RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 R3HDM1Q15032 1099 aaKnown RBP7.15□□□□□ -1.26
USP28-206ENST00000538224 MTERF2Q49AM1 385 aa7.15□□□□□ -1.26
USP28-206ENST00000538224 WDR44Q5JSH3 913 aa7.15□□□□□ -1.26
USP28-206ENST00000538224 C1orf220Q5T0J3 134 aa7.15□□□□□ -1.26
USP28-206ENST00000538224 TRIM72Q6ZMU5 477 aa7.15□□□□□ -1.26
USP28-206ENST00000538224 SND1Q7KZF4 910 aaKnown RBP eCLIP7.15□□□□□ -1.26
USP28-206ENST00000538224 ERO1BQ86YB8 467 aa7.15□□□□□ -1.26
USP28-206ENST00000538224 ARHGEF19Q8IW93 802 aa7.15□□□□□ -1.26
USP28-206ENST00000538224 CCDC60Q8IWA6 550 aaPredicted RBP7.15□□□□□ -1.26
USP28-206ENST00000538224 PPM1KQ8N3J5 372 aa7.15□□□□□ -1.26
USP28-206ENST00000538224 DEPTORQ8TB45 409 aa7.15□□□□□ -1.26
USP28-206ENST00000538224 SLC35G2Q8TBE7 412 aa7.15□□□□□ -1.26
USP28-206ENST00000538224 EPS8L1Q8TE68 723 aa7.15□□□□□ -1.26
USP28-206ENST00000538224 AFAP1L1Q8TED9 768 aa7.15□□□□□ -1.26
USP28-206ENST00000538224 SCFD2Q8WU76 684 aa7.15□□□□□ -1.26
USP28-206ENST00000538224 GTF3C2Q8WUA4 911 aaPredicted RBP7.15□□□□□ -1.26
USP28-206ENST00000538224 LRRC45Q96CN5 670 aa7.15□□□□□ -1.26
USP28-206ENST00000538224 FNBP1Q96RU3 617 aa7.15□□□□□ -1.26
USP28-206ENST00000538224 RPS6KC1Q96S38 1066 aa7.15□□□□□ -1.26
USP28-206ENST00000538224 KRT12Q99456 494 aa7.15□□□□□ -1.26
USP28-206ENST00000538224 NIFKQ9BYG3 293 aaKnown RBP7.15□□□□□ -1.26
USP28-206ENST00000538224 RAB17Q9H0T7 212 aa7.15□□□□□ -1.26
USP28-206ENST00000538224 PORCNQ9H237 461 aa7.15□□□□□ -1.26
USP28-206ENST00000538224 IKZF4Q9H2S9 585 aa7.15□□□□□ -1.26
USP28-206ENST00000538224 TAF1DQ9H5J8 278 aaPredicted RBP7.15□□□□□ -1.26
USP28-206ENST00000538224 TMEM134Q9H6X4 195 aa7.15□□□□□ -1.26
USP28-206ENST00000538224 GPRC5CQ9NQ84 441 aa7.15□□□□□ -1.26
USP28-206ENST00000538224 RAB20Q9NX57 234 aa7.15□□□□□ -1.26
USP28-206ENST00000538224 CWC15Q9P013 229 aaKnown RBP7.15□□□□□ -1.26
USP28-206ENST00000538224 UVRAGQ9P2Y5 699 aa7.15□□□□□ -1.26
USP28-206ENST00000538224 RASAL2Q9UJF2 1139 aa7.15□□□□□ -1.26
USP28-206ENST00000538224 GTF3C4Q9UKN8 822 aa7.15□□□□□ -1.26
USP28-206ENST00000538224 SCAF8Q9UPN6 1271 aaKnown RBP7.15□□□□□ -1.26
USP28-206ENST00000538224 STYXL1Q9Y6J8 313 aa7.15□□□□□ -1.26
USP28-206ENST00000538224 IGKV6D-21A0A0A0MT36 114 aa7.14□□□□□ -1.27
USP28-206ENST00000538224 A0A0G2JLL6 359 aaPredicted RBP7.14□□□□□ -1.27
USP28-206ENST00000538224 TMEM150BA6NC51 233 aa7.14□□□□□ -1.27
USP28-206ENST00000538224 ANKRD63C9JTQ0 380 aa7.14□□□□□ -1.27
USP28-206ENST00000538224 KRIT1O00522 736 aa7.14□□□□□ -1.27
USP28-206ENST00000538224 IRF6O14896 467 aa7.14□□□□□ -1.27
USP28-206ENST00000538224 BUB1BO60566 1050 aaPredicted RBP7.14□□□□□ -1.27
USP28-206ENST00000538224 RNF40O75150 1001 aa7.14□□□□□ -1.27
USP28-206ENST00000538224 USP2O75604 605 aaPredicted RBP7.14□□□□□ -1.27
USP28-206ENST00000538224 RGS20O76081 388 aa7.14□□□□□ -1.27
USP28-206ENST00000538224 ERLIN2O94905 339 aa7.14□□□□□ -1.27
USP28-206ENST00000538224 STBD1O95210 358 aa7.14□□□□□ -1.27
USP28-206ENST00000538224 TBXAS1P24557 533 aaPredicted RBP7.14□□□□□ -1.27
USP28-206ENST00000538224 ADSSP30520 456 aa7.14□□□□□ -1.27
USP28-206ENST00000538224 SLC26A2P50443 739 aa7.14□□□□□ -1.27
USP28-206ENST00000538224 DNA2P51530 1060 aa7.14□□□□□ -1.27
USP28-206ENST00000538224 DLG4P78352 724 aa7.14□□□□□ -1.27
USP28-206ENST00000538224 CLDN10P78369 228 aa7.14□□□□□ -1.27
USP28-206ENST00000538224 MAP2K1Q02750 393 aaPredicted RBP7.14□□□□□ -1.27
USP28-206ENST00000538224 GUCY2DQ02846 1103 aa7.14□□□□□ -1.27
USP28-206ENST00000538224 GRM1Q13255 1194 aa7.14□□□□□ -1.27
USP28-206ENST00000538224 DHX34Q14147 1143 aaKnown RBP7.14□□□□□ -1.27
USP28-206ENST00000538224 SURF1Q15526 300 aa7.14□□□□□ -1.27
USP28-206ENST00000538224 SEL1L2Q5TEA6 688 aa7.14□□□□□ -1.27
USP28-206ENST00000538224 METTL7BQ6UX53 244 aa7.14□□□□□ -1.27
USP28-206ENST00000538224 ZPBP2Q6X784 338 aa7.14□□□□□ -1.27
USP28-206ENST00000538224 LEKR1Q6ZMV7 388 aa7.14□□□□□ -1.27
USP28-206ENST00000538224 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.14□□□□□ -1.27
USP28-206ENST00000538224 PRRT2Q7Z6L0 340 aaPredicted RBP7.14□□□□□ -1.27
USP28-206ENST00000538224 CBWD2Q8IUF1 395 aa7.14□□□□□ -1.27
USP28-206ENST00000538224 EFCAB13Q8IY85 973 aa7.14□□□□□ -1.27
USP28-206ENST00000538224 ANKRD13AQ8IZ07 590 aa7.14□□□□□ -1.27
USP28-206ENST00000538224 RPUSD2Q8IZ73 545 aaKnown RBP7.14□□□□□ -1.27
USP28-206ENST00000538224 METTL13Q8N6R0 699 aa7.14□□□□□ -1.27
USP28-206ENST00000538224 OLIG1Q8TAK6 271 aa7.14□□□□□ -1.27
USP28-206ENST00000538224 TCP11Q8WWU5 503 aa7.14□□□□□ -1.27
USP28-206ENST00000538224 BBXQ8WY36 941 aaPredicted RBP7.14□□□□□ -1.27
USP28-206ENST00000538224 MS4A14Q96JA4 679 aa7.14□□□□□ -1.27
USP28-206ENST00000538224 FAM129AQ9BZQ8 928 aa7.14□□□□□ -1.27
USP28-206ENST00000538224 SPATC1LQ9H0A9 340 aa7.14□□□□□ -1.27
USP28-206ENST00000538224 WNT8AQ9H1J5 351 aa7.14□□□□□ -1.27
USP28-206ENST00000538224 C2orf40Q9H1Z8 148 aa7.14□□□□□ -1.27
USP28-206ENST00000538224 DHX33Q9H6R0 707 aaKnown RBP7.14□□□□□ -1.27
USP28-206ENST00000538224 AZI2Q9H6S1 392 aa7.14□□□□□ -1.27
USP28-206ENST00000538224 SUGCTQ9HAC7 445 aa7.14□□□□□ -1.27
USP28-206ENST00000538224 XPNPEP1Q9NQW7 623 aa7.14□□□□□ -1.27
USP28-206ENST00000538224 ST7Q9NRC1 585 aa7.14□□□□□ -1.27
USP28-206ENST00000538224 FAM114A2Q9NRY5 505 aa7.14□□□□□ -1.27
USP28-206ENST00000538224 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.14□□□□□ -1.27
USP28-206ENST00000538224 CALCOCO1Q9P1Z2 691 aa7.14□□□□□ -1.27
USP28-206ENST00000538224 CTTNBP2NLQ9P2B4 639 aa7.14□□□□□ -1.27
USP28-206ENST00000538224 DMGDHQ9UI17 866 aaKnown RBP7.14□□□□□ -1.27
USP28-206ENST00000538224 LCMT1Q9UIC8 334 aa7.14□□□□□ -1.27
USP28-206ENST00000538224 NOCTQ9UK39 431 aaKnown RBP7.14□□□□□ -1.27
USP28-206ENST00000538224 ADAM21Q9UKJ8 722 aa7.14□□□□□ -1.27
USP28-206ENST00000538224 FAN1Q9Y2M0 1017 aa7.14□□□□□ -1.27
USP28-206ENST00000538224 ADGRA3Q8IWK6 1321 aa7.13□□□□□ -1.27
USP28-206ENST00000538224 ZC3H4Q9UPT8 1303 aaKnown RBP7.13□□□□□ -1.27
USP28-206ENST00000538224 GOLGA8IPA6NC78 632 aa7.13□□□□□ -1.27
USP28-206ENST00000538224 FAM187AA6NFU0 413 aa7.13□□□□□ -1.27
USP28-206ENST00000538224 LRRIQ4A6NIV6 560 aa7.13□□□□□ -1.27
USP28-206ENST00000538224 SPDYE5A6NIY4 337 aa7.13□□□□□ -1.27
USP28-206ENST00000538224 GOLGA8JA6NMD2 632 aa7.13□□□□□ -1.27
USP28-206ENST00000538224 TISP43B9A030 160 aa7.13□□□□□ -1.27
USP28-206ENST00000538224 K7ERI5 159 aa7.13□□□□□ -1.27
USP28-206ENST00000538224 FARP2O94887 1054 aaPredicted RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms