RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 MCCD1P59942 119 aaPredicted RBP12.81□□□□□ -0.36
VTN-202ENST00000539746 YWHAEP62258 255 aaKnown RBP12.81□□□□□ -0.36
VTN-202ENST00000539746 KCNH2Q12809 1159 aa12.81□□□□□ -0.36
VTN-202ENST00000539746 PSMD6Q15008 389 aa12.81□□□□□ -0.36
VTN-202ENST00000539746 WDR44Q5JSH3 913 aa12.81□□□□□ -0.36
VTN-202ENST00000539746 MARCH8Q5T0T0 291 aa12.81□□□□□ -0.36
VTN-202ENST00000539746 KRT39Q6A163 491 aa12.81□□□□□ -0.36
VTN-202ENST00000539746 TMC6Q7Z403 805 aa12.81□□□□□ -0.36
VTN-202ENST00000539746 TRAPPC12Q8WVT3 735 aa12.81□□□□□ -0.36
VTN-202ENST00000539746 TAF4BQ92750 862 aa12.81□□□□□ -0.36
VTN-202ENST00000539746 JAKMIP2Q96AA8 810 aa12.81□□□□□ -0.36
VTN-202ENST00000539746 PANX2Q96RD6 677 aa12.81□□□□□ -0.36
VTN-202ENST00000539746 FDXACB1Q9BRP7 624 aaPredicted RBP12.81□□□□□ -0.36
VTN-202ENST00000539746 FTHL17Q9BXU8 183 aa12.81□□□□□ -0.36
VTN-202ENST00000539746 RPF1Q9H9Y2 349 aaKnown RBP12.81□□□□□ -0.36
VTN-202ENST00000539746 PLCB1Q9NQ66 1216 aa12.81□□□□□ -0.36
VTN-202ENST00000539746 PRDM10Q9NQV6 1147 aa12.81□□□□□ -0.36
VTN-202ENST00000539746 RBAKQ9NYW8 714 aaPredicted RBP12.81□□□□□ -0.36
VTN-202ENST00000539746 A0A1W2PQ45 241 aaPredicted RBP12.8□□□□□ -0.36
VTN-202ENST00000539746 A0A1W2PQY0 241 aa12.8□□□□□ -0.36
VTN-202ENST00000539746 PITPNM1O00562 1244 aa12.8□□□□□ -0.36
VTN-202ENST00000539746 CLIC2O15247 247 aa12.8□□□□□ -0.36
VTN-202ENST00000539746 TNNC2P02585 160 aa12.8□□□□□ -0.36
VTN-202ENST00000539746 MSNP26038 577 aaKnown RBP12.8□□□□□ -0.36
VTN-202ENST00000539746 MXI1P50539 228 aa12.8□□□□□ -0.36
VTN-202ENST00000539746 MYL7Q01449 175 aa12.8□□□□□ -0.36
VTN-202ENST00000539746 C1orf53Q5VUE5 145 aa12.8□□□□□ -0.36
VTN-202ENST00000539746 LHX8Q68G74 356 aa12.8□□□□□ -0.36
VTN-202ENST00000539746 WDR49Q8IV35 697 aa12.8□□□□□ -0.36
VTN-202ENST00000539746 DNAJC5GQ8N7S2 189 aa12.8□□□□□ -0.36
VTN-202ENST00000539746 APBB2Q92870 758 aa12.8□□□□□ -0.36
VTN-202ENST00000539746 PGBD4Q96DM1 585 aa12.8□□□□□ -0.36
VTN-202ENST00000539746 ANKRD36BP1Q96IX9 119 aa12.8□□□□□ -0.36
VTN-202ENST00000539746 MFSD14AQ96MC6 490 aa12.8□□□□□ -0.36
VTN-202ENST00000539746 TOX2Q96NM4 488 aa12.8□□□□□ -0.36
VTN-202ENST00000539746 FAM213AQ9BRX8 229 aa12.8□□□□□ -0.36
VTN-202ENST00000539746 HSD3B7Q9H2F3 369 aa12.8□□□□□ -0.36
VTN-202ENST00000539746 IFT122Q9HBG6 1241 aa12.8□□□□□ -0.36
VTN-202ENST00000539746 TMEM8AQ9HCN3 771 aa12.8□□□□□ -0.36
VTN-202ENST00000539746 MYH11P35749 1972 aa12.8□□□□□ -0.36
VTN-202ENST00000539746 A0A1B0GUA9 196 aa12.79□□□□□ -0.36
VTN-202ENST00000539746 ARHGEF37A1IGU5 675 aa12.79□□□□□ -0.36
VTN-202ENST00000539746 GOLGA6L9A6NEM1 432 aa12.79□□□□□ -0.36
VTN-202ENST00000539746 TREHO43280 583 aa12.79□□□□□ -0.36
VTN-202ENST00000539746 RPS6KA5O75582 802 aa12.79□□□□□ -0.36
VTN-202ENST00000539746 SGPL1O95470 568 aa12.79□□□□□ -0.36
VTN-202ENST00000539746 VTNP04004 478 aa12.79□□□□□ -0.36
VTN-202ENST00000539746 HSPA8P11142 646 aaKnown RBP12.79□□□□□ -0.36
VTN-202ENST00000539746 ATF7P17544 494 aaPredicted RBP12.79□□□□□ -0.36
VTN-202ENST00000539746 TNNI1P19237 187 aa12.79□□□□□ -0.36
VTN-202ENST00000539746 HOXD13P35453 343 aa12.79□□□□□ -0.36
VTN-202ENST00000539746 ZBED6P86452 979 aa12.79□□□□□ -0.36
VTN-202ENST00000539746 CYP24A1Q07973 514 aa12.79□□□□□ -0.36
VTN-202ENST00000539746 RBL2Q08999 1139 aa12.79□□□□□ -0.36
VTN-202ENST00000539746 PAK2Q13177 524 aa12.79□□□□□ -0.36
VTN-202ENST00000539746 MKRN4PQ13434 485 aaPredicted RBP12.79□□□□□ -0.36
VTN-202ENST00000539746 DUOXA2Q1HG44 320 aa12.79□□□□□ -0.36
VTN-202ENST00000539746 TMEM63BQ5T3F8 832 aa12.79□□□□□ -0.36
VTN-202ENST00000539746 PPP1R2P3Q6NXS1 205 aa12.79□□□□□ -0.36
VTN-202ENST00000539746 IRF2BP1Q8IU81 584 aa12.79□□□□□ -0.36
VTN-202ENST00000539746 BRSK2Q8IWQ3 736 aa12.79□□□□□ -0.36
VTN-202ENST00000539746 SLC43A3Q8NBI5 491 aa12.79□□□□□ -0.36
VTN-202ENST00000539746 DNAJB3Q8WWF6 145 aa12.79□□□□□ -0.36
VTN-202ENST00000539746 SYN2Q92777 582 aaPredicted RBP12.79□□□□□ -0.36
VTN-202ENST00000539746 ACAP3Q96P50 834 aa12.79□□□□□ -0.36
VTN-202ENST00000539746 DEFB118Q96PH6 123 aa12.79□□□□□ -0.36
VTN-202ENST00000539746 KIFC3Q9BVG8 833 aa12.79□□□□□ -0.36
VTN-202ENST00000539746 TARS2Q9BW92 718 aaKnown RBP12.79□□□□□ -0.36
VTN-202ENST00000539746 ADAMTS10Q9H324 1103 aa12.79□□□□□ -0.36
VTN-202ENST00000539746 AGPAT5Q9NUQ2 364 aa12.79□□□□□ -0.36
VTN-202ENST00000539746 CEP72Q9P209 647 aa12.79□□□□□ -0.36
VTN-202ENST00000539746 TELO2Q9Y4R8 837 aa12.79□□□□□ -0.36
VTN-202ENST00000539746 PHACTR2O75167 634 aa12.78□□□□□ -0.36
VTN-202ENST00000539746 GPR32O75388 356 aa12.78□□□□□ -0.36
VTN-202ENST00000539746 TUBB4AP04350 444 aa12.78□□□□□ -0.36
VTN-202ENST00000539746 TMEM191BP0C7N4 346 aa12.78□□□□□ -0.36
VTN-202ENST00000539746 COL6A1P12109 1028 aa12.78□□□□□ -0.36
VTN-202ENST00000539746 PROZP22891 400 aa12.78□□□□□ -0.36
VTN-202ENST00000539746 TBXAS1P24557 533 aaPredicted RBP12.78□□□□□ -0.36
VTN-202ENST00000539746 RFC2P35250 354 aa12.78□□□□□ -0.36
VTN-202ENST00000539746 THPOP40225 353 aa12.78□□□□□ -0.36
VTN-202ENST00000539746 GRM5P41594 1212 aa12.78□□□□□ -0.36
VTN-202ENST00000539746 KCNJ6P48051 423 aa12.78□□□□□ -0.36
VTN-202ENST00000539746 FMO5P49326 533 aa12.78□□□□□ -0.36
VTN-202ENST00000539746 TRIM32Q13049 653 aa12.78□□□□□ -0.36
VTN-202ENST00000539746 SNX17Q15036 470 aa12.78□□□□□ -0.36
VTN-202ENST00000539746 KIZQ2M2Z5 673 aa12.78□□□□□ -0.36
VTN-202ENST00000539746 HSP90AA4PQ58FG1 418 aa12.78□□□□□ -0.36
VTN-202ENST00000539746 FAM26DQ5JW98 314 aa12.78□□□□□ -0.36
VTN-202ENST00000539746 GLIS3Q8NEA6 775 aa12.78□□□□□ -0.36
VTN-202ENST00000539746 FBXL13Q8NEE6 735 aa12.78□□□□□ -0.36
VTN-202ENST00000539746 OR8K1Q8NGG5 319 aa12.78□□□□□ -0.36
VTN-202ENST00000539746 SH3TC2Q8TF17 1288 aa12.78□□□□□ -0.36
VTN-202ENST00000539746 DHX38Q92620 1227 aaKnown RBP12.78□□□□□ -0.36
VTN-202ENST00000539746 SLC35C1Q96A29 364 aa12.78□□□□□ -0.36
VTN-202ENST00000539746 LENG1Q96BZ8 264 aaPredicted RBP12.78□□□□□ -0.36
VTN-202ENST00000539746 ZNF333Q96JL9 665 aa12.78□□□□□ -0.36
VTN-202ENST00000539746 SPAG5Q96R06 1193 aa12.78□□□□□ -0.36
VTN-202ENST00000539746 MED15Q96RN5 788 aa12.78□□□□□ -0.36
VTN-202ENST00000539746 CBWD1Q9BRT8 395 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms