13.19□□□□□ -0.3
CACNB3-213ENST00000550064 PARD3BQ8TEW8 1205 aa13.19□□□□□ -0.3
CACNB3-213ENST00000550064 CCDC127Q96BQ5 260 aa13.19□□□□□ -0.3
CACNB3-213ENST00000550064 PRIMPOLQ96LW4 560 aa13.19□□□□□ -0.3
CACNB3-213ENST00000550064 OSMRQ99650 979 aa13.19□□□□□ -0.3
CACNB3-213ENST00000550064 LSM14BQ9BX40 385 aaKnown RBP13.19□□□□□ -0.3
CACNB3-213ENST00000550064 TTYH3Q9C0H2 523 aa13.19□□□□□ -0.3
CACNB3-213ENST00000550064 FAM207AQ9NSI2 230 aaPredicted RBP13.19□□□□□ -0.3
CACNB3-213ENST00000550064 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.19□□□□□ -0.3
CACNB3-213ENST00000550064 CAPN11Q9UMQ6 739 aa13.19□□□□□ -0.3
CACNB3-213ENST00000550064 GINS2Q9Y248 185 aa13.19□□□□□ -0.3
CACNB3-213ENST00000550064 ZKSCAN5Q9Y2L8 839 aa13.19□□□□□ -0.3
CACNB3-213ENST00000550064 LRRIQ3A6PVS8 624 aaPredicted RBP13.18□□□□□ -0.3
CACNB3-213ENST00000550064 TULP1O00294 542 aaPredicted RBP13.18□□□□□ -0.3
CACNB3-213ENST00000550064 EPHB6O15197 1021 aa13.18□□□□□ -0.3
CACNB3-213ENST00000550064 OGTO15294 1046 aa13.18□□□□□ -0.3
CACNB3-213ENST00000550064 FAM189A1O60320 539 aa13.18□□□□□ -0.3
CACNB3-213ENST00000550064 TSPAN1O60635 241 aa13.18□□□□□ -0.3
CACNB3-213ENST00000550064 DARSP14868 501 aaKnown RBP13.18□□□□□ -0.3
CACNB3-213ENST00000550064 TRIM21P19474 475 aaKnown RBP13.18□□□□□ -0.3
CACNB3-213ENST00000550064 SLC9A1P19634 815 aa13.18□□□□□ -0.3
CACNB3-213ENST00000550064 FGFR4P22455 802 aa13.18□□□□□ -0.3
CACNB3-213ENST00000550064 GCLMP48507 274 aa13.18□□□□□ -0.3
CACNB3-213ENST00000550064 CCZ1BP86790 482 aa13.18□□□□□ -0.3
CACNB3-213ENST00000550064 CCZ1P86791 482 aaPredicted RBP13.18□□□□□ -0.3
CACNB3-213ENST00000550064 PTPN11Q06124 597 aaPredicted RBP13.18□□□□□ -0.3
CACNB3-213ENST00000550064 ENPEPQ07075 957 aa13.18□□□□□ -0.3
CACNB3-213ENST00000550064 HSP90AA2PQ14568 343 aaPredicted RBP13.18□□□□□ -0.3
CACNB3-213ENST00000550064 MTFR1Q15390 333 aa13.18□□□□□ -0.3
CACNB3-213ENST00000550064 EXOC3L4Q17RC7 722 aa13.18□□□□□ -0.3
CACNB3-213ENST00000550064 SLC9C1Q4G0N8 1177 aa13.18□□□□□ -0.3
CACNB3-213ENST00000550064 CBWD6Q4V339 395 aa13.18□□□□□ -0.3
CACNB3-213ENST00000550064 SEZ6Q53EL9 994 aa13.18□□□□□ -0.3
CACNB3-213ENST00000550064 CBWD3Q5JTY5 395 aa13.18□□□□□ -0.3
CACNB3-213ENST00000550064 CBWD5Q5RIA9 395 aa13.18□□□□□ -0.3
CACNB3-213ENST00000550064 DPY19L2P1Q6NXN4 242 aa13.18□□□□□ -0.3
CACNB3-213ENST00000550064 GBP6Q6ZN66 633 aa13.18□□□□□ -0.3
CACNB3-213ENST00000550064 SERINC5Q86VE9 423 aa13.18□□□□□ -0.3
CACNB3-213ENST00000550064 CDR2LQ86X02 465 aaPredicted RBP13.18□□□□□ -0.3
CACNB3-213ENST00000550064 CNGA4Q8IV77 575 aa13.18□□□□□ -0.3
CACNB3-213ENST00000550064 ZNF710Q8N1W2 664 aa13.18□□□□□ -0.3
CACNB3-213ENST00000550064 NEK11Q8NG66 645 aa13.18□□□□□ -0.3
CACNB3-213ENST00000550064 IQCDQ96DY2 449 aa13.18□□□□□ -0.3
CACNB3-213ENST00000550064 CCDC51Q96ER9 411 aa13.18□□□□□ -0.3
CACNB3-213ENST00000550064 CPB2Q96IY4 423 aa13.18□□□□□ -0.3
CACNB3-213ENST00000550064 PANX2Q96RD6 677 aa13.18□□□□□ -0.3
CACNB3-213ENST00000550064 POP1Q99575 1024 aaKnown RBP13.18□□□□□ -0.3
CACNB3-213ENST00000550064 PDZD7Q9H5P4 517 aa13.18□□□□□ -0.3
CACNB3-213ENST00000550064 LUC7L2Q9Y383 392 aaKnown RBP13.18□□□□□ -0.3
CACNB3-213ENST00000550064 A0A1W2PQJ5 194 aa13.17□□□□□ -0.3
CACNB3-213ENST00000550064 GTPBP10A4D1E9 387 aaKnown RBP13.17□□□□□ -0.3
CACNB3-213ENST00000550064 STX10O60499 249 aa13.17□□□□□ -0.3
CACNB3-213ENST00000550064 NOL4O94818 638 aa13.17□□□□□ -0.3
CACNB3-213ENST00000550064 ERLIN2O94905 339 aa13.17□□□□□ -0.3
CACNB3-213ENST00000550064 MYCP01106 439 aaPredicted RBP13.17□□□□□ -0.3
CACNB3-213ENST00000550064 HSPA8P11142 646 aaKnown RBP13.17□□□□□ -0.3
CACNB3-213ENST00000550064 SKILP12757 684 aa13.17□□□□□ -0.3
CACNB3-213ENST00000550064 ARF4P18085 180 aaPredicted RBP13.17□□□□□ -0.3
CACNB3-213ENST00000550064 EIF4BP23588 611 aaKnown RBP13.17□□□□□ -0.3
CACNB3-213ENST00000550064 PON1P27169 355 aa13.17□□□□□ -0.3
CACNB3-213ENST00000550064 KRT9P35527 623 aa13.17□□□□□ -0.3
CACNB3-213ENST00000550064 TNFSF9P41273 254 aa13.17□□□□□ -0.3
CACNB3-213ENST00000550064 CRYBB1P53674 252 aaPredicted RBP13.17□□□□□ -0.3
CACNB3-213ENST00000550064 MRPS6P82932 125 aaKnown RBP13.17□□□□□ -0.3
CACNB3-213ENST00000550064 MYL7Q01449 175 aa13.17□□□□□ -0.3
CACNB3-213ENST00000550064 APBA1Q02410 837 aa13.17□□□□□ -0.3
CACNB3-213ENST00000550064 NOLC1Q14978 699 aaKnown RBP eCLIP13.17□□□□□ -0.3
CACNB3-213ENST00000550064 PSMD6Q15008 389 aa13.17□□□□□ -0.3
CACNB3-213ENST00000550064 SNX17Q15036 470 aa13.17□□□□□ -0.3
CACNB3-213ENST00000550064 PTGISQ16647 500 aa13.17□□□□□ -0.3
CACNB3-213ENST00000550064 ZNF568Q3ZCX4 644 aa13.17□□□□□ -0.3
CACNB3-213ENST00000550064 CATSPER4Q7RTX7 472 aa13.17□□□□□ -0.3
CACNB3-213ENST00000550064 ZSCAN30Q86W11 494 aa13.17□□□□□ -0.3
CACNB3-213ENST00000550064 WNT8BQ93098 351 aa13.17□□□□□ -0.3
CACNB3-213ENST00000550064 GLT1D1Q96MS3 346 aa13.17□□□□□ -0.3
CACNB3-213ENST00000550064 CELF4Q9BZC1 486 aaKnown RBP13.17□□□□□ -0.3
CACNB3-213ENST00000550064 TMEM117Q9H0C3 514 aa13.17□□□□□ -0.3
CACNB3-213ENST00000550064 CDT1Q9H211 546 aa13.17□□□□□ -0.3
CACNB3-213ENST00000550064 TMX1Q9H3N1 280 aa13.17□□□□□ -0.3
CACNB3-213ENST00000550064 PAK6Q9NQU5 681 aaPredicted RBP13.17□□□□□ -0.3
CACNB3-213ENST00000550064 TOPORSQ9NS56 1045 aaPredicted RBP13.17□□□□□ -0.3
CACNB3-213ENST00000550064 AGPAT5Q9NUQ2 364 aa13.17□□□□□ -0.3
CACNB3-213ENST00000550064 RBAKQ9NYW8 714 aaPredicted RBP13.17□□□□□ -0.3
CACNB3-213ENST00000550064 PYCARDQ9ULZ3 195 aa13.17□□□□□ -0.3
CACNB3-213ENST00000550064 PHF24Q9UPV7 400 aa13.17□□□□□ -0.3
CACNB3-213ENST00000550064 A0A1B0GUA9 196 aa13.16□□□□□ -0.3
CACNB3-213ENST00000550064 A0A1W2PQ45 241 aaPredicted RBP13.16□□□□□ -0.3
CACNB3-213ENST00000550064 A0A1W2PQY0 241 aa13.16□□□□□ -0.3
CACNB3-213ENST00000550064 P4HA2O15460 535 aa13.16□□□□□ -0.3
CACNB3-213ENST00000550064 N4BP1O75113 896 aaKnown RBP13.16□□□□□ -0.3
CACNB3-213ENST00000550064 DLATP10515 647 aaKnown RBP13.16□□□□□ -0.3
CACNB3-213ENST00000550064 MCF2P10911 925 aa13.16□□□□□ -0.3
CACNB3-213ENST00000550064 ACTN1P12814 892 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms