RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 ZNF746Q6NUN9 644 aaPredicted RBP15.21■□□□□ 0.03
SRP54-202ENST00000546080 KSR1Q8IVT5 923 aa15.21■□□□□ 0.03
SRP54-202ENST00000546080 MARCH10Q8NA82 808 aaPredicted RBP15.21■□□□□ 0.03
SRP54-202ENST00000546080 CD101Q93033 1021 aa15.21■□□□□ 0.03
SRP54-202ENST00000546080 FAM163AQ96GL9 167 aaPredicted RBP15.21■□□□□ 0.03
SRP54-202ENST00000546080 CRAMP1Q96RY5 1269 aa15.21■□□□□ 0.03
SRP54-202ENST00000546080 YIPF3Q9GZM5 350 aa15.21■□□□□ 0.03
SRP54-202ENST00000546080 ZFATQ9P243 1243 aa15.21■□□□□ 0.03
SRP54-202ENST00000546080 ADGRA3Q8IWK6 1321 aa15.21■□□□□ 0.03
SRP54-202ENST00000546080 ENO4A6NNW6 628 aa15.21■□□□□ 0.02
SRP54-202ENST00000546080 THAP12O43422 761 aa15.21■□□□□ 0.02
SRP54-202ENST00000546080 RAD21O60216 631 aa15.21■□□□□ 0.02
SRP54-202ENST00000546080 TTC4O95801 387 aa15.21■□□□□ 0.02
SRP54-202ENST00000546080 GRAPQ13588 217 aa15.21■□□□□ 0.02
SRP54-202ENST00000546080 MFSD14BQ5SR56 506 aa15.21■□□□□ 0.02
SRP54-202ENST00000546080 TRIM68Q6AZZ1 485 aa15.21■□□□□ 0.02
SRP54-202ENST00000546080 PPP1R21Q6ZMI0 780 aa15.21■□□□□ 0.02
SRP54-202ENST00000546080 GRAPLQ8TC17 118 aaPredicted RBP15.21■□□□□ 0.02
SRP54-202ENST00000546080 FAM20AQ96MK3 541 aa15.21■□□□□ 0.02
SRP54-202ENST00000546080 EIF2AK1Q9BQI3 630 aaKnown RBP15.21■□□□□ 0.02
SRP54-202ENST00000546080 PITPNM3Q9BZ71 974 aa15.21■□□□□ 0.02
SRP54-202ENST00000546080 LRRC19Q9H756 370 aa15.21■□□□□ 0.02
SRP54-202ENST00000546080 UBE2TQ9NPD8 197 aaPredicted RBP15.21■□□□□ 0.02
SRP54-202ENST00000546080 DNAJC17Q9NVM6 304 aaKnown RBP15.21■□□□□ 0.02
SRP54-202ENST00000546080 GAKO14976 1311 aa15.2■□□□□ 0.02
SRP54-202ENST00000546080 EME2A4GXA9 379 aaPredicted RBP15.2■□□□□ 0.02
SRP54-202ENST00000546080 A6NHS1 94 aa15.2■□□□□ 0.02
SRP54-202ENST00000546080 MPHOSPH10O00566 681 aaKnown RBP15.2■□□□□ 0.02
SRP54-202ENST00000546080 MEIS2O14770 477 aa15.2■□□□□ 0.02
SRP54-202ENST00000546080 ATMINO43313 823 aaPredicted RBP15.2■□□□□ 0.02
SRP54-202ENST00000546080 ATP5HO75947 161 aa15.2■□□□□ 0.02
SRP54-202ENST00000546080 ITIH2P19823 946 aa15.2■□□□□ 0.02
SRP54-202ENST00000546080 RWDD2BP57060 319 aa15.2■□□□□ 0.02
SRP54-202ENST00000546080 BFSP1Q12934 665 aa15.2■□□□□ 0.02
SRP54-202ENST00000546080 SETDB1Q15047 1291 aa15.2■□□□□ 0.02
SRP54-202ENST00000546080 PARP6Q2NL67 630 aa15.2■□□□□ 0.02
SRP54-202ENST00000546080 SGO2Q562F6 1265 aa15.2■□□□□ 0.02
SRP54-202ENST00000546080 RHBDF2Q6PJF5 856 aa15.2■□□□□ 0.02
SRP54-202ENST00000546080 STXBP4Q6ZWJ1 553 aa15.2■□□□□ 0.02
SRP54-202ENST00000546080 VSIG1Q86XK7 387 aa15.2■□□□□ 0.02
SRP54-202ENST00000546080 ANKLE1Q8NAG6 615 aa15.2■□□□□ 0.02
SRP54-202ENST00000546080 UTP4Q969X6 686 aaKnown RBP15.2■□□□□ 0.02
SRP54-202ENST00000546080 LENG9Q96B70 501 aa15.2■□□□□ 0.02
SRP54-202ENST00000546080 SNF8Q96H20 258 aa15.2■□□□□ 0.02
SRP54-202ENST00000546080 SH3GL3Q99963 347 aa15.2■□□□□ 0.02
SRP54-202ENST00000546080 POLR3CQ9BUI4 534 aaPredicted RBP15.2■□□□□ 0.02
SRP54-202ENST00000546080 PARVGQ9HBI0 331 aa15.2■□□□□ 0.02
SRP54-202ENST00000546080 AGPAT3Q9NRZ7 376 aa15.2■□□□□ 0.02
SRP54-202ENST00000546080 RGL1Q9NZL6 768 aa15.2■□□□□ 0.02
SRP54-202ENST00000546080 TBK1Q9UHD2 729 aa15.2■□□□□ 0.02
SRP54-202ENST00000546080 NARFQ9UHQ1 456 aa15.2■□□□□ 0.02
SRP54-202ENST00000546080 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.2■□□□□ 0.02
SRP54-202ENST00000546080 COL24A1Q17RW2 1714 aa15.2■□□□□ 0.02
SRP54-202ENST00000546080 UBE4BO95155 1302 aa15.2■□□□□ 0.02
SRP54-202ENST00000546080 FAM86B1E9PN63 330 aa15.19■□□□□ 0.02
SRP54-202ENST00000546080 MTA2O94776 668 aa15.19■□□□□ 0.02
SRP54-202ENST00000546080 FAM86B2P0C5J1 330 aa15.19■□□□□ 0.02
SRP54-202ENST00000546080 LINGO3P0C6S8 592 aa15.19■□□□□ 0.02
SRP54-202ENST00000546080 POLD1P28340 1107 aa15.19■□□□□ 0.02
SRP54-202ENST00000546080 KCNQ4P56696 695 aa15.19■□□□□ 0.02
SRP54-202ENST00000546080 SLC15A2Q16348 729 aa15.19■□□□□ 0.02
SRP54-202ENST00000546080 KYNUQ16719 465 aa15.19■□□□□ 0.02
SRP54-202ENST00000546080 SRRM1Q8IYB3 904 aaKnown RBP15.19■□□□□ 0.02
SRP54-202ENST00000546080 ZNF564Q8TBZ8 553 aaPredicted RBP15.19■□□□□ 0.02
SRP54-202ENST00000546080 PIGOQ8TEQ8 1089 aa15.19■□□□□ 0.02
SRP54-202ENST00000546080 C7orf43Q8WVR3 580 aa15.19■□□□□ 0.02
SRP54-202ENST00000546080 C1orf54Q8WWF1 131 aa15.19■□□□□ 0.02
SRP54-202ENST00000546080 CRYGNQ8WXF5 182 aa15.19■□□□□ 0.02
SRP54-202ENST00000546080 SLCO2A1Q92959 643 aa15.19■□□□□ 0.02
SRP54-202ENST00000546080 BTBD6Q96KE9 485 aa15.19■□□□□ 0.02
SRP54-202ENST00000546080 MYLK2Q9H1R3 596 aa15.19■□□□□ 0.02
SRP54-202ENST00000546080 RNPEPL1Q9HAU8 725 aa15.19■□□□□ 0.02
SRP54-202ENST00000546080 NKX1-2Q9UD57 310 aaPredicted RBP15.19■□□□□ 0.02
SRP54-202ENST00000546080 TULP1O00294 542 aaPredicted RBP15.19■□□□□ 0.02
SRP54-202ENST00000546080 TP73O15350 636 aa15.19■□□□□ 0.02
SRP54-202ENST00000546080 CLDN3O15551 220 aa15.19■□□□□ 0.02
SRP54-202ENST00000546080 GNAZP19086 355 aa15.19■□□□□ 0.02
SRP54-202ENST00000546080 TAC1P20366 129 aa15.19■□□□□ 0.02
SRP54-202ENST00000546080 POLGP54098 1239 aaPredicted RBP15.19■□□□□ 0.02
SRP54-202ENST00000546080 IL9RQ01113 521 aa15.19■□□□□ 0.02
SRP54-202ENST00000546080 ADCY1Q08828 1119 aa15.19■□□□□ 0.02
SRP54-202ENST00000546080 SNX1Q13596 522 aa15.19■□□□□ 0.02
SRP54-202ENST00000546080 C15orf52Q6ZUT6 534 aaKnown RBP15.19■□□□□ 0.02
SRP54-202ENST00000546080 FAM47EQ6ZV65 393 aa15.19■□□□□ 0.02
SRP54-202ENST00000546080 CPNE8Q86YQ8 564 aa15.19■□□□□ 0.02
SRP54-202ENST00000546080 AGGF1Q8N302 714 aaeCLIP15.19■□□□□ 0.02
SRP54-202ENST00000546080 RDH13Q8NBN7 331 aa15.19■□□□□ 0.02
SRP54-202ENST00000546080 VTI1AQ96AJ9 217 aa15.19■□□□□ 0.02
SRP54-202ENST00000546080 NUP85Q9BW27 656 aa15.19■□□□□ 0.02
SRP54-202ENST00000546080 PLVAPQ9BX97 442 aa15.19■□□□□ 0.02
SRP54-202ENST00000546080 LRMDAQ9H2I8 198 aa15.19■□□□□ 0.02
SRP54-202ENST00000546080 DMAC2Q9NW81 257 aa15.19■□□□□ 0.02
SRP54-202ENST00000546080 VAV3Q9UKW4 847 aa15.19■□□□□ 0.02
SRP54-202ENST00000546080 EIF4E1BA6NMX2 242 aaKnown RBP15.18■□□□□ 0.02
SRP54-202ENST00000546080 E7ENQ6 273 aa15.18■□□□□ 0.02
SRP54-202ENST00000546080 MSH4O15457 936 aa15.18■□□□□ 0.02
SRP54-202ENST00000546080 EXOC3O60645 756 aa15.18■□□□□ 0.02
SRP54-202ENST00000546080 TCEA3O75764 348 aa15.18■□□□□ 0.02
SRP54-202ENST00000546080 CALB2P22676 271 aa15.18■□□□□ 0.02
SRP54-202ENST00000546080 ITGA8P53708 1063 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms