RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 CYP26A1O43174 497 aa15.29■□□□□ 0.04
ACTN1-205ENST00000538545 TACC1O75410 805 aa15.29■□□□□ 0.04
ACTN1-205ENST00000538545 IQCF3P0C7M6 154 aa15.29■□□□□ 0.04
ACTN1-205ENST00000538545 NOP2P46087 812 aaKnown RBP15.29■□□□□ 0.04
ACTN1-205ENST00000538545 ZNF157P51786 506 aaPredicted RBP15.29■□□□□ 0.04
ACTN1-205ENST00000538545 CLCN6P51797 869 aa15.29■□□□□ 0.04
ACTN1-205ENST00000538545 EFCAB12Q6NXP0 572 aa15.29■□□□□ 0.04
ACTN1-205ENST00000538545 SLC47A2Q86VL8 602 aa15.29■□□□□ 0.04
ACTN1-205ENST00000538545 FBXL18Q96ME1 805 aa15.29■□□□□ 0.04
ACTN1-205ENST00000538545 MSTO1Q9BUK6 570 aa15.29■□□□□ 0.04
ACTN1-205ENST00000538545 OSGEPQ9NPF4 335 aa15.29■□□□□ 0.04
ACTN1-205ENST00000538545 ZNF446Q9NWS9 450 aa15.29■□□□□ 0.04
ACTN1-205ENST00000538545 ASB14A6NK59 587 aa15.29■□□□□ 0.04
ACTN1-205ENST00000538545 PJA2O43164 708 aa15.29■□□□□ 0.04
ACTN1-205ENST00000538545 ITGBL1O95965 494 aaPredicted RBP15.29■□□□□ 0.04
ACTN1-205ENST00000538545 PRKCIP41743 596 aa15.29■□□□□ 0.04
ACTN1-205ENST00000538545 RTP1P59025 263 aa15.29■□□□□ 0.04
ACTN1-205ENST00000538545 HSP90AA2PQ14568 343 aaPredicted RBP15.29■□□□□ 0.04
ACTN1-205ENST00000538545 KRT39Q6A163 491 aa15.29■□□□□ 0.04
ACTN1-205ENST00000538545 ZNF662Q6ZS27 426 aa15.29■□□□□ 0.04
ACTN1-205ENST00000538545 BBXQ8WY36 941 aaPredicted RBP15.29■□□□□ 0.04
ACTN1-205ENST00000538545 MFSD14AQ96MC6 490 aa15.29■□□□□ 0.04
ACTN1-205ENST00000538545 ZIC5Q96T25 663 aa15.29■□□□□ 0.04
ACTN1-205ENST00000538545 MPHOSPH6Q99547 160 aaKnown RBP15.29■□□□□ 0.04
ACTN1-205ENST00000538545 TSGA10Q9BZW7 698 aa15.29■□□□□ 0.04
ACTN1-205ENST00000538545 FBXL5Q9UKA1 691 aa15.29■□□□□ 0.04
ACTN1-205ENST00000538545 ZNF233A6NK53 670 aa15.28■□□□□ 0.04
ACTN1-205ENST00000538545 ADCY3O60266 1144 aa15.28■□□□□ 0.04
ACTN1-205ENST00000538545 LGALS2P05162 132 aa15.28■□□□□ 0.04
ACTN1-205ENST00000538545 INSRRP14616 1297 aa15.28■□□□□ 0.04
ACTN1-205ENST00000538545 PAPD7Q5XG87 772 aaKnown RBP15.28■□□□□ 0.04
ACTN1-205ENST00000538545 ANKRD23Q86SG2 305 aa15.28■□□□□ 0.04
ACTN1-205ENST00000538545 SHCBP1Q8NEM2 672 aa15.28■□□□□ 0.04
ACTN1-205ENST00000538545 TRIM58Q8NG06 486 aa15.28■□□□□ 0.04
ACTN1-205ENST00000538545 OR5B17Q8NGF7 314 aa15.28■□□□□ 0.04
ACTN1-205ENST00000538545 MAML3Q96JK9 1138 aa15.28■□□□□ 0.04
ACTN1-205ENST00000538545 PNKPQ96T60 521 aa15.28■□□□□ 0.04
ACTN1-205ENST00000538545 TLR10Q9BXR5 811 aa15.28■□□□□ 0.04
ACTN1-205ENST00000538545 KATNBL1Q9H079 304 aa15.28■□□□□ 0.04
ACTN1-205ENST00000538545 SUCLA2Q9P2R7 463 aaPredicted RBP15.28■□□□□ 0.04
ACTN1-205ENST00000538545 INO80B-WBP1J3KQ70 363 aa15.28■□□□□ 0.04
ACTN1-205ENST00000538545 LGR5O75473 907 aa15.28■□□□□ 0.04
ACTN1-205ENST00000538545 ZMYND10O75800 440 aa15.28■□□□□ 0.04
ACTN1-205ENST00000538545 VTNP04004 478 aa15.28■□□□□ 0.04
ACTN1-205ENST00000538545 SMPD1P17405 629 aa15.28■□□□□ 0.04
ACTN1-205ENST00000538545 C2orf54Q08AI8 447 aa15.28■□□□□ 0.04
ACTN1-205ENST00000538545 CCL14Q16627 93 aa15.28■□□□□ 0.04
ACTN1-205ENST00000538545 PARD6BQ9BYG5 372 aa15.28■□□□□ 0.04
ACTN1-205ENST00000538545 INO80BQ9C086 356 aaPredicted RBP15.28■□□□□ 0.04
ACTN1-205ENST00000538545 ATMINO43313 823 aaPredicted RBP15.27■□□□□ 0.04
ACTN1-205ENST00000538545 FERP16591 822 aa15.27■□□□□ 0.04
ACTN1-205ENST00000538545 GALCP54803 685 aa15.27■□□□□ 0.04
ACTN1-205ENST00000538545 BIRC3Q13489 604 aa15.27■□□□□ 0.04
ACTN1-205ENST00000538545 NAB2Q15742 525 aa15.27■□□□□ 0.04
ACTN1-205ENST00000538545 TDRD10Q5VZ19 366 aaKnown RBP15.27■□□□□ 0.04
ACTN1-205ENST00000538545 TMEM192Q8IY95 271 aa15.27■□□□□ 0.04
ACTN1-205ENST00000538545 SLC17A8Q8NDX2 589 aa15.27■□□□□ 0.04
ACTN1-205ENST00000538545 MORC4Q8TE76 937 aa15.27■□□□□ 0.04
ACTN1-205ENST00000538545 PSPC1Q8WXF1 523 aaKnown RBP15.27■□□□□ 0.04
ACTN1-205ENST00000538545 GOLGA1Q92805 767 aa15.27■□□□□ 0.04
ACTN1-205ENST00000538545 HVCN1Q96D96 273 aa15.27■□□□□ 0.04
ACTN1-205ENST00000538545 NOX5Q96PH1 765 aa15.27■□□□□ 0.04
ACTN1-205ENST00000538545 RAB20Q9NX57 234 aa15.27■□□□□ 0.04
ACTN1-205ENST00000538545 RBAKQ9NYW8 714 aaPredicted RBP15.27■□□□□ 0.04
ACTN1-205ENST00000538545 FLRT1Q9NZU1 646 aa15.27■□□□□ 0.04
ACTN1-205ENST00000538545 CGNQ9P2M7 1197 aaKnown RBP15.27■□□□□ 0.04
ACTN1-205ENST00000538545 MKI67P46013 3256 aaKnown RBP15.27■□□□□ 0.04
ACTN1-205ENST00000538545 KAT6AQ92794 2004 aa15.27■□□□□ 0.04
ACTN1-205ENST00000538545 GRID2IPA4D2P6 1211 aa15.27■□□□□ 0.03
ACTN1-205ENST00000538545 MGAMO43451 1857 aa15.27■□□□□ 0.03
ACTN1-205ENST00000538545 MSCO60682 206 aa15.27■□□□□ 0.03
ACTN1-205ENST00000538545 COPB2P35606 906 aa15.27■□□□□ 0.03
ACTN1-205ENST00000538545 TMEM62Q0P6H9 643 aa15.27■□□□□ 0.03
ACTN1-205ENST00000538545 CETN1Q12798 172 aa15.27■□□□□ 0.03
ACTN1-205ENST00000538545 PRPF4BQ13523 1007 aaKnown RBP15.27■□□□□ 0.03
ACTN1-205ENST00000538545 THNSL1Q8IYQ7 743 aa15.27■□□□□ 0.03
ACTN1-205ENST00000538545 HELQQ8TDG4 1101 aa15.27■□□□□ 0.03
ACTN1-205ENST00000538545 ARHGEF26Q96DR7 871 aa15.27■□□□□ 0.03
ACTN1-205ENST00000538545 MAF1Q9H063 256 aa15.27■□□□□ 0.03
ACTN1-205ENST00000538545 ANKZF1Q9H8Y5 726 aa15.27■□□□□ 0.03
ACTN1-205ENST00000538545 TMEM8AQ9HCN3 771 aa15.27■□□□□ 0.03
ACTN1-205ENST00000538545 GINS2Q9Y248 185 aa15.27■□□□□ 0.03
ACTN1-205ENST00000538545 UMODL1Q5DID0 1318 aa15.27■□□□□ 0.03
ACTN1-205ENST00000538545 CTAGE15A4D2H0 777 aa15.26■□□□□ 0.03
ACTN1-205ENST00000538545 CTAGE8P0CG41 777 aa15.26■□□□□ 0.03
ACTN1-205ENST00000538545 GARTP22102 1010 aa15.26■□□□□ 0.03
ACTN1-205ENST00000538545 RFC5P40937 340 aa15.26■□□□□ 0.03
ACTN1-205ENST00000538545 C2CD6Q53TS8 623 aa15.26■□□□□ 0.03
ACTN1-205ENST00000538545 EEF1DP3Q658K8 133 aa15.26■□□□□ 0.03
ACTN1-205ENST00000538545 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.26■□□□□ 0.03
ACTN1-205ENST00000538545 PHLDB2Q86SQ0 1253 aa15.26■□□□□ 0.03
ACTN1-205ENST00000538545 NOP9Q86U38 636 aaKnown RBP15.26■□□□□ 0.03
ACTN1-205ENST00000538545 CTAGE6Q86UF2 777 aa15.26■□□□□ 0.03
ACTN1-205ENST00000538545 CTAGE4Q8IX94 777 aa15.26■□□□□ 0.03
ACTN1-205ENST00000538545 FBXL13Q8NEE6 735 aa15.26■□□□□ 0.03
ACTN1-205ENST00000538545 CAGE1Q8TC20 777 aa15.26■□□□□ 0.03
ACTN1-205ENST00000538545 FNBP1Q96RU3 617 aa15.26■□□□□ 0.03
ACTN1-205ENST00000538545 SNX12Q9UMY4 172 aa15.26■□□□□ 0.03
ACTN1-205ENST00000538545 EXTL3O43909 919 aa15.26■□□□□ 0.03
ACTN1-205ENST00000538545 FGFR4P22455 802 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms