RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 CRYBB1P53674 252 aaPredicted RBP7.28□□□□□ -1.24
CDCA3-209ENST00000544610 PTPN5P54829 565 aa7.28□□□□□ -1.24
CDCA3-209ENST00000544610 FAM189BP81408 668 aa7.28□□□□□ -1.24
CDCA3-209ENST00000544610 RBM10P98175 930 aaKnown RBP7.28□□□□□ -1.24
CDCA3-209ENST00000544610 PLCB3Q01970 1234 aa7.28□□□□□ -1.24
CDCA3-209ENST00000544610 SIGLEC14Q08ET2 396 aa7.28□□□□□ -1.24
CDCA3-209ENST00000544610 TCF15Q12870 199 aa7.28□□□□□ -1.24
CDCA3-209ENST00000544610 KCNB1Q14721 858 aa7.28□□□□□ -1.24
CDCA3-209ENST00000544610 ZSCAN23Q3MJ62 389 aa7.28□□□□□ -1.24
CDCA3-209ENST00000544610 COBLL1Q53SF7 1204 aa7.28□□□□□ -1.24
CDCA3-209ENST00000544610 ZNF484Q5JVG2 852 aa7.28□□□□□ -1.24
CDCA3-209ENST00000544610 SPOUT1Q5T280 376 aaKnown RBP7.28□□□□□ -1.24
CDCA3-209ENST00000544610 FAM102BQ5T8I3 360 aa7.28□□□□□ -1.24
CDCA3-209ENST00000544610 RRAGBQ5VZM2 374 aa7.28□□□□□ -1.24
CDCA3-209ENST00000544610 PDE12Q6L8Q7 609 aaKnown RBP7.28□□□□□ -1.24
CDCA3-209ENST00000544610 CAVIN1Q6NZI2 390 aaKnown RBP7.28□□□□□ -1.24
CDCA3-209ENST00000544610 PDXDC2PQ6P474 469 aa7.28□□□□□ -1.24
CDCA3-209ENST00000544610 CABP7Q86V35 215 aa7.28□□□□□ -1.24
CDCA3-209ENST00000544610 FAM228AQ86W67 206 aa7.28□□□□□ -1.24
CDCA3-209ENST00000544610 SUGP1Q8IWZ8 645 aaKnown RBP7.28□□□□□ -1.24
CDCA3-209ENST00000544610 C4orf19Q8IY42 314 aa7.28□□□□□ -1.24
CDCA3-209ENST00000544610 EXOC8Q8IYI6 725 aa7.28□□□□□ -1.24
CDCA3-209ENST00000544610 THNSL1Q8IYQ7 743 aa7.28□□□□□ -1.24
CDCA3-209ENST00000544610 FBXL6Q8N531 539 aa7.28□□□□□ -1.24
CDCA3-209ENST00000544610 COLGALT1Q8NBJ5 622 aa7.28□□□□□ -1.24
CDCA3-209ENST00000544610 TTC13Q8NBP0 860 aa7.28□□□□□ -1.24
CDCA3-209ENST00000544610 CNNM3Q8NE01 707 aa7.28□□□□□ -1.24
CDCA3-209ENST00000544610 MICAL1Q8TDZ2 1067 aa7.28□□□□□ -1.24
CDCA3-209ENST00000544610 KCNN1Q92952 543 aa7.28□□□□□ -1.24
CDCA3-209ENST00000544610 PBXIP1Q96AQ6 731 aa7.28□□□□□ -1.24
CDCA3-209ENST00000544610 ASIC4Q96FT7 647 aa7.28□□□□□ -1.24
CDCA3-209ENST00000544610 EPSTI1Q96J88 318 aa7.28□□□□□ -1.24
CDCA3-209ENST00000544610 RPGRIP1Q96KN7 1286 aa7.28□□□□□ -1.24
CDCA3-209ENST00000544610 OSMRQ99650 979 aa7.28□□□□□ -1.24
CDCA3-209ENST00000544610 ADAM2Q99965 735 aa7.28□□□□□ -1.24
CDCA3-209ENST00000544610 MMTAG2Q9BU76 263 aaKnown RBP7.28□□□□□ -1.24
CDCA3-209ENST00000544610 GOLPH3LQ9H4A5 285 aa7.28□□□□□ -1.24
CDCA3-209ENST00000544610 CWH43Q9H720 699 aa7.28□□□□□ -1.24
CDCA3-209ENST00000544610 ELAC1Q9H777 363 aaKnown RBP7.28□□□□□ -1.24
CDCA3-209ENST00000544610 ZNF302Q9NR11 478 aa7.28□□□□□ -1.24
CDCA3-209ENST00000544610 TYW1Q9NV66 732 aaKnown RBP7.28□□□□□ -1.24
CDCA3-209ENST00000544610 RMND1Q9NWS8 449 aa7.28□□□□□ -1.24
CDCA3-209ENST00000544610 TMEM161AQ9NX61 479 aa7.28□□□□□ -1.24
CDCA3-209ENST00000544610 KIAA1468Q9P260 1216 aa7.28□□□□□ -1.24
CDCA3-209ENST00000544610 KCNG1Q9UIX4 513 aa7.28□□□□□ -1.24
CDCA3-209ENST00000544610 ST3GAL5Q9UNP4 418 aa7.28□□□□□ -1.24
CDCA3-209ENST00000544610 GINS2Q9Y248 185 aa7.28□□□□□ -1.24
CDCA3-209ENST00000544610 LZTS1Q9Y250 596 aa7.28□□□□□ -1.24
CDCA3-209ENST00000544610 KMT2EQ8IZD2 1858 aa7.28□□□□□ -1.24
CDCA3-209ENST00000544610 GPR32O75388 356 aa7.27□□□□□ -1.25
CDCA3-209ENST00000544610 FGFR1P11362 822 aa7.27□□□□□ -1.25
CDCA3-209ENST00000544610 CD46P15529 392 aa7.27□□□□□ -1.25
CDCA3-209ENST00000544610 IBSPP21815 317 aaPredicted RBP7.27□□□□□ -1.25
CDCA3-209ENST00000544610 ABCD1P33897 745 aa7.27□□□□□ -1.25
CDCA3-209ENST00000544610 STAT6P42226 847 aa7.27□□□□□ -1.25
CDCA3-209ENST00000544610 PRSS12P56730 875 aa7.27□□□□□ -1.25
CDCA3-209ENST00000544610 GRIN1Q05586 938 aa7.27□□□□□ -1.25
CDCA3-209ENST00000544610 DSC3Q14574 896 aa7.27□□□□□ -1.25
CDCA3-209ENST00000544610 POSTNQ15063 836 aa7.27□□□□□ -1.25
CDCA3-209ENST00000544610 PTPN21Q16825 1174 aa7.27□□□□□ -1.25
CDCA3-209ENST00000544610 KIZQ2M2Z5 673 aa7.27□□□□□ -1.25
CDCA3-209ENST00000544610 LONRF3Q496Y0 759 aa7.27□□□□□ -1.25
CDCA3-209ENST00000544610 SWSAP1Q6NVH7 229 aa7.27□□□□□ -1.25
CDCA3-209ENST00000544610 ANKRD54Q6NXT1 300 aa7.27□□□□□ -1.25
CDCA3-209ENST00000544610 MIS18BP1Q6P0N0 1132 aa7.27□□□□□ -1.25
CDCA3-209ENST00000544610 LRSAM1Q6UWE0 723 aa7.27□□□□□ -1.25
CDCA3-209ENST00000544610 ZNF454Q8N9F8 522 aa7.27□□□□□ -1.25
CDCA3-209ENST00000544610 SNX29Q8TEQ0 813 aa7.27□□□□□ -1.25
CDCA3-209ENST00000544610 ZDHHC16Q969W1 377 aa7.27□□□□□ -1.25
CDCA3-209ENST00000544610 CDK5RAP3Q96JB5 506 aa7.27□□□□□ -1.25
CDCA3-209ENST00000544610 CASD1Q96PB1 797 aa7.27□□□□□ -1.25
CDCA3-209ENST00000544610 NACC1Q96RE7 527 aa7.27□□□□□ -1.25
CDCA3-209ENST00000544610 C7orf25Q9BPX7 421 aa7.27□□□□□ -1.25
CDCA3-209ENST00000544610 TCF25Q9BQ70 676 aa7.27□□□□□ -1.25
CDCA3-209ENST00000544610 TMEM117Q9H0C3 514 aa7.27□□□□□ -1.25
CDCA3-209ENST00000544610 S1PR5Q9H228 398 aa7.27□□□□□ -1.25
CDCA3-209ENST00000544610 ZSWIM4Q9H7M6 989 aa7.27□□□□□ -1.25
CDCA3-209ENST00000544610 ATP6V0A4Q9HBG4 840 aa7.27□□□□□ -1.25
CDCA3-209ENST00000544610 ANO10Q9NW15 660 aa7.27□□□□□ -1.25
CDCA3-209ENST00000544610 DBR1Q9UK59 544 aaKnown RBP7.27□□□□□ -1.25
CDCA3-209ENST00000544610 DNM3Q9UQ16 869 aa7.27□□□□□ -1.25
CDCA3-209ENST00000544610 PCDHA10Q9Y5I2 948 aa7.27□□□□□ -1.25
CDCA3-209ENST00000544610 MAFBQ9Y5Q3 323 aaPredicted RBP7.27□□□□□ -1.25
CDCA3-209ENST00000544610 FNDC1Q4ZHG4 1894 aaPredicted RBP7.27□□□□□ -1.25
CDCA3-209ENST00000544610 ZNF318Q5VUA4 2279 aa7.27□□□□□ -1.25
CDCA3-209ENST00000544610 PIEZO1Q92508 2521 aa7.27□□□□□ -1.25
CDCA3-209ENST00000544610 KAT6AQ92794 2004 aa7.27□□□□□ -1.25
CDCA3-209ENST00000544610 RCCD1A6NED2 376 aa7.26□□□□□ -1.25
CDCA3-209ENST00000544610 HIDE1A8MVS5 230 aa7.26□□□□□ -1.25
CDCA3-209ENST00000544610 HOXA2O43364 376 aa7.26□□□□□ -1.25
CDCA3-209ENST00000544610 VTNP04004 478 aa7.26□□□□□ -1.25
CDCA3-209ENST00000544610 PSAPP07602 524 aa7.26□□□□□ -1.25
CDCA3-209ENST00000544610 SPATA31C1P0DKV0 1188 aa7.26□□□□□ -1.25
CDCA3-209ENST00000544610 HOXB8P17481 243 aaPredicted RBP7.26□□□□□ -1.25
CDCA3-209ENST00000544610 PLCG1P19174 1290 aa7.26□□□□□ -1.25
CDCA3-209ENST00000544610 RFX1P22670 979 aa7.26□□□□□ -1.25
CDCA3-209ENST00000544610 PPM1AP35813 382 aa7.26□□□□□ -1.25
CDCA3-209ENST00000544610 CCT6AP40227 531 aaKnown RBP7.26□□□□□ -1.25
CDCA3-209ENST00000544610 QARSP47897 775 aaKnown RBP7.26□□□□□ -1.25
CDCA3-209ENST00000544610 VCPP55072 806 aaKnown RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms