RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 RNASELQ05823 741 aaKnown RBP14.41□□□□□ -0.1
LTBR-208ENST00000541005 SKIV2LQ15477 1246 aaKnown RBP14.41□□□□□ -0.1
LTBR-208ENST00000541005 AXDND1Q5T1B0 1012 aaPredicted RBP14.41□□□□□ -0.1
LTBR-208ENST00000541005 GSTCDQ8NEC7 633 aa14.41□□□□□ -0.1
LTBR-208ENST00000541005 HLA-CQ95604 372 aa14.41□□□□□ -0.1
LTBR-208ENST00000541005 ACO2Q99798 780 aaKnown RBP14.41□□□□□ -0.1
LTBR-208ENST00000541005 USP20Q9Y2K6 914 aa14.41□□□□□ -0.1
LTBR-208ENST00000541005 ABLIM1O14639 778 aa14.4□□□□□ -0.1
LTBR-208ENST00000541005 TBCAO75347 108 aaKnown RBP14.4□□□□□ -0.1
LTBR-208ENST00000541005 DDHD2O94830 711 aa14.4□□□□□ -0.1
LTBR-208ENST00000541005 FAM13AO94988 1023 aa14.4□□□□□ -0.1
LTBR-208ENST00000541005 LIG1P18858 919 aa14.4□□□□□ -0.1
LTBR-208ENST00000541005 ABCD1P33897 745 aa14.4□□□□□ -0.1
LTBR-208ENST00000541005 IRS1P35568 1242 aa14.4□□□□□ -0.1
LTBR-208ENST00000541005 STAT6P42226 847 aa14.4□□□□□ -0.1
LTBR-208ENST00000541005 SLC11A1P49279 550 aa14.4□□□□□ -0.1
LTBR-208ENST00000541005 MRPS5P82675 430 aaKnown RBP14.4□□□□□ -0.1
LTBR-208ENST00000541005 CACNB1Q02641 598 aaPredicted RBP14.4□□□□□ -0.1
LTBR-208ENST00000541005 KRT17Q04695 432 aa14.4□□□□□ -0.1
LTBR-208ENST00000541005 DNM1Q05193 864 aaKnown RBP14.4□□□□□ -0.1
LTBR-208ENST00000541005 GRIK3Q13003 919 aa14.4□□□□□ -0.1
LTBR-208ENST00000541005 DHX8Q14562 1220 aaKnown RBP14.4□□□□□ -0.1
LTBR-208ENST00000541005 TMEM132AQ24JP5 1023 aa14.4□□□□□ -0.1
LTBR-208ENST00000541005 CTC1Q2NKJ3 1217 aa14.4□□□□□ -0.1
LTBR-208ENST00000541005 ZPBP2Q6X784 338 aa14.4□□□□□ -0.1
LTBR-208ENST00000541005 TMEM173Q86WV6 379 aaPredicted RBP14.4□□□□□ -0.1
LTBR-208ENST00000541005 ZNF280BQ86YH2 543 aa14.4□□□□□ -0.1
LTBR-208ENST00000541005 COLGALT2Q8IYK4 626 aa14.4□□□□□ -0.1
LTBR-208ENST00000541005 PPP2R3CQ969Q6 453 aa14.4□□□□□ -0.1
LTBR-208ENST00000541005 PABPC5Q96DU9 382 aaKnown RBP14.4□□□□□ -0.1
LTBR-208ENST00000541005 TMEM169Q96HH4 297 aa14.4□□□□□ -0.1
LTBR-208ENST00000541005 IGSF21Q96ID5 467 aa14.4□□□□□ -0.1
LTBR-208ENST00000541005 ZFP42Q96MM3 310 aa14.4□□□□□ -0.1
LTBR-208ENST00000541005 FIZ1Q96SL8 496 aa14.4□□□□□ -0.1
LTBR-208ENST00000541005 APOL6Q9BWW8 343 aa14.4□□□□□ -0.1
LTBR-208ENST00000541005 UBE2ZQ9H832 354 aaPredicted RBP14.4□□□□□ -0.1
LTBR-208ENST00000541005 DNAJB4Q9UDY4 337 aa14.4□□□□□ -0.1
LTBR-208ENST00000541005 PUF60Q9UHX1 559 aaKnown RBP14.4□□□□□ -0.1
LTBR-208ENST00000541005 FSD2A1L4K1 749 aa14.39□□□□□ -0.11
LTBR-208ENST00000541005 RECQL4O94761 1208 aa14.39□□□□□ -0.11
LTBR-208ENST00000541005 POMCP01189 267 aa14.39□□□□□ -0.11
LTBR-208ENST00000541005 KRT18P05783 430 aaKnown RBP14.39□□□□□ -0.11
LTBR-208ENST00000541005 AKAP5P24588 427 aa14.39□□□□□ -0.11
LTBR-208ENST00000541005 SCNN1GP51170 649 aa14.39□□□□□ -0.11
LTBR-208ENST00000541005 ERVFC1P60507 584 aa14.39□□□□□ -0.11
LTBR-208ENST00000541005 HYAL1Q12794 435 aa14.39□□□□□ -0.11
LTBR-208ENST00000541005 STRN3Q13033 797 aa14.39□□□□□ -0.11
LTBR-208ENST00000541005 E2F4Q16254 413 aa14.39□□□□□ -0.11
LTBR-208ENST00000541005 AAK1Q2M2I8 961 aa14.39□□□□□ -0.11
LTBR-208ENST00000541005 TJAP1Q5JTD0 557 aa14.39□□□□□ -0.11
LTBR-208ENST00000541005 SHC4Q6S5L8 630 aa14.39□□□□□ -0.11
LTBR-208ENST00000541005 MPZL3Q6UWV2 235 aa14.39□□□□□ -0.11
LTBR-208ENST00000541005 SV2BQ7L1I2 683 aa14.39□□□□□ -0.11
LTBR-208ENST00000541005 HAUS6Q7Z4H7 955 aa14.39□□□□□ -0.11
LTBR-208ENST00000541005 DDX53Q86TM3 631 aaKnown RBP14.39□□□□□ -0.11
LTBR-208ENST00000541005 ASB2Q96Q27 587 aa14.39□□□□□ -0.11
LTBR-208ENST00000541005 TARS2Q9BW92 718 aaKnown RBP14.39□□□□□ -0.11
LTBR-208ENST00000541005 CDT1Q9H211 546 aa14.39□□□□□ -0.11
LTBR-208ENST00000541005 CUEDC2Q9H467 287 aa14.39□□□□□ -0.11
LTBR-208ENST00000541005 ST6GALNAC4Q9H4F1 302 aa14.39□□□□□ -0.11
LTBR-208ENST00000541005 MIOSQ9NXC5 875 aa14.39□□□□□ -0.11
LTBR-208ENST00000541005 STK39Q9UEW8 545 aa14.39□□□□□ -0.11
LTBR-208ENST00000541005 RCOR1Q9UKL0 485 aa14.39□□□□□ -0.11
LTBR-208ENST00000541005 PLXNA3P51805 1871 aa14.39□□□□□ -0.11
LTBR-208ENST00000541005 A0A0C4DFX4 3053 aa14.38□□□□□ -0.11
LTBR-208ENST00000541005 FRMD3A2A2Y4 597 aa14.38□□□□□ -0.11
LTBR-208ENST00000541005 MYMKA6NI61 221 aa14.38□□□□□ -0.11
LTBR-208ENST00000541005 TOM1L1O75674 476 aa14.38□□□□□ -0.11
LTBR-208ENST00000541005 PIGRP01833 764 aa14.38□□□□□ -0.11
LTBR-208ENST00000541005 MCF2P10911 925 aa14.38□□□□□ -0.11
LTBR-208ENST00000541005 GRM5P41594 1212 aa14.38□□□□□ -0.11
LTBR-208ENST00000541005 TFF2Q03403 129 aa14.38□□□□□ -0.11
LTBR-208ENST00000541005 FOXD4L6Q3SYB3 417 aaPredicted RBP14.38□□□□□ -0.11
LTBR-208ENST00000541005 ZNF568Q3ZCX4 644 aa14.38□□□□□ -0.11
LTBR-208ENST00000541005 FOXD4L3Q6VB84 417 aaPredicted RBP14.38□□□□□ -0.11
LTBR-208ENST00000541005 MYCT1Q8N699 235 aa14.38□□□□□ -0.11
LTBR-208ENST00000541005 BCL7CQ8WUZ0 217 aaPredicted RBP14.38□□□□□ -0.11
LTBR-208ENST00000541005 DDX12PQ92771 950 aa14.38□□□□□ -0.11
LTBR-208ENST00000541005 DNAJC19Q96DA6 116 aa14.38□□□□□ -0.11
LTBR-208ENST00000541005 FAM193BQ96PV7 902 aaPredicted RBP14.38□□□□□ -0.11
LTBR-208ENST00000541005 RPS6KC1Q96S38 1066 aa14.38□□□□□ -0.11
LTBR-208ENST00000541005 CDCA3Q99618 268 aaPredicted RBP14.38□□□□□ -0.11
LTBR-208ENST00000541005 TCF25Q9BQ70 676 aa14.38□□□□□ -0.11
LTBR-208ENST00000541005 GBP3Q9H0R5 595 aa14.38□□□□□ -0.11
LTBR-208ENST00000541005 TNMDQ9H2S6 317 aa14.38□□□□□ -0.11
LTBR-208ENST00000541005 NGRNQ9NPE2 291 aaKnown RBP14.38□□□□□ -0.11
LTBR-208ENST00000541005 MARCH5Q9NX47 278 aa14.38□□□□□ -0.11
LTBR-208ENST00000541005 SNTG2Q9NY99 539 aa14.38□□□□□ -0.11
LTBR-208ENST00000541005 SEL1LQ9UBV2 794 aa14.38□□□□□ -0.11
LTBR-208ENST00000541005 PARP2Q9UGN5 583 aa14.38□□□□□ -0.11
LTBR-208ENST00000541005 PCDHA7Q9UN72 937 aa14.38□□□□□ -0.11
LTBR-208ENST00000541005 PCDHGC5Q9Y5F6 944 aa14.38□□□□□ -0.11
LTBR-208ENST00000541005 ATP6V1DQ9Y5K8 247 aa14.38□□□□□ -0.11
LTBR-208ENST00000541005 NT5C1B-RDH14C9J2C7 533 aa14.37□□□□□ -0.11
LTBR-208ENST00000541005 K7ENM7 598 aa14.37□□□□□ -0.11
LTBR-208ENST00000541005 PTGESO14684 152 aa14.37□□□□□ -0.11
LTBR-208ENST00000541005 TRAK2O60296 914 aa14.37□□□□□ -0.11
LTBR-208ENST00000541005 EFEMP2O95967 443 aa14.37□□□□□ -0.11
LTBR-208ENST00000541005 ALDH2P05091 517 aa14.37□□□□□ -0.11
LTBR-208ENST00000541005 GAP43P17677 238 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms