RNA–Protein interactions for RNA: ENST00000546820.5

PTCH1-213, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-213ENST00000546820 CCDC94Q9BW85 323 aaPredicted RBP15.06■□□□□ 0
PTCH1-213ENST00000546820 TMEM117Q9H0C3 514 aa15.06■□□□□ 0
PTCH1-213ENST00000546820 GBP3Q9H0R5 595 aa15.06■□□□□ 0
PTCH1-213ENST00000546820 RSAD1Q9HA92 442 aa15.06■□□□□ 0
PTCH1-213ENST00000546820 CGNQ9P2M7 1197 aaKnown RBP15.06■□□□□ 0
PTCH1-213ENST00000546820 KANSL3Q9P2N6 904 aa15.06■□□□□ 0
PTCH1-213ENST00000546820 ANKFY1Q9P2R3 1169 aa15.06■□□□□ 0
PTCH1-213ENST00000546820 PARP2Q9UGN5 583 aa15.06■□□□□ 0
PTCH1-213ENST00000546820 FGFR1P11362 822 aa15.05■□□□□ -0
PTCH1-213ENST00000546820 HARSP12081 509 aaKnown RBP15.05■□□□□ -0
PTCH1-213ENST00000546820 YARSP54577 528 aaKnown RBP15.05■□□□□ -0
PTCH1-213ENST00000546820 BTG3Q14201 252 aaPredicted RBP15.05■□□□□ -0
PTCH1-213ENST00000546820 HSP90AA2PQ14568 343 aaPredicted RBP15.05■□□□□ -0
PTCH1-213ENST00000546820 KNOP1Q1ED39 458 aaKnown RBP15.05■□□□□ -0
PTCH1-213ENST00000546820 HABP4Q5JVS0 413 aaKnown RBP15.05■□□□□ -0
PTCH1-213ENST00000546820 ZNF658Q5TYW1 1059 aaPredicted RBP15.05■□□□□ -0
PTCH1-213ENST00000546820 CMTR2Q8IYT2 770 aaKnown RBP15.05■□□□□ -0
PTCH1-213ENST00000546820 FIBCD1Q8N539 461 aa15.05■□□□□ -0
PTCH1-213ENST00000546820 GOLGA5Q8TBA6 731 aa15.05■□□□□ -0
PTCH1-213ENST00000546820 URGCPQ8TCY9 931 aa15.05■□□□□ -0
PTCH1-213ENST00000546820 SCFD1Q8WVM8 642 aa15.05■□□□□ -0
PTCH1-213ENST00000546820 POMGNT1Q8WZA1 660 aa15.05■□□□□ -0
PTCH1-213ENST00000546820 LPPQ93052 612 aa15.05■□□□□ -0
PTCH1-213ENST00000546820 ZNF689Q96CS4 500 aaPredicted RBP15.05■□□□□ -0
PTCH1-213ENST00000546820 ACAP3Q96P50 834 aa15.05■□□□□ -0
PTCH1-213ENST00000546820 MSTO1Q9BUK6 570 aa15.05■□□□□ -0
PTCH1-213ENST00000546820 APOL6Q9BWW8 343 aa15.05■□□□□ -0
PTCH1-213ENST00000546820 MRPL9Q9BYD2 267 aaKnown RBP15.05■□□□□ -0
PTCH1-213ENST00000546820 PBX4Q9BYU1 374 aa15.05■□□□□ -0
PTCH1-213ENST00000546820 NUP62CLQ9H1M0 184 aa15.05■□□□□ -0
PTCH1-213ENST00000546820 CDT1Q9H211 546 aa15.05■□□□□ -0
PTCH1-213ENST00000546820 CLSTN2Q9H4D0 955 aa15.05■□□□□ -0
PTCH1-213ENST00000546820 SLC28A3Q9HAS3 691 aa15.05■□□□□ -0
PTCH1-213ENST00000546820 STYXL1Q9Y6J8 313 aa15.05■□□□□ -0
PTCH1-213ENST00000546820 A0A0B4J269 797 aa15.04■□□□□ -0
PTCH1-213ENST00000546820 TBKBP1A7MCY6 615 aa15.04■□□□□ -0
PTCH1-213ENST00000546820 KIAA0391O15091 583 aaKnown RBP15.04■□□□□ -0
PTCH1-213ENST00000546820 OGTO15294 1046 aa15.04■□□□□ -0
PTCH1-213ENST00000546820 OFD1O75665 1012 aa15.04■□□□□ -0
PTCH1-213ENST00000546820 LDHAP00338 332 aaKnown RBP15.04■□□□□ -0
PTCH1-213ENST00000546820 ATF7P17544 494 aaPredicted RBP15.04■□□□□ -0
PTCH1-213ENST00000546820 GARTP22102 1010 aa15.04■□□□□ -0
PTCH1-213ENST00000546820 GRM5P41594 1212 aa15.04■□□□□ -0
PTCH1-213ENST00000546820 KCNA1Q09470 495 aa15.04■□□□□ -0
PTCH1-213ENST00000546820 BMT2Q1RMZ1 405 aa15.04■□□□□ -0
PTCH1-213ENST00000546820 NOMO2Q5JPE7 1267 aa15.04■□□□□ -0
PTCH1-213ENST00000546820 AGMOQ6ZNB7 445 aa15.04■□□□□ -0
PTCH1-213ENST00000546820 HS2ST1Q7LGA3 356 aa15.04■□□□□ -0
PTCH1-213ENST00000546820 NELFCDQ8IXH7 590 aa15.04■□□□□ -0
PTCH1-213ENST00000546820 THNSL1Q8IYQ7 743 aa15.04■□□□□ -0
PTCH1-213ENST00000546820 GLIS3Q8NEA6 775 aa15.04■□□□□ -0
PTCH1-213ENST00000546820 HELQQ8TDG4 1101 aa15.04■□□□□ -0
PTCH1-213ENST00000546820 TIFAQ96CG3 184 aa15.04■□□□□ -0
PTCH1-213ENST00000546820 FGFBP2Q9BYJ0 223 aa15.04■□□□□ -0
PTCH1-213ENST00000546820 NXF3Q9H4D5 531 aaKnown RBP15.04■□□□□ -0
PTCH1-213ENST00000546820 TOPORSQ9NS56 1045 aaPredicted RBP15.04■□□□□ -0
PTCH1-213ENST00000546820 SNTG2Q9NY99 539 aa15.04■□□□□ -0
PTCH1-213ENST00000546820 KIAA1468Q9P260 1216 aa15.04■□□□□ -0
PTCH1-213ENST00000546820 HES2Q9Y543 173 aa15.04■□□□□ -0
PTCH1-213ENST00000546820 CARNS1A5YM72 827 aa15.03■□□□□ -0
PTCH1-213ENST00000546820 ANKRD63C9JTQ0 380 aa15.03■□□□□ -0
PTCH1-213ENST00000546820 CLTAP09496 248 aa15.03■□□□□ -0
PTCH1-213ENST00000546820 AKAP5P24588 427 aa15.03■□□□□ -0
PTCH1-213ENST00000546820 DNAJB2P25686 324 aa15.03■□□□□ -0
PTCH1-213ENST00000546820 PBX2P40425 430 aa15.03■□□□□ -0
PTCH1-213ENST00000546820 PPP1R2P41236 205 aa15.03■□□□□ -0
PTCH1-213ENST00000546820 RNASELQ05823 741 aaKnown RBP15.03■□□□□ -0
PTCH1-213ENST00000546820 STIM1Q13586 685 aa15.03■□□□□ -0
PTCH1-213ENST00000546820 SPOUT1Q5T280 376 aaKnown RBP15.03■□□□□ -0
PTCH1-213ENST00000546820 GUF1Q8N442 669 aaKnown RBP15.03■□□□□ -0
PTCH1-213ENST00000546820 KIAA0895Q8NCT3 520 aa15.03■□□□□ -0
PTCH1-213ENST00000546820 GPT2Q8TD30 523 aa15.03■□□□□ -0
PTCH1-213ENST00000546820 SP7Q8TDD2 431 aaPredicted RBP15.03■□□□□ -0
PTCH1-213ENST00000546820 ERCC4Q92889 916 aaPredicted RBP15.03■□□□□ -0
PTCH1-213ENST00000546820 CASD1Q96PB1 797 aa15.03■□□□□ -0
PTCH1-213ENST00000546820 RPS6KC1Q96S38 1066 aa15.03■□□□□ -0
PTCH1-213ENST00000546820 RNF39Q9H2S5 420 aa15.03■□□□□ -0
PTCH1-213ENST00000546820 AAASQ9NRG9 546 aa15.03■□□□□ -0
PTCH1-213ENST00000546820 AGO2Q9UKV8 859 aaKnown RBP15.03■□□□□ -0
PTCH1-213ENST00000546820 GDAQ9Y2T3 454 aa15.03■□□□□ -0
PTCH1-213ENST00000546820 RWDD3Q9Y3V2 267 aa15.03■□□□□ -0
PTCH1-213ENST00000546820 ZMYM2Q9UBW7 1377 aa15.02■□□□□ -0
PTCH1-213ENST00000546820 PDXKO00764 312 aa15.02■□□□□ -0
PTCH1-213ENST00000546820 ABLIM1O14639 778 aa15.02■□□□□ -0
PTCH1-213ENST00000546820 CALUO43852 315 aaPredicted RBP15.02■□□□□ -0
PTCH1-213ENST00000546820 CA3P07451 260 aa15.02■□□□□ -0
PTCH1-213ENST00000546820 MYOGP15173 224 aa15.02■□□□□ -0
PTCH1-213ENST00000546820 OSTNP61366 133 aa15.02■□□□□ -0
PTCH1-213ENST00000546820 POU5F1Q01860 360 aaKnown RBP15.02■□□□□ -0
PTCH1-213ENST00000546820 PAN2Q504Q3 1202 aaKnown RBP15.02■□□□□ -0
PTCH1-213ENST00000546820 CLLU1OSQ5K130 101 aa15.02■□□□□ -0
PTCH1-213ENST00000546820 ARMCX5Q6P1M9 558 aa15.02■□□□□ -0
PTCH1-213ENST00000546820 SLC39A4Q6P5W5 647 aa15.02■□□□□ -0
PTCH1-213ENST00000546820 TRIML1Q8N9V2 468 aa15.02■□□□□ -0
PTCH1-213ENST00000546820 SAMD11Q96NU1 681 aa15.02■□□□□ -0
PTCH1-213ENST00000546820 FAM193BQ96PV7 902 aaPredicted RBP15.02■□□□□ -0
PTCH1-213ENST00000546820 NKX2-4Q9H2Z4 354 aa15.02■□□□□ -0
PTCH1-213ENST00000546820 RPF1Q9H9Y2 349 aaKnown RBP15.02■□□□□ -0
PTCH1-213ENST00000546820 PLEKHA5Q9HAU0 1116 aa15.02■□□□□ -0
PTCH1-213ENST00000546820 KIAA1586Q9HCI6 787 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms