RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 PEX19P40855 299 aa11.88□□□□□ -0.51
LINC00346-201ENST00000538077 NLRP11P59045 1033 aaKnown RBP11.88□□□□□ -0.51
LINC00346-201ENST00000538077 NCAPD2Q15021 1401 aa11.88□□□□□ -0.51
LINC00346-201ENST00000538077 RFX8Q6ZV50 586 aa11.88□□□□□ -0.51
LINC00346-201ENST00000538077 ZBED8Q8IZ13 594 aa11.88□□□□□ -0.51
LINC00346-201ENST00000538077 LZICQ8WZA0 190 aa11.88□□□□□ -0.51
LINC00346-201ENST00000538077 NR1H4Q96RI1 486 aaPredicted RBP11.88□□□□□ -0.51
LINC00346-201ENST00000538077 KIF17Q9P2E2 1029 aa11.88□□□□□ -0.51
LINC00346-201ENST00000538077 STAP1Q9ULZ2 295 aa11.88□□□□□ -0.51
LINC00346-201ENST00000538077 CAPN11Q9UMQ6 739 aa11.88□□□□□ -0.51
LINC00346-201ENST00000538077 PCDHA10Q9Y5I2 948 aa11.88□□□□□ -0.51
LINC00346-201ENST00000538077 SNX9Q9Y5X1 595 aa11.88□□□□□ -0.51
LINC00346-201ENST00000538077 MADDQ8WXG6 1647 aa11.88□□□□□ -0.51
LINC00346-201ENST00000538077 PRR23AA6NEV1 266 aa11.88□□□□□ -0.51
LINC00346-201ENST00000538077 ZRANB2O95218 330 aaKnown RBP eCLIP11.88□□□□□ -0.51
LINC00346-201ENST00000538077 AMHR2Q16671 573 aa11.88□□□□□ -0.51
LINC00346-201ENST00000538077 ADCK2Q7Z695 626 aa11.88□□□□□ -0.51
LINC00346-201ENST00000538077 OSBPL5Q9H0X9 879 aaPredicted RBP11.88□□□□□ -0.51
LINC00346-201ENST00000538077 HDAC6Q9UBN7 1215 aa11.88□□□□□ -0.51
LINC00346-201ENST00000538077 MROH2AA6NES4 1674 aa11.88□□□□□ -0.51
LINC00346-201ENST00000538077 CDH6P55285 790 aa11.88□□□□□ -0.51
LINC00346-201ENST00000538077 APBA1Q02410 837 aa11.88□□□□□ -0.51
LINC00346-201ENST00000538077 PDIA2Q13087 525 aaKnown RBP11.88□□□□□ -0.51
LINC00346-201ENST00000538077 COG2Q14746 738 aa11.88□□□□□ -0.51
LINC00346-201ENST00000538077 SRRM1Q8IYB3 904 aaKnown RBP11.88□□□□□ -0.51
LINC00346-201ENST00000538077 SUN2Q9UH99 717 aa11.88□□□□□ -0.51
LINC00346-201ENST00000538077 CPSF1Q10570 1443 aaKnown RBP11.88□□□□□ -0.51
LINC00346-201ENST00000538077 RASA4BC9J798 803 aa11.88□□□□□ -0.51
LINC00346-201ENST00000538077 RASA4O43374 803 aa11.88□□□□□ -0.51
LINC00346-201ENST00000538077 E2F6O75461 281 aa11.88□□□□□ -0.51
LINC00346-201ENST00000538077 CYBBP04839 570 aa11.88□□□□□ -0.51
LINC00346-201ENST00000538077 TRMT2AQ8IZ69 625 aaKnown RBP11.88□□□□□ -0.51
LINC00346-201ENST00000538077 CLMNQ96JQ2 1002 aa11.88□□□□□ -0.51
LINC00346-201ENST00000538077 ALG13Q9NP73 1137 aaKnown RBP11.88□□□□□ -0.51
LINC00346-201ENST00000538077 PPARGC1AQ9UBK2 798 aaKnown RBP11.88□□□□□ -0.51
LINC00346-201ENST00000538077 RPS6KA5O75582 802 aa11.87□□□□□ -0.51
LINC00346-201ENST00000538077 TPI1P60174 286 aa11.87□□□□□ -0.51
LINC00346-201ENST00000538077 MDH1BQ5I0G3 518 aa11.87□□□□□ -0.51
LINC00346-201ENST00000538077 IL31Q6EBC2 164 aa11.87□□□□□ -0.51
LINC00346-201ENST00000538077 ZKSCAN4Q969J2 545 aaPredicted RBP11.87□□□□□ -0.51
LINC00346-201ENST00000538077 ARL8AQ96BM9 186 aa11.87□□□□□ -0.51
LINC00346-201ENST00000538077 ERLEC1Q96DZ1 483 aa11.87□□□□□ -0.51
LINC00346-201ENST00000538077 TRPV6Q9H1D0 765 aa11.87□□□□□ -0.51
LINC00346-201ENST00000538077 PLEKHG2Q9H7P9 1386 aa11.87□□□□□ -0.51
LINC00346-201ENST00000538077 ALKQ9UM73 1620 aa11.87□□□□□ -0.51
LINC00346-201ENST00000538077 EPM2AIP1Q7L775 607 aaPredicted RBP11.87□□□□□ -0.51
LINC00346-201ENST00000538077 L3MBTL3Q96JM7 780 aaPredicted RBP11.87□□□□□ -0.51
LINC00346-201ENST00000538077 ELAC2Q9BQ52 826 aaKnown RBP11.87□□□□□ -0.51
LINC00346-201ENST00000538077 NBPF26B4DH59 902 aa11.87□□□□□ -0.51
LINC00346-201ENST00000538077 NBPF10Q6P3W6 841 aaKnown RBP11.87□□□□□ -0.51
LINC00346-201ENST00000538077 SLC25A41Q8N5S1 370 aa11.87□□□□□ -0.51
LINC00346-201ENST00000538077 NBPF15Q8N660 670 aa11.87□□□□□ -0.51
LINC00346-201ENST00000538077 GIPC2Q8TF65 315 aa11.87□□□□□ -0.51
LINC00346-201ENST00000538077 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.87□□□□□ -0.51
LINC00346-201ENST00000538077 DDHD2O94830 711 aa11.87□□□□□ -0.51
LINC00346-201ENST00000538077 KRT14P02533 472 aa11.87□□□□□ -0.51
LINC00346-201ENST00000538077 WDR72Q3MJ13 1102 aa11.87□□□□□ -0.51
LINC00346-201ENST00000538077 FASTKD1Q53R41 847 aaKnown RBP11.87□□□□□ -0.51
LINC00346-201ENST00000538077 RASIP1Q5U651 963 aa11.87□□□□□ -0.51
LINC00346-201ENST00000538077 HAUS6Q7Z4H7 955 aa11.87□□□□□ -0.51
LINC00346-201ENST00000538077 NSUN4Q96CB9 384 aaKnown RBP11.87□□□□□ -0.51
LINC00346-201ENST00000538077 KLHL29Q96CT2 875 aa11.87□□□□□ -0.51
LINC00346-201ENST00000538077 PGBD4Q96DM1 585 aa11.87□□□□□ -0.51
LINC00346-201ENST00000538077 FAM118BQ9BPY3 351 aa11.87□□□□□ -0.51
LINC00346-201ENST00000538077 KCNN4O15554 427 aa11.87□□□□□ -0.51
LINC00346-201ENST00000538077 GH1P01241 217 aa11.87□□□□□ -0.51
LINC00346-201ENST00000538077 SOX11P35716 441 aa11.87□□□□□ -0.51
LINC00346-201ENST00000538077 COBLL1Q53SF7 1204 aa11.87□□□□□ -0.51
LINC00346-201ENST00000538077 NUGGCQ68CJ6 796 aa11.87□□□□□ -0.51
LINC00346-201ENST00000538077 KRT39Q6A163 491 aa11.87□□□□□ -0.51
LINC00346-201ENST00000538077 TRIM15Q9C019 465 aa11.87□□□□□ -0.51
LINC00346-201ENST00000538077 KLK14Q9P0G3 267 aa11.87□□□□□ -0.51
LINC00346-201ENST00000538077 FAM205CA6NFA0 338 aa11.86□□□□□ -0.51
LINC00346-201ENST00000538077 DIAPH2O60879 1101 aa11.86□□□□□ -0.51
LINC00346-201ENST00000538077 NPTXRO95502 500 aa11.86□□□□□ -0.51
LINC00346-201ENST00000538077 NR1D1P20393 614 aa11.86□□□□□ -0.51
LINC00346-201ENST00000538077 ARL4DP49703 201 aa11.86□□□□□ -0.51
LINC00346-201ENST00000538077 NAALADL2Q58DX5 795 aa11.86□□□□□ -0.51
LINC00346-201ENST00000538077 DCUN1D1Q96GG9 259 aa11.86□□□□□ -0.51
LINC00346-201ENST00000538077 CEP19Q96LK0 163 aa11.86□□□□□ -0.51
LINC00346-201ENST00000538077 SRPK1Q96SB4 655 aaKnown RBP11.86□□□□□ -0.51
LINC00346-201ENST00000538077 FAM49BQ9NUQ9 324 aa11.86□□□□□ -0.51
LINC00346-201ENST00000538077 OCM2P0CE71 109 aa11.86□□□□□ -0.51
LINC00346-201ENST00000538077 OCMP0CE72 109 aaPredicted RBP11.86□□□□□ -0.51
LINC00346-201ENST00000538077 PPP3CCP48454 512 aa11.86□□□□□ -0.51
LINC00346-201ENST00000538077 TMEM132DQ14C87 1099 aa11.86□□□□□ -0.51
LINC00346-201ENST00000538077 DUOXA2Q1HG44 320 aa11.86□□□□□ -0.51
LINC00346-201ENST00000538077 TTC23LQ6PF05 361 aa11.86□□□□□ -0.51
LINC00346-201ENST00000538077 UBA3Q8TBC4 463 aa11.86□□□□□ -0.51
LINC00346-201ENST00000538077 SLC26A7Q8TE54 656 aa11.86□□□□□ -0.51
LINC00346-201ENST00000538077 SCG3Q8WXD2 468 aaKnown RBP11.86□□□□□ -0.51
LINC00346-201ENST00000538077 AGBL1Q96MI9 1066 aa11.86□□□□□ -0.51
LINC00346-201ENST00000538077 ZNF560Q96MR9 790 aa11.86□□□□□ -0.51
LINC00346-201ENST00000538077 CYP26B1Q9NR63 512 aa11.86□□□□□ -0.51
LINC00346-201ENST00000538077 HSPBP1Q9NZL4 362 aa11.86□□□□□ -0.51
LINC00346-201ENST00000538077 SENP1Q9P0U3 644 aa11.86□□□□□ -0.51
LINC00346-201ENST00000538077 DIP2BQ9P265 1576 aa11.86□□□□□ -0.51
LINC00346-201ENST00000538077 GCKP35557 465 aa11.86□□□□□ -0.51
LINC00346-201ENST00000538077 PID1Q7Z2X4 250 aa11.86□□□□□ -0.51
LINC00346-201ENST00000538077 MORC4Q8TE76 937 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms