RNA–Protein interactions for RNA: ENST00000548570.1

APP-217, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 361 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-217ENST00000548570 MAPK8IP1Q9UQF2 711 aa5.51□□□□□ -1.53
APP-217ENST00000548570 GINS2Q9Y248 185 aa5.51□□□□□ -1.53
APP-217ENST00000548570 FRMPD3Q5JV73 1810 aa5.51□□□□□ -1.53
APP-217ENST00000548570 MROH7Q68CQ1 1323 aa5.5□□□□□ -1.53
APP-217ENST00000548570 MYH15Q9Y2K3 1946 aa5.5□□□□□ -1.53
APP-217ENST00000548570 DOCK5Q9H7D0 1870 aa5.5□□□□□ -1.53
APP-217ENST00000548570 A0A1B0GUA9 196 aa5.5□□□□□ -1.53
APP-217ENST00000548570 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.5□□□□□ -1.53
APP-217ENST00000548570 SYCE3A1L190 88 aa5.5□□□□□ -1.53
APP-217ENST00000548570 LRRIQ4A6NIV6 560 aa5.5□□□□□ -1.53
APP-217ENST00000548570 CCDC169A6NNP5 214 aa5.5□□□□□ -1.53
APP-217ENST00000548570 MEIS3P2A8K0S8 358 aa5.5□□□□□ -1.53
APP-217ENST00000548570 K7ENM7 598 aa5.5□□□□□ -1.53
APP-217ENST00000548570 ACKR2O00590 384 aa5.5□□□□□ -1.53
APP-217ENST00000548570 TLR3O15455 904 aaKnown RBP5.5□□□□□ -1.53
APP-217ENST00000548570 ACRP10323 421 aa5.5□□□□□ -1.53
APP-217ENST00000548570 ATF7P17544 494 aaPredicted RBP5.5□□□□□ -1.53
APP-217ENST00000548570 TMOD1P28289 359 aa5.5□□□□□ -1.53
APP-217ENST00000548570 DNM2P50570 870 aa5.5□□□□□ -1.53
APP-217ENST00000548570 DMP1Q13316 513 aaPredicted RBP5.5□□□□□ -1.53
APP-217ENST00000548570 BFSP2Q13515 415 aa5.5□□□□□ -1.53
APP-217ENST00000548570 PLEKHG4Q58EX7 1191 aa5.5□□□□□ -1.53
APP-217ENST00000548570 L1TD1Q5T7N2 865 aaKnown RBP5.5□□□□□ -1.53
APP-217ENST00000548570 ZNF658Q5TYW1 1059 aaPredicted RBP5.5□□□□□ -1.53
APP-217ENST00000548570 SCARA3Q6AZY7 606 aa5.5□□□□□ -1.53
APP-217ENST00000548570 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.5□□□□□ -1.53
APP-217ENST00000548570 SRGAP1Q7Z6B7 1085 aa5.5□□□□□ -1.53
APP-217ENST00000548570 GAS2L3Q86XJ1 694 aa5.5□□□□□ -1.53
APP-217ENST00000548570 IRF2BP1Q8IU81 584 aa5.5□□□□□ -1.53
APP-217ENST00000548570 NELFCDQ8IXH7 590 aa5.5□□□□□ -1.53
APP-217ENST00000548570 FAM178BQ8IXR5 827 aa5.5□□□□□ -1.53
APP-217ENST00000548570 CCDC65Q8IXS2 484 aa5.5□□□□□ -1.53
APP-217ENST00000548570 ZC3H3Q8IXZ2 948 aaKnown RBP5.5□□□□□ -1.53
APP-217ENST00000548570 TMEM130Q8N3G9 435 aa5.5□□□□□ -1.53
APP-217ENST00000548570 CEP120Q8N960 986 aa5.5□□□□□ -1.53
APP-217ENST00000548570 SMG8Q8ND04 991 aaKnown RBP5.5□□□□□ -1.53
APP-217ENST00000548570 DEPTORQ8TB45 409 aa5.5□□□□□ -1.53
APP-217ENST00000548570 NLRP7Q8WX94 980 aa5.5□□□□□ -1.53
APP-217ENST00000548570 BADQ92934 168 aa5.5□□□□□ -1.53
APP-217ENST00000548570 SMARCE1Q969G3 411 aa5.5□□□□□ -1.53
APP-217ENST00000548570 CPB2Q96IY4 423 aa5.5□□□□□ -1.53
APP-217ENST00000548570 CCDC43Q96MW1 224 aaKnown RBP5.5□□□□□ -1.53
APP-217ENST00000548570 ACO2Q99798 780 aaKnown RBP5.5□□□□□ -1.53
APP-217ENST00000548570 EIF2AQ9BY44 585 aaKnown RBP5.5□□□□□ -1.53
APP-217ENST00000548570 GCOM2Q9BZD3 368 aaPredicted RBP5.5□□□□□ -1.53
APP-217ENST00000548570 LRRC27Q9C0I9 530 aa5.5□□□□□ -1.53
APP-217ENST00000548570 HSD3B7Q9H2F3 369 aa5.5□□□□□ -1.53
APP-217ENST00000548570 MRPL44Q9H9J2 332 aaKnown RBP5.5□□□□□ -1.53
APP-217ENST00000548570 KMT5AQ9NQR1 393 aa5.5□□□□□ -1.53
APP-217ENST00000548570 PRDM5Q9NQX1 630 aaPredicted RBP5.5□□□□□ -1.53
APP-217ENST00000548570 AGPAT5Q9NUQ2 364 aa5.5□□□□□ -1.53
APP-217ENST00000548570 RNF19AQ9NV58 838 aa5.5□□□□□ -1.53
APP-217ENST00000548570 DMAC2Q9NW81 257 aa5.5□□□□□ -1.53
APP-217ENST00000548570 LARSQ9P2J5 1176 aaKnown RBP5.5□□□□□ -1.53
APP-217ENST00000548570 SEL1LQ9UBV2 794 aa5.5□□□□□ -1.53
APP-217ENST00000548570 ST3GAL5Q9UNP4 418 aa5.5□□□□□ -1.53
APP-217ENST00000548570 NOD1Q9Y239 953 aa5.5□□□□□ -1.53
APP-217ENST00000548570 STYXL1Q9Y6J8 313 aa5.5□□□□□ -1.53
APP-217ENST00000548570 SQORQ9Y6N5 450 aa5.5□□□□□ -1.53
APP-217ENST00000548570 PHLPP2Q6ZVD8 1323 aa5.49□□□□□ -1.53
APP-217ENST00000548570 CNTNAP2Q9UHC6 1331 aa5.49□□□□□ -1.53
APP-217ENST00000548570 TNRC18O15417 2968 aaPredicted RBP5.49□□□□□ -1.53
APP-217ENST00000548570 A0A0B4J269 797 aa5.49□□□□□ -1.53
APP-217ENST00000548570 TRIM49BA6NDI0 452 aa5.49□□□□□ -1.53
APP-217ENST00000548570 C9IYK1 514 aa5.49□□□□□ -1.53
APP-217ENST00000548570 INO80B-WBP1J3KQ70 363 aa5.49□□□□□ -1.53
APP-217ENST00000548570 K7ERI5 159 aa5.49□□□□□ -1.53
APP-217ENST00000548570 ENPP3O14638 875 aa5.49□□□□□ -1.53
APP-217ENST00000548570 RPS6KA5O75582 802 aa5.49□□□□□ -1.53
APP-217ENST00000548570 SMC2O95347 1197 aa5.49□□□□□ -1.53
APP-217ENST00000548570 GCNT3O95395 438 aa5.49□□□□□ -1.53
APP-217ENST00000548570 PRKCBP05771 671 aa5.49□□□□□ -1.53
APP-217ENST00000548570 MAGEA10P43363 369 aaPredicted RBP5.49□□□□□ -1.53
APP-217ENST00000548570 PHKA2P46019 1235 aa5.49□□□□□ -1.53
APP-217ENST00000548570 AFF1P51825 1210 aaKnown RBP5.49□□□□□ -1.53
APP-217ENST00000548570 EFNA5P52803 228 aa5.49□□□□□ -1.53
APP-217ENST00000548570 NLRP12P59046 1061 aa5.49□□□□□ -1.53
APP-217ENST00000548570 MCCD1P59942 119 aaPredicted RBP5.49□□□□□ -1.53
APP-217ENST00000548570 FAM189BP81408 668 aa5.49□□□□□ -1.53
APP-217ENST00000548570 CDC42EP1Q00587 391 aa5.49□□□□□ -1.53
APP-217ENST00000548570 PSMD2Q13200 908 aa5.49□□□□□ -1.53
APP-217ENST00000548570 TFDP1Q14186 410 aa5.49□□□□□ -1.53
APP-217ENST00000548570 NCAPHQ15003 741 aa5.49□□□□□ -1.53
APP-217ENST00000548570 PPP2R5AQ15172 486 aa5.49□□□□□ -1.53
APP-217ENST00000548570 KNOP1Q1ED39 458 aaKnown RBP5.49□□□□□ -1.53
APP-217ENST00000548570 SKOR2Q2VWA4 1001 aaPredicted RBP5.49□□□□□ -1.53
APP-217ENST00000548570 SEZ6Q53EL9 994 aa5.49□□□□□ -1.53
APP-217ENST00000548570 RASIP1Q5U651 963 aa5.49□□□□□ -1.53
APP-217ENST00000548570 ANKRD40Q6AI12 368 aa5.49□□□□□ -1.53
APP-217ENST00000548570 CENPPQ6IPU0 288 aa5.49□□□□□ -1.53
APP-217ENST00000548570 TTI2Q6NXR4 508 aa5.49□□□□□ -1.53
APP-217ENST00000548570 CRELD2Q6UXH1 353 aaPredicted RBP5.49□□□□□ -1.53
APP-217ENST00000548570 LRRC55Q6ZSA7 311 aa5.49□□□□□ -1.53
APP-217ENST00000548570 TSHZ1Q6ZSZ6 1077 aa5.49□□□□□ -1.53
APP-217ENST00000548570 TMCO2Q7Z6W1 182 aaPredicted RBP5.49□□□□□ -1.53
APP-217ENST00000548570 DEFB128Q7Z7B8 93 aa5.49□□□□□ -1.53
APP-217ENST00000548570 METTL3Q86U44 580 aaKnown RBP5.49□□□□□ -1.53
APP-217ENST00000548570 TMEM192Q8IY95 271 aa5.49□□□□□ -1.53
APP-217ENST00000548570 GUF1Q8N442 669 aaKnown RBP5.49□□□□□ -1.53
APP-217ENST00000548570 TRIML1Q8N9V2 468 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms