RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-219ENST00000543660 MYH6P13533 1939 aa5.54□□□□□ -1.52
NPIPB4-219ENST00000543660 DOCK8Q8NF50 2099 aa5.54□□□□□ -1.52
NPIPB4-219ENST00000543660 NBEAQ8NFP9 2946 aa5.54□□□□□ -1.52
NPIPB4-219ENST00000543660 LOC400499M0QZD8 3231 aa5.53□□□□□ -1.52
NPIPB4-219ENST00000543660 C2orf16Q68DN1 1984 aa5.53□□□□□ -1.52
NPIPB4-219ENST00000543660 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.53□□□□□ -1.52
NPIPB4-219ENST00000543660 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.53□□□□□ -1.52
NPIPB4-219ENST00000543660 SMIM35A0A1B0GVV1 85 aa5.53□□□□□ -1.52
NPIPB4-219ENST00000543660 CFAP99D6REC4 459 aa5.53□□□□□ -1.52
NPIPB4-219ENST00000543660 ANHXE9PGG2 379 aa5.53□□□□□ -1.52
NPIPB4-219ENST00000543660 ZBTB5O15062 677 aa5.53□□□□□ -1.52
NPIPB4-219ENST00000543660 GPR182O15218 404 aa5.53□□□□□ -1.52
NPIPB4-219ENST00000543660 LAMTOR5O43504 91 aa5.53□□□□□ -1.52
NPIPB4-219ENST00000543660 DNAJC6O75061 913 aa5.53□□□□□ -1.52
NPIPB4-219ENST00000543660 FAM13AO94988 1023 aa5.53□□□□□ -1.52
NPIPB4-219ENST00000543660 PARP1P09874 1014 aaKnown RBP5.53□□□□□ -1.52
NPIPB4-219ENST00000543660 CTSAP10619 480 aa5.53□□□□□ -1.52
NPIPB4-219ENST00000543660 PCP11498 1178 aaKnown RBP5.53□□□□□ -1.52
NPIPB4-219ENST00000543660 CA8P35219 290 aa5.53□□□□□ -1.52
NPIPB4-219ENST00000543660 SEC13P55735 322 aa5.53□□□□□ -1.52
NPIPB4-219ENST00000543660 HAND2P61296 217 aa5.53□□□□□ -1.52
NPIPB4-219ENST00000543660 ARID5BQ14865 1188 aa5.53□□□□□ -1.52
NPIPB4-219ENST00000543660 PLCB4Q15147 1175 aa5.53□□□□□ -1.52
NPIPB4-219ENST00000543660 TCEAL1Q15170 157 aa5.53□□□□□ -1.52
NPIPB4-219ENST00000543660 NONOQ15233 471 aaKnown RBP eCLIP5.53□□□□□ -1.52
NPIPB4-219ENST00000543660 PTPN14Q15678 1187 aa5.53□□□□□ -1.52
NPIPB4-219ENST00000543660 SLC35G1Q2M3R5 365 aa5.53□□□□□ -1.52
NPIPB4-219ENST00000543660 CLLU1OSQ5K130 101 aa5.53□□□□□ -1.52
NPIPB4-219ENST00000543660 N4BP2L1Q5TBK1 243 aaPredicted RBP5.53□□□□□ -1.52
NPIPB4-219ENST00000543660 ZNF385CQ66K41 422 aaPredicted RBP5.53□□□□□ -1.52
NPIPB4-219ENST00000543660 MFSD6Q6ZSS7 791 aa5.53□□□□□ -1.52
NPIPB4-219ENST00000543660 FILIP1Q7Z7B0 1213 aa5.53□□□□□ -1.52
NPIPB4-219ENST00000543660 FAM228AQ86W67 206 aa5.53□□□□□ -1.52
NPIPB4-219ENST00000543660 TMEM173Q86WV6 379 aaPredicted RBP5.53□□□□□ -1.52
NPIPB4-219ENST00000543660 TBC1D10CQ8IV04 446 aa5.53□□□□□ -1.52
NPIPB4-219ENST00000543660 TEX2Q8IWB9 1127 aa5.53□□□□□ -1.52
NPIPB4-219ENST00000543660 CKAP2LQ8IYA6 745 aa5.53□□□□□ -1.52
NPIPB4-219ENST00000543660 KIAA0319LQ8IZA0 1049 aa5.53□□□□□ -1.52
NPIPB4-219ENST00000543660 VPS52Q8N1B4 723 aa5.53□□□□□ -1.52
NPIPB4-219ENST00000543660 PLPP7Q8NBV4 271 aa5.53□□□□□ -1.52
NPIPB4-219ENST00000543660 GIMAP8Q8ND71 665 aaPredicted RBP5.53□□□□□ -1.52
NPIPB4-219ENST00000543660 PI4K2BQ8TCG2 481 aa5.53□□□□□ -1.52
NPIPB4-219ENST00000543660 NXPE3Q969Y0 559 aa5.53□□□□□ -1.52
NPIPB4-219ENST00000543660 DMRTB1Q96MA1 342 aa5.53□□□□□ -1.52
NPIPB4-219ENST00000543660 MYADMQ96S97 322 aa5.53□□□□□ -1.52
NPIPB4-219ENST00000543660 DDX23Q9BUQ8 820 aaKnown RBP5.53□□□□□ -1.52
NPIPB4-219ENST00000543660 PIF1Q9H611 641 aa5.53□□□□□ -1.52
NPIPB4-219ENST00000543660 KAT14Q9H8E8 782 aa5.53□□□□□ -1.52
NPIPB4-219ENST00000543660 WDR6Q9NNW5 1121 aaKnown RBP5.53□□□□□ -1.52
NPIPB4-219ENST00000543660 SLC2A4RGQ9NR83 387 aa5.53□□□□□ -1.52
NPIPB4-219ENST00000543660 SPATA6Q9NWH7 488 aaPredicted RBP5.53□□□□□ -1.52
NPIPB4-219ENST00000543660 GINS2Q9Y248 185 aa5.53□□□□□ -1.52
NPIPB4-219ENST00000543660 FAN1Q9Y2M0 1017 aa5.53□□□□□ -1.52
NPIPB4-219ENST00000543660 MTF2Q9Y483 593 aaPredicted RBP5.53□□□□□ -1.52
NPIPB4-219ENST00000543660 BPTFQ12830 3046 aa5.53□□□□□ -1.52
NPIPB4-219ENST00000543660 F5P12259 2224 aa5.52□□□□□ -1.53
NPIPB4-219ENST00000543660 ZMYM6O95789 1325 aa5.52□□□□□ -1.53
NPIPB4-219ENST00000543660 NEDD4P46934 1319 aa5.52□□□□□ -1.53
NPIPB4-219ENST00000543660 BAZ2BQ9UIF8 2168 aaKnown RBP5.52□□□□□ -1.53
NPIPB4-219ENST00000543660 KANSL1LA0AUZ9 987 aa5.52□□□□□ -1.53
NPIPB4-219ENST00000543660 KLRF2D3W0D1 207 aa5.52□□□□□ -1.53
NPIPB4-219ENST00000543660 ITGB5P18084 799 aa5.52□□□□□ -1.53
NPIPB4-219ENST00000543660 GBP2P32456 591 aaPredicted RBP5.52□□□□□ -1.53
NPIPB4-219ENST00000543660 GRM5P41594 1212 aa5.52□□□□□ -1.53
NPIPB4-219ENST00000543660 ALDH7A1P49419 539 aaKnown RBP5.52□□□□□ -1.53
NPIPB4-219ENST00000543660 METAP2P50579 478 aaKnown RBP eCLIP5.52□□□□□ -1.53
NPIPB4-219ENST00000543660 CLCN4P51793 760 aa5.52□□□□□ -1.53
NPIPB4-219ENST00000543660 POLGP54098 1239 aaPredicted RBP5.52□□□□□ -1.53
NPIPB4-219ENST00000543660 BCAR1P56945 870 aa5.52□□□□□ -1.53
NPIPB4-219ENST00000543660 SPEM2Q0P670 501 aa5.52□□□□□ -1.53
NPIPB4-219ENST00000543660 GIT2Q14161 759 aa5.52□□□□□ -1.53
NPIPB4-219ENST00000543660 ODR4Q5SWX8 454 aa5.52□□□□□ -1.53
NPIPB4-219ENST00000543660 PCNX4Q63HM2 1172 aa5.52□□□□□ -1.53
NPIPB4-219ENST00000543660 TSSK4Q6SA08 328 aa5.52□□□□□ -1.53
NPIPB4-219ENST00000543660 MTHFD1LQ6UB35 978 aa5.52□□□□□ -1.53
NPIPB4-219ENST00000543660 DDX53Q86TM3 631 aaKnown RBP5.52□□□□□ -1.53
NPIPB4-219ENST00000543660 NLRX1Q86UT6 975 aa5.52□□□□□ -1.53
NPIPB4-219ENST00000543660 PPFIBP1Q86W92 1011 aa5.52□□□□□ -1.53
NPIPB4-219ENST00000543660 ENAHQ8N8S7 591 aaPredicted RBP5.52□□□□□ -1.53
NPIPB4-219ENST00000543660 CMASQ8NFW8 434 aaPredicted RBP5.52□□□□□ -1.53
NPIPB4-219ENST00000543660 BCL7CQ8WUZ0 217 aaPredicted RBP5.52□□□□□ -1.53
NPIPB4-219ENST00000543660 ESR2Q92731 530 aa5.52□□□□□ -1.53
NPIPB4-219ENST00000543660 SCARF2Q96GP6 870 aaPredicted RBP5.52□□□□□ -1.53
NPIPB4-219ENST00000543660 TMEM169Q96HH4 297 aa5.52□□□□□ -1.53
NPIPB4-219ENST00000543660 KLHL5Q96PQ7 755 aa5.52□□□□□ -1.53
NPIPB4-219ENST00000543660 CITED4Q96RK1 184 aa5.52□□□□□ -1.53
NPIPB4-219ENST00000543660 VN1R3Q9BXE9 311 aa5.52□□□□□ -1.53
NPIPB4-219ENST00000543660 BCO2Q9BYV7 579 aa5.52□□□□□ -1.53
NPIPB4-219ENST00000543660 RHOBTB2Q9BYZ6 727 aa5.52□□□□□ -1.53
NPIPB4-219ENST00000543660 OSBPL6Q9BZF3 934 aa5.52□□□□□ -1.53
NPIPB4-219ENST00000543660 ACBD3Q9H3P7 528 aa5.52□□□□□ -1.53
NPIPB4-219ENST00000543660 PARP2Q9UGN5 583 aa5.52□□□□□ -1.53
NPIPB4-219ENST00000543660 MAD2L2Q9UI95 211 aa5.52□□□□□ -1.53
NPIPB4-219ENST00000543660 GMEB2Q9UKD1 530 aa5.52□□□□□ -1.53
NPIPB4-219ENST00000543660 SDK1Q7Z5N4 2213 aa5.52□□□□□ -1.53
NPIPB4-219ENST00000543660 ITPR1Q14643 2758 aa5.52□□□□□ -1.53
NPIPB4-219ENST00000543660 CLUHO75153 1309 aa5.51□□□□□ -1.53
NPIPB4-219ENST00000543660 TTC41PQ6P2S7 1318 aa5.51□□□□□ -1.53
NPIPB4-219ENST00000543660 COL4A3Q01955 1670 aa5.51□□□□□ -1.53
NPIPB4-219ENST00000543660 AKAP13Q12802 2813 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms