RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 FRMD5Q7Z6J6 570 aa31.39■■■□□ 2.62
BRF1-213ENST00000548421 ZBTB33Q86T24 672 aa31.39■■■□□ 2.62
BRF1-213ENST00000548421 USP38Q8NB14 1042 aa31.39■■■□□ 2.62
BRF1-213ENST00000548421 FBXL18Q96ME1 805 aa31.39■■■□□ 2.62
BRF1-213ENST00000548421 METTL14Q9HCE5 456 aaKnown RBP31.39■■■□□ 2.62
BRF1-213ENST00000548421 KIAA1586Q9HCI6 787 aa31.39■■■□□ 2.62
BRF1-213ENST00000548421 MAPK13O15264 365 aa31.38■■■□□ 2.61
BRF1-213ENST00000548421 EXTL3O43909 919 aa31.38■■■□□ 2.61
BRF1-213ENST00000548421 LDHAP00338 332 aaKnown RBP31.38■■■□□ 2.61
BRF1-213ENST00000548421 MTIF2P46199 727 aaKnown RBP31.38■■■□□ 2.61
BRF1-213ENST00000548421 LRRC26Q2I0M4 334 aa31.38■■■□□ 2.61
BRF1-213ENST00000548421 LRRC8DQ7L1W4 858 aa31.38■■■□□ 2.61
BRF1-213ENST00000548421 CDR2LQ86X02 465 aaPredicted RBP31.38■■■□□ 2.61
BRF1-213ENST00000548421 ZSWIM2Q8NEG5 633 aa31.38■■■□□ 2.61
BRF1-213ENST00000548421 ADPGKQ9BRR6 497 aa31.38■■■□□ 2.61
BRF1-213ENST00000548421 ARMCX3Q9UH62 379 aaPredicted RBP31.38■■■□□ 2.61
BRF1-213ENST00000548421 PIN4Q9Y237 131 aaKnown RBP31.38■■■□□ 2.61
BRF1-213ENST00000548421 GOLGA8IPA6NC78 632 aa31.37■■■□□ 2.61
BRF1-213ENST00000548421 GOLGA8JA6NMD2 632 aa31.37■■■□□ 2.61
BRF1-213ENST00000548421 GPR182O15218 404 aa31.37■■■□□ 2.61
BRF1-213ENST00000548421 GHRP10912 638 aa31.37■■■□□ 2.61
BRF1-213ENST00000548421 HARSP12081 509 aaKnown RBP31.37■■■□□ 2.61
BRF1-213ENST00000548421 LPIN1Q14693 890 aa31.37■■■□□ 2.61
BRF1-213ENST00000548421 SNRNP35Q16560 246 aaKnown RBP31.37■■■□□ 2.61
BRF1-213ENST00000548421 CDT1Q9H211 546 aa31.37■■■□□ 2.61
BRF1-213ENST00000548421 ST3GAL5Q9UNP4 418 aa31.37■■■□□ 2.61
BRF1-213ENST00000548421 AP5Z1O43299 807 aa31.36■■■□□ 2.61
BRF1-213ENST00000548421 MCF2P10911 925 aa31.36■■■□□ 2.61
BRF1-213ENST00000548421 APTXQ7Z2E3 356 aaKnown RBP31.36■■■□□ 2.61
BRF1-213ENST00000548421 APBB1IPQ7Z5R6 666 aaPredicted RBP31.36■■■□□ 2.61
BRF1-213ENST00000548421 UBE2Q1Q7Z7E8 422 aa31.36■■■□□ 2.61
BRF1-213ENST00000548421 RDH13Q8NBN7 331 aa31.36■■■□□ 2.61
BRF1-213ENST00000548421 FAM213AQ9BRX8 229 aa31.36■■■□□ 2.61
BRF1-213ENST00000548421 TUBGCP2Q9BSJ2 902 aa31.36■■■□□ 2.61
BRF1-213ENST00000548421 LRRC10BA6NIK2 292 aa31.35■■■□□ 2.61
BRF1-213ENST00000548421 OGTO15294 1046 aa31.35■■■□□ 2.61
BRF1-213ENST00000548421 PAK2Q13177 524 aa31.35■■■□□ 2.61
BRF1-213ENST00000548421 SLC27A1Q6PCB7 646 aa31.35■■■□□ 2.61
BRF1-213ENST00000548421 CCDC51Q96ER9 411 aa31.35■■■□□ 2.61
BRF1-213ENST00000548421 BORCS6Q96GS4 357 aa31.35■■■□□ 2.61
BRF1-213ENST00000548421 NOC4LQ9BVI4 516 aaKnown RBP31.35■■■□□ 2.61
BRF1-213ENST00000548421 AGO3Q9H9G7 860 aaKnown RBP31.35■■■□□ 2.61
BRF1-213ENST00000548421 TPM2P07951 284 aa31.34■■■□□ 2.61
BRF1-213ENST00000548421 PRKCSHP14314 528 aaPredicted RBP31.34■■■□□ 2.61
BRF1-213ENST00000548421 COPB1P53618 953 aaKnown RBP31.34■■■□□ 2.61
BRF1-213ENST00000548421 NFX1Q12986 1120 aaKnown RBP31.34■■■□□ 2.61
BRF1-213ENST00000548421 DCAF4L1Q3SXM0 396 aa31.34■■■□□ 2.61
BRF1-213ENST00000548421 INTS8Q75QN2 995 aaKnown RBP31.34■■■□□ 2.61
BRF1-213ENST00000548421 CBWD2Q8IUF1 395 aa31.34■■■□□ 2.61
BRF1-213ENST00000548421 TRIM59Q8IWR1 403 aa31.34■■■□□ 2.61
BRF1-213ENST00000548421 TRIM5Q9C035 493 aa31.34■■■□□ 2.61
BRF1-213ENST00000548421 HIPK3Q9H422 1215 aa31.34■■■□□ 2.61
BRF1-213ENST00000548421 ERVK-5Q9HDB9 667 aa31.34■■■□□ 2.61
BRF1-213ENST00000548421 TAB2Q9NYJ8 693 aa31.34■■■□□ 2.61
BRF1-213ENST00000548421 PADI3Q9ULW8 664 aa31.34■■■□□ 2.61
BRF1-213ENST00000548421 ZNF233A6NK53 670 aa31.33■■■□□ 2.61
BRF1-213ENST00000548421 FAM189A1O60320 539 aa31.33■■■□□ 2.61
BRF1-213ENST00000548421 CLTBP09497 229 aa31.33■■■□□ 2.61
BRF1-213ENST00000548421 CD52P31358 61 aa31.33■■■□□ 2.61
BRF1-213ENST00000548421 UBASH3AP57075 661 aa31.33■■■□□ 2.61
BRF1-213ENST00000548421 MBTPS1Q14703 1052 aa31.33■■■□□ 2.61
BRF1-213ENST00000548421 MAN2A1Q16706 1144 aa31.33■■■□□ 2.61
BRF1-213ENST00000548421 OSBPL7Q9BZF2 842 aa31.33■■■□□ 2.61
BRF1-213ENST00000548421 CHST12Q9NRB3 414 aa31.33■■■□□ 2.61
BRF1-213ENST00000548421 IFNKQ9P0W0 207 aa31.33■■■□□ 2.61
BRF1-213ENST00000548421 TBX21Q9UL17 535 aa31.33■■■□□ 2.61
BRF1-213ENST00000548421 MKI67P46013 3256 aaKnown RBP31.33■■■□□ 2.61
BRF1-213ENST00000548421 ADRB2P07550 413 aa31.33■■■□□ 2.61
BRF1-213ENST00000548421 KRT13P13646 458 aa31.33■■■□□ 2.61
BRF1-213ENST00000548421 ACOT2P49753 483 aa31.33■■■□□ 2.61
BRF1-213ENST00000548421 FILIP1LQ4L180 1135 aa31.33■■■□□ 2.61
BRF1-213ENST00000548421 CBFA2T2O43439 604 aa31.32■■■□□ 2.6
BRF1-213ENST00000548421 CRELD2Q6UXH1 353 aaPredicted RBP31.32■■■□□ 2.6
BRF1-213ENST00000548421 VPS16Q9H269 839 aa31.32■■■□□ 2.6
BRF1-213ENST00000548421 TMEM39AQ9NV64 488 aa31.32■■■□□ 2.6
BRF1-213ENST00000548421 A0A1B0GTH6 734 aa31.31■■■□□ 2.6
BRF1-213ENST00000548421 NPTXRO95502 500 aa31.31■■■□□ 2.6
BRF1-213ENST00000548421 PPP2R3AQ06190 1150 aa31.31■■■□□ 2.6
BRF1-213ENST00000548421 BFSP1Q12934 665 aa31.31■■■□□ 2.6
BRF1-213ENST00000548421 KYAT1Q16773 422 aa31.31■■■□□ 2.6
BRF1-213ENST00000548421 ZBTB41Q5SVQ8 909 aa31.31■■■□□ 2.6
BRF1-213ENST00000548421 THNSL1Q8IYQ7 743 aa31.31■■■□□ 2.6
BRF1-213ENST00000548421 MFSD14AQ96MC6 490 aa31.31■■■□□ 2.6
BRF1-213ENST00000548421 NAP1L5Q96NT1 182 aaPredicted RBP31.31■■■□□ 2.6
BRF1-213ENST00000548421 UTP18Q9Y5J1 556 aaKnown RBP eCLIP31.31■■■□□ 2.6
BRF1-213ENST00000548421 CAPN15O75808 1086 aa31.3■■■□□ 2.6
BRF1-213ENST00000548421 CYP24A1Q07973 514 aa31.3■■■□□ 2.6
BRF1-213ENST00000548421 SEZ6Q53EL9 994 aa31.3■■■□□ 2.6
BRF1-213ENST00000548421 UMODL1Q5DID0 1318 aa31.3■■■□□ 2.6
BRF1-213ENST00000548421 TRIM6Q9C030 488 aaPredicted RBP31.3■■■□□ 2.6
BRF1-213ENST00000548421 XPO4Q9C0E2 1151 aaKnown RBP31.3■■■□□ 2.6
BRF1-213ENST00000548421 RBAKQ9NYW8 714 aaPredicted RBP31.3■■■□□ 2.6
BRF1-213ENST00000548421 CPSF3Q9UKF6 684 aaKnown RBP31.3■■■□□ 2.6
BRF1-213ENST00000548421 PARNO95453 639 aaKnown RBP31.29■■■□□ 2.6
BRF1-213ENST00000548421 TPM3P06753 285 aa31.29■■■□□ 2.6
BRF1-213ENST00000548421 VWA3BQ502W6 1294 aa31.29■■■□□ 2.6
BRF1-213ENST00000548421 DCAF17Q5H9S7 520 aaPredicted RBP31.29■■■□□ 2.6
BRF1-213ENST00000548421 MIIPQ5JXC2 388 aa31.29■■■□□ 2.6
BRF1-213ENST00000548421 TWF2Q6IBS0 349 aaKnown RBP31.29■■■□□ 2.6
BRF1-213ENST00000548421 CEP120Q8N960 986 aa31.29■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms