RNA–Protein interactions for RNA: ENST00000544301.6

VIM-209, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best)

Gene VIM, Length 2,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-209ENST00000544301 CELF4Q9BZC1 486 aaKnown RBP19.42■□□□□ 0.7
VIM-209ENST00000544301 XPNPEP1Q9NQW7 623 aa19.42■□□□□ 0.7
VIM-209ENST00000544301 SLC9A2Q9UBY0 812 aa19.42■□□□□ 0.7
VIM-209ENST00000544301 PPP1R1BQ9UD71 204 aaPredicted RBP19.42■□□□□ 0.7
VIM-209ENST00000544301 ATP2A1O14983 1001 aa19.42■□□□□ 0.7
VIM-209ENST00000544301 DAPK3O43293 454 aa19.42■□□□□ 0.7
VIM-209ENST00000544301 DGAT1O75907 488 aa19.42■□□□□ 0.7
VIM-209ENST00000544301 MMEP08473 750 aa19.42■□□□□ 0.7
VIM-209ENST00000544301 GTF2H1P32780 548 aa19.42■□□□□ 0.7
VIM-209ENST00000544301 IRAK1P51617 712 aa19.42■□□□□ 0.7
VIM-209ENST00000544301 PTENP60484 403 aa19.42■□□□□ 0.7
VIM-209ENST00000544301 ACTR2P61160 394 aa19.42■□□□□ 0.7
VIM-209ENST00000544301 FMO1Q01740 532 aa19.42■□□□□ 0.7
VIM-209ENST00000544301 SP4Q02446 784 aa19.42■□□□□ 0.7
VIM-209ENST00000544301 ZNF211Q13398 564 aaPredicted RBP19.42■□□□□ 0.7
VIM-209ENST00000544301 KCTD19Q17RG1 926 aaPredicted RBP19.42■□□□□ 0.7
VIM-209ENST00000544301 ABHD15Q6UXT9 468 aa19.42■□□□□ 0.7
VIM-209ENST00000544301 CATSPERGQ6ZRH7 1159 aa19.42■□□□□ 0.7
VIM-209ENST00000544301 FBXL13Q8NEE6 735 aa19.42■□□□□ 0.7
VIM-209ENST00000544301 TAS1R2Q8TE23 839 aa19.42■□□□□ 0.7
VIM-209ENST00000544301 CDHR1Q96JP9 859 aa19.42■□□□□ 0.7
VIM-209ENST00000544301 TEX13BQ9BXU2 312 aa19.42■□□□□ 0.7
VIM-209ENST00000544301 CAPS2Q9BXY5 557 aa19.42■□□□□ 0.7
VIM-209ENST00000544301 A1CFQ9NQ94 594 aaKnown RBP19.42■□□□□ 0.7
VIM-209ENST00000544301 RAB20Q9NX57 234 aa19.42■□□□□ 0.7
VIM-209ENST00000544301 TMOD4Q9NZQ9 345 aa19.42■□□□□ 0.7
VIM-209ENST00000544301 SEPT9Q9UHD8 586 aaPredicted RBP19.42■□□□□ 0.7
VIM-209ENST00000544301 MTA2O94776 668 aa19.41■□□□□ 0.7
VIM-209ENST00000544301 RTP1P59025 263 aa19.41■□□□□ 0.7
VIM-209ENST00000544301 PRKCEQ02156 737 aa19.41■□□□□ 0.7
VIM-209ENST00000544301 NT5C1BQ96P26 610 aa19.41■□□□□ 0.7
VIM-209ENST00000544301 ACAD9Q9H845 621 aa19.41■□□□□ 0.7
VIM-209ENST00000544301 CYP26B1Q9NR63 512 aa19.41■□□□□ 0.7
VIM-209ENST00000544301 PLAAQ9Y263 795 aa19.41■□□□□ 0.7
VIM-209ENST00000544301 DOCK5Q9H7D0 1870 aa19.41■□□□□ 0.7
VIM-209ENST00000544301 LTBP3Q9NS15 1303 aa19.41■□□□□ 0.7
VIM-209ENST00000544301 MIF4GDA9UHW6 222 aaKnown RBP19.4■□□□□ 0.7
VIM-209ENST00000544301 SPATA31C2B4DYI2 1134 aa19.4■□□□□ 0.7
VIM-209ENST00000544301 HSD17B3P37058 310 aa19.4■□□□□ 0.7
VIM-209ENST00000544301 SKOR1P84550 965 aa19.4■□□□□ 0.7
VIM-209ENST00000544301 BRDTQ58F21 947 aaPredicted RBP19.4■□□□□ 0.7
VIM-209ENST00000544301 KCTD16Q68DU8 428 aa19.4■□□□□ 0.7
VIM-209ENST00000544301 SV2AQ7L0J3 742 aa19.4■□□□□ 0.7
VIM-209ENST00000544301 TAS1R3Q7RTX0 852 aa19.4■□□□□ 0.7
VIM-209ENST00000544301 GPD1LQ8N335 351 aa19.4■□□□□ 0.7
VIM-209ENST00000544301 SH2D3CQ8N5H7 860 aa19.4■□□□□ 0.7
VIM-209ENST00000544301 LRRC45Q96CN5 670 aa19.4■□□□□ 0.7
VIM-209ENST00000544301 CHORDC1Q9UHD1 332 aaPredicted RBP19.4■□□□□ 0.7
VIM-209ENST00000544301 UTP11Q9Y3A2 253 aaKnown RBP19.4■□□□□ 0.7
VIM-209ENST00000544301 TMEM110-MUSTN1A8MSY1 372 aa19.4■□□□□ 0.7
VIM-209ENST00000544301 HNRNPDLO14979 420 aaKnown RBP19.4■□□□□ 0.7
VIM-209ENST00000544301 SORBS3O60504 671 aa19.4■□□□□ 0.7
VIM-209ENST00000544301 CYP11B1P15538 503 aa19.4■□□□□ 0.7
VIM-209ENST00000544301 GARTP22102 1010 aa19.4■□□□□ 0.7
VIM-209ENST00000544301 CLUL1Q15846 466 aa19.4■□□□□ 0.7
VIM-209ENST00000544301 UAP1Q16222 522 aaPredicted RBP19.4■□□□□ 0.7
VIM-209ENST00000544301 ADAT2Q7Z6V5 191 aaKnown RBP19.4■□□□□ 0.7
VIM-209ENST00000544301 APOBEC3FQ8IUX4 373 aaKnown RBP19.4■□□□□ 0.7
VIM-209ENST00000544301 C1orf131Q8NDD1 294 aaKnown RBP19.4■□□□□ 0.7
VIM-209ENST00000544301 KRT35Q92764 455 aa19.4■□□□□ 0.7
VIM-209ENST00000544301 RPS6KC1Q96S38 1066 aa19.4■□□□□ 0.7
VIM-209ENST00000544301 ATP6V0A4Q9HBG4 840 aa19.4■□□□□ 0.7
VIM-209ENST00000544301 ERVK-5Q9HDB9 667 aa19.4■□□□□ 0.7
VIM-209ENST00000544301 PPFIA4O75335 1185 aa19.39■□□□□ 0.69
VIM-209ENST00000544301 STAM2O75886 525 aa19.39■□□□□ 0.69
VIM-209ENST00000544301 DLATP10515 647 aaKnown RBP19.39■□□□□ 0.69
VIM-209ENST00000544301 PPP2R5EQ16537 467 aa19.39■□□□□ 0.69
VIM-209ENST00000544301 DNAJC21Q5F1R6 531 aaKnown RBP19.39■□□□□ 0.69
VIM-209ENST00000544301 LRIG3Q6UXM1 1119 aa19.39■□□□□ 0.69
VIM-209ENST00000544301 USP37Q86T82 979 aa19.39■□□□□ 0.69
VIM-209ENST00000544301 UBL4BQ8N7F7 174 aa19.39■□□□□ 0.69
VIM-209ENST00000544301 KLRG1Q96E93 195 aa19.39■□□□□ 0.69
VIM-209ENST00000544301 IFT74Q96LB3 600 aa19.39■□□□□ 0.69
VIM-209ENST00000544301 ZSWIM1Q9BR11 485 aa19.39■□□□□ 0.69
VIM-209ENST00000544301 POLR3FQ9H1D9 316 aaPredicted RBP19.39■□□□□ 0.69
VIM-209ENST00000544301 FAM114A2Q9NRY5 505 aa19.39■□□□□ 0.69
VIM-209ENST00000544301 ARHGAP28Q9P2N2 729 aa19.39■□□□□ 0.69
VIM-209ENST00000544301 ZNF541Q9H0D2 1346 aa19.39■□□□□ 0.69
VIM-209ENST00000544301 GOLGA6L10A0A0M3HER8 536 aa19.39■□□□□ 0.69
VIM-209ENST00000544301 ATMINO43313 823 aaPredicted RBP19.39■□□□□ 0.69
VIM-209ENST00000544301 CYP1A2P05177 515 aa19.39■□□□□ 0.69
VIM-209ENST00000544301 COMTP21964 271 aa19.39■□□□□ 0.69
VIM-209ENST00000544301 COPB2P35606 906 aa19.39■□□□□ 0.69
VIM-209ENST00000544301 FLT3P36888 993 aa19.39■□□□□ 0.69
VIM-209ENST00000544301 MARCKSL1P49006 195 aa19.39■□□□□ 0.69
VIM-209ENST00000544301 CDR2Q01850 454 aa19.39■□□□□ 0.69
VIM-209ENST00000544301 ENPEPQ07075 957 aa19.39■□□□□ 0.69
VIM-209ENST00000544301 MESDQ14696 234 aa19.39■□□□□ 0.69
VIM-209ENST00000544301 GNPTABQ3T906 1256 aa19.39■□□□□ 0.69
VIM-209ENST00000544301 AADACL2Q6P093 401 aa19.39■□□□□ 0.69
VIM-209ENST00000544301 MIS18BP1Q6P0N0 1132 aa19.39■□□□□ 0.69
VIM-209ENST00000544301 TATDN2Q93075 761 aa19.39■□□□□ 0.69
VIM-209ENST00000544301 ELMO3Q96BJ8 720 aa19.39■□□□□ 0.69
VIM-209ENST00000544301 BICD1Q96G01 975 aa19.39■□□□□ 0.69
VIM-209ENST00000544301 FAM213AQ9BRX8 229 aa19.39■□□□□ 0.69
VIM-209ENST00000544301 TRIM51Q9BSJ1 452 aa19.39■□□□□ 0.69
VIM-209ENST00000544301 H0YGN5 161 aa19.38■□□□□ 0.69
VIM-209ENST00000544301 SUPT20HL2P0C7V6 817 aa19.38■□□□□ 0.69
VIM-209ENST00000544301 PDE6CP51160 858 aa19.38■□□□□ 0.69
VIM-209ENST00000544301 SUPT20HL1Q3ZLR7 823 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms