RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 RUFY3Q7L099 469 aa10.99□□□□□ -0.65
TRAFD1-207ENST00000550051 KRT25Q7Z3Z0 450 aa10.99□□□□□ -0.65
TRAFD1-207ENST00000550051 SKAP1Q86WV1 359 aa10.99□□□□□ -0.65
TRAFD1-207ENST00000550051 RNF149Q8NC42 400 aa10.99□□□□□ -0.65
TRAFD1-207ENST00000550051 RSAD2Q8WXG1 361 aa10.99□□□□□ -0.65
TRAFD1-207ENST00000550051 HAS1Q92839 578 aa10.99□□□□□ -0.65
TRAFD1-207ENST00000550051 ZNF707Q96C28 371 aaPredicted RBP10.99□□□□□ -0.65
TRAFD1-207ENST00000550051 MYADMQ96S97 322 aa10.99□□□□□ -0.65
TRAFD1-207ENST00000550051 NT5C3AQ9H0P0 336 aa10.99□□□□□ -0.65
TRAFD1-207ENST00000550051 ZSWIM6Q9HCJ5 1215 aa10.99□□□□□ -0.65
TRAFD1-207ENST00000550051 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.99□□□□□ -0.65
TRAFD1-207ENST00000550051 ZDHHC7Q9NXF8 308 aa10.99□□□□□ -0.65
TRAFD1-207ENST00000550051 GIT1Q9Y2X7 761 aa10.99□□□□□ -0.65
TRAFD1-207ENST00000550051 IPPQ9Y573 584 aa10.99□□□□□ -0.65
TRAFD1-207ENST00000550051 CLUHO75153 1309 aa10.99□□□□□ -0.65
TRAFD1-207ENST00000550051 FANCMQ8IYD8 2048 aa10.98□□□□□ -0.65
TRAFD1-207ENST00000550051 EPB41L2O43491 1005 aaKnown RBP10.98□□□□□ -0.65
TRAFD1-207ENST00000550051 TSPAN1O60635 241 aa10.98□□□□□ -0.65
TRAFD1-207ENST00000550051 RFPL2O75678 378 aa10.98□□□□□ -0.65
TRAFD1-207ENST00000550051 ERLIN2O94905 339 aa10.98□□□□□ -0.65
TRAFD1-207ENST00000550051 LMNAP02545 664 aaKnown RBP10.98□□□□□ -0.65
TRAFD1-207ENST00000550051 INF2Q27J81 1249 aa10.98□□□□□ -0.65
TRAFD1-207ENST00000550051 NOTUMQ6P988 496 aa10.98□□□□□ -0.65
TRAFD1-207ENST00000550051 CPLX2Q6PUV4 134 aaKnown RBP10.98□□□□□ -0.65
TRAFD1-207ENST00000550051 POTEGQ6S5H5 508 aa10.98□□□□□ -0.65
TRAFD1-207ENST00000550051 GSTCDQ8NEC7 633 aa10.98□□□□□ -0.65
TRAFD1-207ENST00000550051 SMG7Q92540 1137 aaKnown RBP10.98□□□□□ -0.65
TRAFD1-207ENST00000550051 BORCS6Q96GS4 357 aa10.98□□□□□ -0.65
TRAFD1-207ENST00000550051 GAD1Q99259 594 aa10.98□□□□□ -0.65
TRAFD1-207ENST00000550051 EIF2AQ9BY44 585 aaKnown RBP10.98□□□□□ -0.65
TRAFD1-207ENST00000550051 PRKD2Q9BZL6 878 aa10.98□□□□□ -0.65
TRAFD1-207ENST00000550051 CSRNP2Q9H175 543 aa10.98□□□□□ -0.65
TRAFD1-207ENST00000550051 SLKQ9H2G2 1235 aaPredicted RBP10.98□□□□□ -0.65
TRAFD1-207ENST00000550051 ZSWIM4Q9H7M6 989 aa10.98□□□□□ -0.65
TRAFD1-207ENST00000550051 SLC2A4RGQ9NR83 387 aa10.98□□□□□ -0.65
TRAFD1-207ENST00000550051 DLGAP2Q9P1A6 1054 aa10.98□□□□□ -0.65
TRAFD1-207ENST00000550051 PRG3Q9Y2Y8 225 aaPredicted RBP10.98□□□□□ -0.65
TRAFD1-207ENST00000550051 SIT1Q9Y3P8 196 aa10.98□□□□□ -0.65
TRAFD1-207ENST00000550051 ZFP37Q9Y6Q3 630 aaPredicted RBP10.98□□□□□ -0.65
TRAFD1-207ENST00000550051 ZNF292O60281 2723 aa10.97□□□□□ -0.65
TRAFD1-207ENST00000550051 CPLX1O14810 134 aa10.97□□□□□ -0.65
TRAFD1-207ENST00000550051 ZBTB39O15060 712 aa10.97□□□□□ -0.65
TRAFD1-207ENST00000550051 TGM5O43548 720 aa10.97□□□□□ -0.65
TRAFD1-207ENST00000550051 SLITRK3O94933 977 aa10.97□□□□□ -0.65
TRAFD1-207ENST00000550051 REC8O95072 547 aa10.97□□□□□ -0.65
TRAFD1-207ENST00000550051 SPATA31D3P0C874 917 aa10.97□□□□□ -0.65
TRAFD1-207ENST00000550051 EMC2Q15006 297 aa10.97□□□□□ -0.65
TRAFD1-207ENST00000550051 USP41Q3LFD5 358 aa10.97□□□□□ -0.65
TRAFD1-207ENST00000550051 XKR9Q5GH70 373 aa10.97□□□□□ -0.65
TRAFD1-207ENST00000550051 SPATA31D4Q6ZUB0 917 aa10.97□□□□□ -0.65
TRAFD1-207ENST00000550051 NEK8Q86SG6 692 aa10.97□□□□□ -0.65
TRAFD1-207ENST00000550051 PALB2Q86YC2 1186 aa10.97□□□□□ -0.65
TRAFD1-207ENST00000550051 AIFM3Q96NN9 605 aa10.97□□□□□ -0.65
TRAFD1-207ENST00000550051 NAP1L4Q99733 375 aaKnown RBP10.97□□□□□ -0.65
TRAFD1-207ENST00000550051 LXNQ9BS40 222 aa10.97□□□□□ -0.65
TRAFD1-207ENST00000550051 PHF20Q9BVI0 1012 aa10.97□□□□□ -0.65
TRAFD1-207ENST00000550051 NFKBIZQ9BYH8 718 aa10.97□□□□□ -0.65
TRAFD1-207ENST00000550051 GPR62Q9BZJ7 368 aa10.97□□□□□ -0.65
TRAFD1-207ENST00000550051 TM6SF1Q9BZW5 370 aa10.97□□□□□ -0.65
TRAFD1-207ENST00000550051 TBC1D17Q9HA65 648 aa10.97□□□□□ -0.65
TRAFD1-207ENST00000550051 PIDD1Q9HB75 910 aa10.97□□□□□ -0.65
TRAFD1-207ENST00000550051 RGL1Q9NZL6 768 aa10.97□□□□□ -0.65
TRAFD1-207ENST00000550051 HES2Q9Y543 173 aa10.97□□□□□ -0.65
TRAFD1-207ENST00000550051 GVINP1Q7Z2Y8 2422 aa10.97□□□□□ -0.65
TRAFD1-207ENST00000550051 DOCK6Q96HP0 2047 aa10.96□□□□□ -0.65
TRAFD1-207ENST00000550051 ARID2Q68CP9 1835 aa10.96□□□□□ -0.65
TRAFD1-207ENST00000550051 ZMYM2Q9UBW7 1377 aa10.96□□□□□ -0.65
TRAFD1-207ENST00000550051 A0A1B0GUA9 196 aa10.96□□□□□ -0.65
TRAFD1-207ENST00000550051 CCDC194A0A1B0GVG4 234 aa10.96□□□□□ -0.65
TRAFD1-207ENST00000550051 ZMYND10O75800 440 aa10.96□□□□□ -0.65
TRAFD1-207ENST00000550051 LYPLA2O95372 231 aa10.96□□□□□ -0.65
TRAFD1-207ENST00000550051 ARF4P18085 180 aaPredicted RBP10.96□□□□□ -0.65
TRAFD1-207ENST00000550051 ARL2P36404 184 aa10.96□□□□□ -0.65
TRAFD1-207ENST00000550051 MLH1P40692 756 aa10.96□□□□□ -0.65
TRAFD1-207ENST00000550051 STARD6P59095 220 aa10.96□□□□□ -0.65
TRAFD1-207ENST00000550051 CREMQ03060 361 aa10.96□□□□□ -0.65
TRAFD1-207ENST00000550051 SPIRE1Q08AE8 756 aa10.96□□□□□ -0.65
TRAFD1-207ENST00000550051 HTR4Q13639 388 aa10.96□□□□□ -0.65
TRAFD1-207ENST00000550051 TFDP1Q14186 410 aa10.96□□□□□ -0.65
TRAFD1-207ENST00000550051 AMHR2Q16671 573 aa10.96□□□□□ -0.65
TRAFD1-207ENST00000550051 FUT10Q6P4F1 479 aa10.96□□□□□ -0.65
TRAFD1-207ENST00000550051 C1orf210Q8IVY1 113 aa10.96□□□□□ -0.65
TRAFD1-207ENST00000550051 SLFN12Q8IYM2 578 aa10.96□□□□□ -0.65
TRAFD1-207ENST00000550051 HACE1Q8IYU2 909 aa10.96□□□□□ -0.65
TRAFD1-207ENST00000550051 KCNG4Q8TDN1 519 aa10.96□□□□□ -0.65
TRAFD1-207ENST00000550051 GPR152Q8TDT2 470 aa10.96□□□□□ -0.65
TRAFD1-207ENST00000550051 DYDC2Q96IM9 177 aa10.96□□□□□ -0.65
TRAFD1-207ENST00000550051 CPB2Q96IY4 423 aa10.96□□□□□ -0.65
TRAFD1-207ENST00000550051 ZFP42Q96MM3 310 aa10.96□□□□□ -0.65
TRAFD1-207ENST00000550051 MTRQ99707 1265 aa10.96□□□□□ -0.65
TRAFD1-207ENST00000550051 HSD17B14Q9BPX1 270 aa10.96□□□□□ -0.65
TRAFD1-207ENST00000550051 XPNPEP1Q9NQW7 623 aa10.96□□□□□ -0.65
TRAFD1-207ENST00000550051 BMP2KQ9NSY1 1161 aaPredicted RBP10.96□□□□□ -0.65
TRAFD1-207ENST00000550051 ANKEF1Q9NU02 776 aa10.96□□□□□ -0.65
TRAFD1-207ENST00000550051 RYDENQ9NUL5 291 aaKnown RBP10.96□□□□□ -0.65
TRAFD1-207ENST00000550051 ADAM28Q9UKQ2 775 aa10.96□□□□□ -0.65
TRAFD1-207ENST00000550051 CA14Q9ULX7 337 aa10.96□□□□□ -0.65
TRAFD1-207ENST00000550051 KCNJ14Q9UNX9 436 aa10.96□□□□□ -0.65
TRAFD1-207ENST00000550051 CYP46A1Q9Y6A2 500 aa10.96□□□□□ -0.65
TRAFD1-207ENST00000550051 CACNA1IQ9P0X4 2223 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms