RNA–Protein interactions for RNA: ENST00000540935.5

DDX11-217, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 2

Gene DDX11, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-217ENST00000540935 VN1R3Q9BXE9 311 aa16.35■□□□□ 0.21
DDX11-217ENST00000540935 MRPL17Q9NRX2 175 aaKnown RBP16.35■□□□□ 0.21
DDX11-217ENST00000540935 SMC3Q9UQE7 1217 aa16.35■□□□□ 0.21
DDX11-217ENST00000540935 CD2BP2O95400 341 aaKnown RBP16.34■□□□□ 0.21
DDX11-217ENST00000540935 PRKCBP05771 671 aa16.34■□□□□ 0.21
DDX11-217ENST00000540935 URODP06132 367 aa16.34■□□□□ 0.21
DDX11-217ENST00000540935 AKAP5P24588 427 aa16.34■□□□□ 0.21
DDX11-217ENST00000540935 ATP2C1P98194 919 aaPredicted RBP16.34■□□□□ 0.21
DDX11-217ENST00000540935 APBB1IPQ7Z5R6 666 aaPredicted RBP16.34■□□□□ 0.21
DDX11-217ENST00000540935 CDR2LQ86X02 465 aaPredicted RBP16.34■□□□□ 0.21
DDX11-217ENST00000540935 BSNDQ8WZ55 320 aa16.34■□□□□ 0.21
DDX11-217ENST00000540935 RPGRIP1Q96KN7 1286 aa16.34■□□□□ 0.21
DDX11-217ENST00000540935 RIPOR3Q96MK2 946 aa16.34■□□□□ 0.21
DDX11-217ENST00000540935 COLEC11Q9BWP8 271 aa16.34■□□□□ 0.21
DDX11-217ENST00000540935 CCDC113Q9H0I3 377 aa16.34■□□□□ 0.21
DDX11-217ENST00000540935 PARP2Q9UGN5 583 aa16.34■□□□□ 0.21
DDX11-217ENST00000540935 MUTYHQ9UIF7 546 aa16.34■□□□□ 0.21
DDX11-217ENST00000540935 PRG3Q9Y2Y8 225 aaPredicted RBP16.34■□□□□ 0.21
DDX11-217ENST00000540935 NR2E1Q9Y466 385 aa16.34■□□□□ 0.21
DDX11-217ENST00000540935 PHLPP2Q6ZVD8 1323 aa16.34■□□□□ 0.21
DDX11-217ENST00000540935 KLRC2P26717 231 aa16.33■□□□□ 0.2
DDX11-217ENST00000540935 MTHFRP42898 656 aa16.33■□□□□ 0.2
DDX11-217ENST00000540935 ARL6IP4Q66PJ3 421 aaKnown RBP16.33■□□□□ 0.2
DDX11-217ENST00000540935 CABP7Q86V35 215 aa16.33■□□□□ 0.2
DDX11-217ENST00000540935 GSTCDQ8NEC7 633 aa16.33■□□□□ 0.2
DDX11-217ENST00000540935 SLC22A17Q8WUG5 538 aa16.33■□□□□ 0.2
DDX11-217ENST00000540935 KLHL5Q96PQ7 755 aa16.33■□□□□ 0.2
DDX11-217ENST00000540935 HERC2P3Q9BVR0 1158 aa16.33■□□□□ 0.2
DDX11-217ENST00000540935 TIPINQ9BVW5 301 aa16.33■□□□□ 0.2
DDX11-217ENST00000540935 APOL5Q9BWW9 433 aa16.33■□□□□ 0.2
DDX11-217ENST00000540935 PDZD7Q9H5P4 517 aa16.33■□□□□ 0.2
DDX11-217ENST00000540935 MARCH5Q9NX47 278 aa16.33■□□□□ 0.2
DDX11-217ENST00000540935 MIOSQ9NXC5 875 aa16.33■□□□□ 0.2
DDX11-217ENST00000540935 DPP7Q9UHL4 492 aa16.33■□□□□ 0.2
DDX11-217ENST00000540935 LILRB3O75022 631 aa16.32■□□□□ 0.2
DDX11-217ENST00000540935 EFEMP2O95967 443 aa16.32■□□□□ 0.2
DDX11-217ENST00000540935 SSBP05455 408 aaKnown RBP eCLIP16.32■□□□□ 0.2
DDX11-217ENST00000540935 GLUD2P49448 558 aa16.32■□□□□ 0.2
DDX11-217ENST00000540935 IL17AQ16552 155 aa16.32■□□□□ 0.2
DDX11-217ENST00000540935 DCAF4L1Q3SXM0 396 aa16.32■□□□□ 0.2
DDX11-217ENST00000540935 ATAT1Q5SQI0 421 aa16.32■□□□□ 0.2
DDX11-217ENST00000540935 LARP1BQ659C4 914 aaKnown RBP16.32■□□□□ 0.2
DDX11-217ENST00000540935 ELMSAN1Q6PJG2 1045 aa16.32■□□□□ 0.2
DDX11-217ENST00000540935 GPR65Q8IYL9 337 aa16.32■□□□□ 0.2
DDX11-217ENST00000540935 RNF168Q8IYW5 571 aaPredicted RBP16.32■□□□□ 0.2
DDX11-217ENST00000540935 EDAQ92838 391 aa16.32■□□□□ 0.2
DDX11-217ENST00000540935 DRC1Q96MC2 740 aa16.32■□□□□ 0.2
DDX11-217ENST00000540935 NT5C3AQ9H0P0 336 aa16.32■□□□□ 0.2
DDX11-217ENST00000540935 SFXN1Q9H9B4 322 aa16.32■□□□□ 0.2
DDX11-217ENST00000540935 C17orf75Q9HAS0 396 aa16.32■□□□□ 0.2
DDX11-217ENST00000540935 KCNG1Q9UIX4 513 aa16.32■□□□□ 0.2
DDX11-217ENST00000540935 E9PMD0 336 aa16.31■□□□□ 0.2
DDX11-217ENST00000540935 K7ERI5 159 aa16.31■□□□□ 0.2
DDX11-217ENST00000540935 ADH1AP07327 375 aa16.31■□□□□ 0.2
DDX11-217ENST00000540935 CNPP09543 421 aaKnown RBP16.31■□□□□ 0.2
DDX11-217ENST00000540935 EPCAMP16422 314 aa16.31■□□□□ 0.2
DDX11-217ENST00000540935 LIG1P18858 919 aa16.31■□□□□ 0.2
DDX11-217ENST00000540935 CLCN4P51793 760 aa16.31■□□□□ 0.2
DDX11-217ENST00000540935 DMP1Q13316 513 aaPredicted RBP16.31■□□□□ 0.2
DDX11-217ENST00000540935 TUSC3Q13454 348 aa16.31■□□□□ 0.2
DDX11-217ENST00000540935 HYIQ5T013 277 aa16.31■□□□□ 0.2
DDX11-217ENST00000540935 KIAA1841Q6NSI8 718 aa16.31■□□□□ 0.2
DDX11-217ENST00000540935 FBXL18Q96ME1 805 aa16.31■□□□□ 0.2
DDX11-217ENST00000540935 MMTAG2Q9BU76 263 aaKnown RBP16.31■□□□□ 0.2
DDX11-217ENST00000540935 KLK14Q9P0G3 267 aa16.31■□□□□ 0.2
DDX11-217ENST00000540935 RAPGEFL1Q9UHV5 662 aa16.31■□□□□ 0.2
DDX11-217ENST00000540935 ADAM28Q9UKQ2 775 aa16.31■□□□□ 0.2
DDX11-217ENST00000540935 RBM19Q9Y4C8 960 aaKnown RBP16.31■□□□□ 0.2
DDX11-217ENST00000540935 C5orf42Q9H799 3197 aa16.3■□□□□ 0.2
DDX11-217ENST00000540935 SPDYE4A6NLX3 237 aa16.3■□□□□ 0.2
DDX11-217ENST00000540935 TTLL13PA6NNM8 815 aa16.3■□□□□ 0.2
DDX11-217ENST00000540935 CCDC169A6NNP5 214 aa16.3■□□□□ 0.2
DDX11-217ENST00000540935 PP2D1A8MPX8 630 aa16.3■□□□□ 0.2
DDX11-217ENST00000540935 SLC26A4O43511 780 aa16.3■□□□□ 0.2
DDX11-217ENST00000540935 BMP15O95972 392 aa16.3■□□□□ 0.2
DDX11-217ENST00000540935 C1RP00736 705 aa16.3■□□□□ 0.2
DDX11-217ENST00000540935 THP07101 528 aa16.3■□□□□ 0.2
DDX11-217ENST00000540935 CDC25AP30304 524 aa16.3■□□□□ 0.2
DDX11-217ENST00000540935 DSG1Q02413 1049 aa16.3■□□□□ 0.2
DDX11-217ENST00000540935 CREMQ03060 361 aa16.3■□□□□ 0.2
DDX11-217ENST00000540935 USP41Q3LFD5 358 aa16.3■□□□□ 0.2
DDX11-217ENST00000540935 RARS2Q5T160 578 aaKnown RBP16.3■□□□□ 0.2
DDX11-217ENST00000540935 ATF7IP2Q5U623 682 aa16.3■□□□□ 0.2
DDX11-217ENST00000540935 KIAA0319Q5VV43 1072 aa16.3■□□□□ 0.2
DDX11-217ENST00000540935 RINT1Q6NUQ1 792 aa16.3■□□□□ 0.2
DDX11-217ENST00000540935 CDK5RAP3Q96JB5 506 aa16.3■□□□□ 0.2
DDX11-217ENST00000540935 AK8Q96MA6 479 aa16.3■□□□□ 0.2
DDX11-217ENST00000540935 KIFC3Q9BVG8 833 aa16.3■□□□□ 0.2
DDX11-217ENST00000540935 POMKQ9H5K3 350 aa16.3■□□□□ 0.2
DDX11-217ENST00000540935 TMEM134Q9H6X4 195 aa16.3■□□□□ 0.2
DDX11-217ENST00000540935 RXFP1Q9HBX9 757 aa16.3■□□□□ 0.2
DDX11-217ENST00000540935 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.3■□□□□ 0.2
DDX11-217ENST00000540935 CHST7Q9NS84 486 aa16.3■□□□□ 0.2
DDX11-217ENST00000540935 SNTG2Q9NY99 539 aa16.3■□□□□ 0.2
DDX11-217ENST00000540935 KCND2Q9NZV8 630 aa16.3■□□□□ 0.2
DDX11-217ENST00000540935 SF3B1O75533 1304 aaKnown RBP eCLIP16.29■□□□□ 0.25e-8■■■■■ 71.1
DDX11-217ENST00000540935 VWA3AA6NCI4 1184 aa16.29■□□□□ 0.2
DDX11-217ENST00000540935 C2CD2LO14523 706 aa16.29■□□□□ 0.2
DDX11-217ENST00000540935 HIP1RO75146 1068 aa16.29■□□□□ 0.2
DDX11-217ENST00000540935 TADA2AO75478 443 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms