RNA–Protein interactions for RNA: ENST00000543768.1

SCNN1A-221, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCNN1A, Length 2,361 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-221ENST00000543768 POU5F1Q01860 360 aaKnown RBP17.36■□□□□ 0.37
SCNN1A-221ENST00000543768 SP4Q02446 784 aa17.36■□□□□ 0.37
SCNN1A-221ENST00000543768 PPFIA1Q13136 1202 aa17.36■□□□□ 0.37
SCNN1A-221ENST00000543768 CUL1Q13616 776 aa17.36■□□□□ 0.37
SCNN1A-221ENST00000543768 TTMPQ5BVD1 217 aa17.36■□□□□ 0.37
SCNN1A-221ENST00000543768 TAS1R3Q7RTX0 852 aa17.36■□□□□ 0.37
SCNN1A-221ENST00000543768 C10orf67Q8IYJ2 551 aa17.36■□□□□ 0.37
SCNN1A-221ENST00000543768 TRPM4Q8TD43 1214 aa17.36■□□□□ 0.37
SCNN1A-221ENST00000543768 SLITRK6Q9H5Y7 841 aa17.36■□□□□ 0.37
SCNN1A-221ENST00000543768 ALG6Q9Y672 507 aa17.36■□□□□ 0.37
SCNN1A-221ENST00000543768 GZMAP12544 262 aa17.35■□□□□ 0.37
SCNN1A-221ENST00000543768 RTP1P59025 263 aa17.35■□□□□ 0.37
SCNN1A-221ENST00000543768 GPC5P78333 572 aa17.35■□□□□ 0.37
SCNN1A-221ENST00000543768 IRX3P78415 501 aaPredicted RBP17.35■□□□□ 0.37
SCNN1A-221ENST00000543768 CYP24A1Q07973 514 aa17.35■□□□□ 0.37
SCNN1A-221ENST00000543768 PRPF4BQ13523 1007 aaKnown RBP17.35■□□□□ 0.37
SCNN1A-221ENST00000543768 CFAP58Q5T655 872 aa17.35■□□□□ 0.37
SCNN1A-221ENST00000543768 SRLQ86TD4 932 aa17.35■□□□□ 0.37
SCNN1A-221ENST00000543768 SLC47A2Q86VL8 602 aa17.35■□□□□ 0.37
SCNN1A-221ENST00000543768 DDX42Q86XP3 938 aaKnown RBP eCLIP17.35■□□□□ 0.37
SCNN1A-221ENST00000543768 MCPH1Q8NEM0 835 aa17.35■□□□□ 0.37
SCNN1A-221ENST00000543768 TAS1R2Q8TE23 839 aa17.35■□□□□ 0.37
SCNN1A-221ENST00000543768 POMGNT1Q8WZA1 660 aa17.35■□□□□ 0.37
SCNN1A-221ENST00000543768 CDHR1Q96JP9 859 aa17.35■□□□□ 0.37
SCNN1A-221ENST00000543768 RUFY1Q96T51 708 aa17.35■□□□□ 0.37
SCNN1A-221ENST00000543768 CYP26B1Q9NR63 512 aa17.35■□□□□ 0.37
SCNN1A-221ENST00000543768 LCMT1Q9UIC8 334 aa17.35■□□□□ 0.37
SCNN1A-221ENST00000543768 ZNF233A6NK53 670 aa17.35■□□□□ 0.37
SCNN1A-221ENST00000543768 TRIM66O15016 1216 aa17.35■□□□□ 0.37
SCNN1A-221ENST00000543768 HSPA9P38646 679 aaKnown RBP17.35■□□□□ 0.37
SCNN1A-221ENST00000543768 MFAP3P55082 362 aa17.35■□□□□ 0.37
SCNN1A-221ENST00000543768 SP2Q02086 613 aa17.35■□□□□ 0.37
SCNN1A-221ENST00000543768 PRKCEQ02156 737 aa17.35■□□□□ 0.37
SCNN1A-221ENST00000543768 LRRC31Q6UY01 552 aa17.35■□□□□ 0.37
SCNN1A-221ENST00000543768 ALG3Q92685 438 aa17.35■□□□□ 0.37
SCNN1A-221ENST00000543768 RNPC3Q96LT9 517 aaKnown RBP17.35■□□□□ 0.37
SCNN1A-221ENST00000543768 CTTNBP2NLQ9P2B4 639 aa17.35■□□□□ 0.37
SCNN1A-221ENST00000543768 SEPT9Q9UHD8 586 aaPredicted RBP17.35■□□□□ 0.37
SCNN1A-221ENST00000543768 SSC5DA1L4H1 1573 aa17.34■□□□□ 0.37
SCNN1A-221ENST00000543768 SPDYE16A6NNV3 312 aaPredicted RBP17.34■□□□□ 0.37
SCNN1A-221ENST00000543768 SORBS3O60504 671 aa17.34■□□□□ 0.37
SCNN1A-221ENST00000543768 SHOX2O60902 331 aaPredicted RBP17.34■□□□□ 0.37
SCNN1A-221ENST00000543768 STAM2O75886 525 aa17.34■□□□□ 0.37
SCNN1A-221ENST00000543768 KRT14P02533 472 aa17.34■□□□□ 0.37
SCNN1A-221ENST00000543768 FMO1Q01740 532 aa17.34■□□□□ 0.37
SCNN1A-221ENST00000543768 KCTD19Q17RG1 926 aaPredicted RBP17.34■□□□□ 0.37
SCNN1A-221ENST00000543768 BRDTQ58F21 947 aaPredicted RBP17.34■□□□□ 0.37
SCNN1A-221ENST00000543768 C11orf63Q6NUN7 778 aa17.34■□□□□ 0.37
SCNN1A-221ENST00000543768 FBXL13Q8NEE6 735 aa17.34■□□□□ 0.37
SCNN1A-221ENST00000543768 SEC14L1Q92503 715 aa17.34■□□□□ 0.37
SCNN1A-221ENST00000543768 NEUROG2Q9H2A3 272 aa17.34■□□□□ 0.37
SCNN1A-221ENST00000543768 RAB20Q9NX57 234 aa17.34■□□□□ 0.37
SCNN1A-221ENST00000543768 ARHGAP28Q9P2N2 729 aa17.34■□□□□ 0.37
SCNN1A-221ENST00000543768 AFG3L2Q9Y4W6 797 aa17.34■□□□□ 0.37
SCNN1A-221ENST00000543768 LOC285556D6RIA3 1793 aa17.34■□□□□ 0.37
SCNN1A-221ENST00000543768 TULP1O00294 542 aaPredicted RBP17.33■□□□□ 0.37
SCNN1A-221ENST00000543768 TTI1O43156 1089 aa17.33■□□□□ 0.37
SCNN1A-221ENST00000543768 MMEP08473 750 aa17.33■□□□□ 0.37
SCNN1A-221ENST00000543768 GTF2H1P32780 548 aa17.33■□□□□ 0.37
SCNN1A-221ENST00000543768 HLTFQ14527 1009 aaKnown RBP eCLIP17.33■□□□□ 0.37
SCNN1A-221ENST00000543768 SV2AQ7L0J3 742 aa17.33■□□□□ 0.37
SCNN1A-221ENST00000543768 MAATS1Q7Z4T9 603 aa17.33■□□□□ 0.37
SCNN1A-221ENST00000543768 CD302Q8IX05 232 aa17.33■□□□□ 0.37
SCNN1A-221ENST00000543768 GPD1LQ8N335 351 aa17.33■□□□□ 0.37
SCNN1A-221ENST00000543768 CCDC26Q8TAB7 109 aa17.33■□□□□ 0.37
SCNN1A-221ENST00000543768 CYP11B1P15538 503 aa17.33■□□□□ 0.36
SCNN1A-221ENST00000543768 GARTP22102 1010 aa17.33■□□□□ 0.36
SCNN1A-221ENST00000543768 ELMO3Q96BJ8 720 aa17.33■□□□□ 0.36
SCNN1A-221ENST00000543768 CELF4Q9BZC1 486 aaKnown RBP17.33■□□□□ 0.36
SCNN1A-221ENST00000543768 ATP6V0A4Q9HBG4 840 aa17.33■□□□□ 0.36
SCNN1A-221ENST00000543768 HOXC10Q9NYD6 342 aa17.33■□□□□ 0.36
SCNN1A-221ENST00000543768 TMOD4Q9NZQ9 345 aa17.33■□□□□ 0.36
SCNN1A-221ENST00000543768 CHORDC1Q9UHD1 332 aaPredicted RBP17.33■□□□□ 0.36
SCNN1A-221ENST00000543768 POLR2AP24928 1970 aaKnown RBP17.33■□□□□ 0.36
SCNN1A-221ENST00000543768 WDR90Q96KV7 1748 aa17.32■□□□□ 0.36
SCNN1A-221ENST00000543768 HNRNPDLO14979 420 aaKnown RBP17.32■□□□□ 0.36
SCNN1A-221ENST00000543768 MTA2O94776 668 aa17.32■□□□□ 0.36
SCNN1A-221ENST00000543768 ZNF211Q13398 564 aaPredicted RBP17.32■□□□□ 0.36
SCNN1A-221ENST00000543768 GNPTABQ3T906 1256 aa17.32■□□□□ 0.36
SCNN1A-221ENST00000543768 NAA35Q5VZE5 725 aa17.32■□□□□ 0.36
SCNN1A-221ENST00000543768 TATDN2Q93075 761 aa17.32■□□□□ 0.36
SCNN1A-221ENST00000543768 NT5C1BQ96P26 610 aa17.32■□□□□ 0.36
SCNN1A-221ENST00000543768 POLR3FQ9H1D9 316 aaPredicted RBP17.32■□□□□ 0.36
SCNN1A-221ENST00000543768 GGA3Q9NZ52 723 aa17.32■□□□□ 0.36
SCNN1A-221ENST00000543768 RRP15Q9Y3B9 282 aaKnown RBP17.32■□□□□ 0.36
SCNN1A-221ENST00000543768 SUPT20HL2P0C7V6 817 aa17.32■□□□□ 0.36
SCNN1A-221ENST00000543768 ATP4AP20648 1035 aa17.32■□□□□ 0.36
SCNN1A-221ENST00000543768 PTENP60484 403 aa17.32■□□□□ 0.36
SCNN1A-221ENST00000543768 ENPEPQ07075 957 aa17.32■□□□□ 0.36
SCNN1A-221ENST00000543768 FSTL1Q12841 308 aa17.32■□□□□ 0.36
SCNN1A-221ENST00000543768 SUPT20HL1Q3ZLR7 823 aa17.32■□□□□ 0.36
SCNN1A-221ENST00000543768 XKR3Q5GH77 459 aa17.32■□□□□ 0.36
SCNN1A-221ENST00000543768 NOL9Q5SY16 702 aaKnown RBP17.32■□□□□ 0.36
SCNN1A-221ENST00000543768 MIS18BP1Q6P0N0 1132 aa17.32■□□□□ 0.36
SCNN1A-221ENST00000543768 ZNF526Q8TF50 670 aaPredicted RBP17.32■□□□□ 0.36
SCNN1A-221ENST00000543768 DDX1Q92499 740 aaKnown RBP17.32■□□□□ 0.36
SCNN1A-221ENST00000543768 MAF1Q9H063 256 aa17.32■□□□□ 0.36
SCNN1A-221ENST00000543768 ERVK-5Q9HDB9 667 aa17.32■□□□□ 0.36
SCNN1A-221ENST00000543768 MYPNQ86TC9 1320 aa17.32■□□□□ 0.36
SCNN1A-221ENST00000543768 DAPK3O43293 454 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms