RNA–Protein interactions for RNA: ENST00000547637.1

SMARCD1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-204ENST00000547637 MCPH1Q8NEM0 835 aa25.59■■□□□ 1.69
SMARCD1-204ENST00000547637 ASAP3Q8TDY4 903 aa25.59■■□□□ 1.69
SMARCD1-204ENST00000547637 ZFP42Q96MM3 310 aa25.59■■□□□ 1.69
SMARCD1-204ENST00000547637 SMOC2Q9H3U7 446 aa25.59■■□□□ 1.69
SMARCD1-204ENST00000547637 WDR6Q9NNW5 1121 aaKnown RBP25.59■■□□□ 1.69
SMARCD1-204ENST00000547637 ARID2Q68CP9 1835 aa25.58■■□□□ 1.69
SMARCD1-204ENST00000547637 FAM205CA6NFA0 338 aa25.58■■□□□ 1.69
SMARCD1-204ENST00000547637 BTBD18B2RXH4 712 aa25.58■■□□□ 1.69
SMARCD1-204ENST00000547637 TADA2AO75478 443 aa25.58■■□□□ 1.69
SMARCD1-204ENST00000547637 GRIK3Q13003 919 aa25.58■■□□□ 1.69
SMARCD1-204ENST00000547637 SAFBQ15424 915 aaKnown RBP eCLIP25.58■■□□□ 1.69
SMARCD1-204ENST00000547637 TMEM132AQ24JP5 1023 aa25.58■■□□□ 1.69
SMARCD1-204ENST00000547637 TAS1R1Q7RTX1 841 aa25.58■■□□□ 1.69
SMARCD1-204ENST00000547637 ZBTB8OSQ8IWT0 167 aa25.58■■□□□ 1.69
SMARCD1-204ENST00000547637 DIS3L2Q8IYB7 885 aaKnown RBP25.58■■□□□ 1.69
SMARCD1-204ENST00000547637 TNFRSF25Q93038 417 aa25.58■■□□□ 1.69
SMARCD1-204ENST00000547637 GTF3C6Q969F1 213 aa25.58■■□□□ 1.69
SMARCD1-204ENST00000547637 NXPE3Q969Y0 559 aa25.58■■□□□ 1.69
SMARCD1-204ENST00000547637 PRIMPOLQ96LW4 560 aa25.58■■□□□ 1.69
SMARCD1-204ENST00000547637 RTP3Q9BQQ7 232 aa25.58■■□□□ 1.69
SMARCD1-204ENST00000547637 POLR3FQ9H1D9 316 aaPredicted RBP25.58■■□□□ 1.69
SMARCD1-204ENST00000547637 PRMT7Q9NVM4 692 aaPredicted RBP25.58■■□□□ 1.69
SMARCD1-204ENST00000547637 MIOSQ9NXC5 875 aa25.58■■□□□ 1.69
SMARCD1-204ENST00000547637 DAXXQ9UER7 740 aaPredicted RBP25.58■■□□□ 1.69
SMARCD1-204ENST00000547637 DUSP12Q9UNI6 340 aa25.58■■□□□ 1.69
SMARCD1-204ENST00000547637 ZMYM2Q9UBW7 1377 aa25.57■■□□□ 1.68
SMARCD1-204ENST00000547637 A0A1B0GUA9 196 aa25.57■■□□□ 1.68
SMARCD1-204ENST00000547637 LRRIQ4A6NIV6 560 aa25.57■■□□□ 1.68
SMARCD1-204ENST00000547637 NPTXRO95502 500 aa25.57■■□□□ 1.68
SMARCD1-204ENST00000547637 FDPSP14324 419 aaKnown RBP25.57■■□□□ 1.68
SMARCD1-204ENST00000547637 RFX1P22670 979 aa25.57■■□□□ 1.68
SMARCD1-204ENST00000547637 GLRA2P23416 452 aa25.57■■□□□ 1.68
SMARCD1-204ENST00000547637 RNF168Q8IYW5 571 aaPredicted RBP25.57■■□□□ 1.68
SMARCD1-204ENST00000547637 NECAB1Q8N987 351 aa25.57■■□□□ 1.68
SMARCD1-204ENST00000547637 PIGOQ8TEQ8 1089 aa25.57■■□□□ 1.68
SMARCD1-204ENST00000547637 SMG7Q92540 1137 aaKnown RBP25.57■■□□□ 1.68
SMARCD1-204ENST00000547637 NXF3Q9H4D5 531 aaKnown RBP25.57■■□□□ 1.68
SMARCD1-204ENST00000547637 FNIP2Q9P278 1114 aa25.57■■□□□ 1.68
SMARCD1-204ENST00000547637 ADAM28Q9UKQ2 775 aa25.57■■□□□ 1.68
SMARCD1-204ENST00000547637 DENND4AQ7Z401 1863 aa25.56■■□□□ 1.68
SMARCD1-204ENST00000547637 PROB1E7EW31 1015 aa25.56■■□□□ 1.68
SMARCD1-204ENST00000547637 STK25O00506 426 aa25.56■■□□□ 1.68
SMARCD1-204ENST00000547637 USO1O60763 962 aaKnown RBP25.56■■□□□ 1.68
SMARCD1-204ENST00000547637 ATP2B1P20020 1258 aa25.56■■□□□ 1.68
SMARCD1-204ENST00000547637 AKAP5P24588 427 aa25.56■■□□□ 1.68
SMARCD1-204ENST00000547637 AMHR2Q16671 573 aa25.56■■□□□ 1.68
SMARCD1-204ENST00000547637 ME3Q16798 604 aa25.56■■□□□ 1.68
SMARCD1-204ENST00000547637 FUT10Q6P4F1 479 aa25.56■■□□□ 1.68
SMARCD1-204ENST00000547637 ERMNQ8TAM6 284 aa25.56■■□□□ 1.68
SMARCD1-204ENST00000547637 C2orf40Q9H1Z8 148 aa25.56■■□□□ 1.68
SMARCD1-204ENST00000547637 CHST7Q9NS84 486 aa25.56■■□□□ 1.68
SMARCD1-204ENST00000547637 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP25.56■■□□□ 1.682e-11■■■■■ 27.9
SMARCD1-204ENST00000547637 PALB2Q86YC2 1186 aa25.55■■□□□ 1.68
SMARCD1-204ENST00000547637 MTMR9Q96QG7 549 aa25.55■■□□□ 1.68
SMARCD1-204ENST00000547637 NACC1Q96RE7 527 aa25.55■■□□□ 1.68
SMARCD1-204ENST00000547637 TUFT1Q9NNX1 390 aa25.55■■□□□ 1.68
SMARCD1-204ENST00000547637 ZDHHC7Q9NXF8 308 aa25.55■■□□□ 1.68
SMARCD1-204ENST00000547637 CLUHO75153 1309 aa25.55■■□□□ 1.68
SMARCD1-204ENST00000547637 DTNBO60941 627 aa25.54■■□□□ 1.68
SMARCD1-204ENST00000547637 AOC1P19801 751 aa25.54■■□□□ 1.68
SMARCD1-204ENST00000547637 MAEAQ7L5Y9 396 aa25.54■■□□□ 1.68
SMARCD1-204ENST00000547637 NSUN7Q8NE18 718 aaKnown RBP25.54■■□□□ 1.68
SMARCD1-204ENST00000547637 RIN2Q8WYP3 895 aaPredicted RBP25.54■■□□□ 1.68
SMARCD1-204ENST00000547637 ADPGKQ9BRR6 497 aa25.54■■□□□ 1.68
SMARCD1-204ENST00000547637 WNT16Q9UBV4 365 aa25.54■■□□□ 1.68
SMARCD1-204ENST00000547637 C2orf16Q68DN1 1984 aa25.54■■□□□ 1.68
SMARCD1-204ENST00000547637 N4BP3O15049 544 aa25.53■■□□□ 1.68
SMARCD1-204ENST00000547637 B4GALT5O43286 388 aa25.53■■□□□ 1.68
SMARCD1-204ENST00000547637 EFEMP2O95967 443 aa25.53■■□□□ 1.68
SMARCD1-204ENST00000547637 NBL1P41271 181 aa25.53■■□□□ 1.68
SMARCD1-204ENST00000547637 PPP4R3CPQ6ZMV5 832 aa25.53■■□□□ 1.68
SMARCD1-204ENST00000547637 SIX5Q8N196 739 aa25.53■■□□□ 1.68
SMARCD1-204ENST00000547637 NT5C3AQ9H0P0 336 aa25.53■■□□□ 1.68
SMARCD1-204ENST00000547637 KLK14Q9P0G3 267 aa25.53■■□□□ 1.68
SMARCD1-204ENST00000547637 EPS15L1Q9UBC2 864 aa25.53■■□□□ 1.68
SMARCD1-204ENST00000547637 SF3B1O75533 1304 aaKnown RBP eCLIP25.53■■□□□ 1.68
SMARCD1-204ENST00000547637 POTEMA6NI47 508 aa25.52■■□□□ 1.68
SMARCD1-204ENST00000547637 TGM5O43548 720 aa25.52■■□□□ 1.68
SMARCD1-204ENST00000547637 SPATA31D3P0C874 917 aa25.52■■□□□ 1.68
SMARCD1-204ENST00000547637 NEK4P51957 841 aa25.52■■□□□ 1.68
SMARCD1-204ENST00000547637 TUSC3Q13454 348 aa25.52■■□□□ 1.68
SMARCD1-204ENST00000547637 HSP90AA2PQ14568 343 aaPredicted RBP25.52■■□□□ 1.68
SMARCD1-204ENST00000547637 MAPK6Q16659 721 aa25.52■■□□□ 1.68
SMARCD1-204ENST00000547637 SPATA31D4Q6ZUB0 917 aa25.52■■□□□ 1.68
SMARCD1-204ENST00000547637 CDR2LQ86X02 465 aaPredicted RBP25.52■■□□□ 1.68
SMARCD1-204ENST00000547637 GPR62Q9BZJ7 368 aa25.52■■□□□ 1.68
SMARCD1-204ENST00000547637 MTCL1Q9Y4B5 1905 aaKnown RBP25.52■■□□□ 1.68
SMARCD1-204ENST00000547637 PTPRZ1P23471 2315 aaPredicted RBP25.52■■□□□ 1.68
SMARCD1-204ENST00000547637 RFPL2O75678 378 aa25.51■■□□□ 1.67
SMARCD1-204ENST00000547637 THP07101 528 aa25.51■■□□□ 1.67
SMARCD1-204ENST00000547637 MYBP10242 640 aa25.51■■□□□ 1.67
SMARCD1-204ENST00000547637 MCM7P33993 719 aa25.51■■□□□ 1.67
SMARCD1-204ENST00000547637 FOSBP53539 338 aa25.51■■□□□ 1.67
SMARCD1-204ENST00000547637 ELAVL2Q12926 359 aaKnown RBP25.51■■□□□ 1.67
SMARCD1-204ENST00000547637 PPP2R5AQ15172 486 aa25.51■■□□□ 1.67
SMARCD1-204ENST00000547637 FAM187BQ17R55 369 aa25.51■■□□□ 1.67
SMARCD1-204ENST00000547637 PDXDC1Q6P996 788 aa25.51■■□□□ 1.67
SMARCD1-204ENST00000547637 APBB1IPQ7Z5R6 666 aaPredicted RBP25.51■■□□□ 1.67
SMARCD1-204ENST00000547637 CATSPER3Q86XQ3 398 aa25.51■■□□□ 1.67
SMARCD1-204ENST00000547637 GLYCTKQ8IVS8 523 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms