RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 PCDHA7Q9UN72 937 aa23.48■■□□□ 1.35
PKP3-211ENST00000534401 INPP5FQ9Y2H2 1132 aa23.48■■□□□ 1.35
PKP3-211ENST00000534401 H0YCG3 227 aa23.47■■□□□ 1.35
PKP3-211ENST00000534401 IRS1P35568 1242 aa23.47■■□□□ 1.35
PKP3-211ENST00000534401 PBX3P40426 434 aa23.47■■□□□ 1.35
PKP3-211ENST00000534401 ALDH7A1P49419 539 aaKnown RBP23.47■■□□□ 1.35
PKP3-211ENST00000534401 CTC1Q2NKJ3 1217 aa23.47■■□□□ 1.35
PKP3-211ENST00000534401 COLGALT2Q8IYK4 626 aa23.47■■□□□ 1.35
PKP3-211ENST00000534401 ZFP42Q96MM3 310 aa23.47■■□□□ 1.35
PKP3-211ENST00000534401 ADPGKQ9BRR6 497 aa23.47■■□□□ 1.35
PKP3-211ENST00000534401 TARS2Q9BW92 718 aaKnown RBP23.47■■□□□ 1.35
PKP3-211ENST00000534401 ST6GALNAC4Q9H4F1 302 aa23.47■■□□□ 1.35
PKP3-211ENST00000534401 DNAJB4Q9UDY4 337 aa23.47■■□□□ 1.35
PKP3-211ENST00000534401 SPTBN5Q9NRC6 3674 aaKnown RBP23.47■■□□□ 1.35
PKP3-211ENST00000534401 MYMKA6NI61 221 aa23.46■■□□□ 1.35
PKP3-211ENST00000534401 EFEMP2O95967 443 aa23.46■■□□□ 1.35
PKP3-211ENST00000534401 AKAP5P24588 427 aa23.46■■□□□ 1.35
PKP3-211ENST00000534401 MLH1P40692 756 aa23.46■■□□□ 1.35
PKP3-211ENST00000534401 SLC11A1P49279 550 aa23.46■■□□□ 1.35
PKP3-211ENST00000534401 ERVFC1P60507 584 aa23.46■■□□□ 1.35
PKP3-211ENST00000534401 ZPBP2Q6X784 338 aa23.46■■□□□ 1.35
PKP3-211ENST00000534401 SV2BQ7L1I2 683 aa23.46■■□□□ 1.35
PKP3-211ENST00000534401 HAUS6Q7Z4H7 955 aa23.46■■□□□ 1.35
PKP3-211ENST00000534401 TLR9Q9NR96 1032 aa23.46■■□□□ 1.35
PKP3-211ENST00000534401 NCOR1O75376 2440 aa23.45■■□□□ 1.35
PKP3-211ENST00000534401 NCK2O43639 380 aa23.45■■□□□ 1.34
PKP3-211ENST00000534401 ZC3H11AO75152 810 aaKnown RBP eCLIP23.45■■□□□ 1.34
PKP3-211ENST00000534401 FAM13AO94988 1023 aa23.45■■□□□ 1.34
PKP3-211ENST00000534401 PIGRP01833 764 aa23.45■■□□□ 1.34
PKP3-211ENST00000534401 LIG1P18858 919 aa23.45■■□□□ 1.34
PKP3-211ENST00000534401 FOXD4L6Q3SYB3 417 aaPredicted RBP23.45■■□□□ 1.34
PKP3-211ENST00000534401 FOXD4L3Q6VB84 417 aaPredicted RBP23.45■■□□□ 1.34
PKP3-211ENST00000534401 TMEM173Q86WV6 379 aaPredicted RBP23.45■■□□□ 1.34
PKP3-211ENST00000534401 BCL7CQ8WUZ0 217 aaPredicted RBP23.45■■□□□ 1.34
PKP3-211ENST00000534401 DDX12PQ92771 950 aa23.45■■□□□ 1.34
PKP3-211ENST00000534401 HLA-CQ95604 372 aa23.45■■□□□ 1.34
PKP3-211ENST00000534401 IGSF21Q96ID5 467 aa23.45■■□□□ 1.34
PKP3-211ENST00000534401 STRA6Q9BX79 667 aa23.45■■□□□ 1.34
PKP3-211ENST00000534401 PANK2Q9BZ23 570 aa23.45■■□□□ 1.34
PKP3-211ENST00000534401 CDT1Q9H211 546 aa23.45■■□□□ 1.34
PKP3-211ENST00000534401 CUEDC2Q9H467 287 aa23.45■■□□□ 1.34
PKP3-211ENST00000534401 KBTBD4Q9NVX7 518 aa23.45■■□□□ 1.34
PKP3-211ENST00000534401 TTC28Q96AY4 2481 aa23.44■■□□□ 1.34
PKP3-211ENST00000534401 FRMD3A2A2Y4 597 aa23.44■■□□□ 1.34
PKP3-211ENST00000534401 TRAK2O60296 914 aa23.44■■□□□ 1.34
PKP3-211ENST00000534401 POMCP01189 267 aa23.44■■□□□ 1.34
PKP3-211ENST00000534401 STAT6P42226 847 aa23.44■■□□□ 1.34
PKP3-211ENST00000534401 SCNN1GP51170 649 aa23.44■■□□□ 1.34
PKP3-211ENST00000534401 GTF2BQ00403 316 aa23.44■■□□□ 1.34
PKP3-211ENST00000534401 KRT17Q04695 432 aa23.44■■□□□ 1.34
PKP3-211ENST00000534401 RNASELQ05823 741 aaKnown RBP23.44■■□□□ 1.34
PKP3-211ENST00000534401 HYAL1Q12794 435 aa23.44■■□□□ 1.34
PKP3-211ENST00000534401 NAB2Q15742 525 aa23.44■■□□□ 1.34
PKP3-211ENST00000534401 XKR4Q5GH76 650 aa23.44■■□□□ 1.34
PKP3-211ENST00000534401 RESP18Q5W5W9 173 aa23.44■■□□□ 1.34
PKP3-211ENST00000534401 CNNM4Q6P4Q7 775 aa23.44■■□□□ 1.34
PKP3-211ENST00000534401 APBB1IPQ7Z5R6 666 aaPredicted RBP23.44■■□□□ 1.34
PKP3-211ENST00000534401 DDX53Q86TM3 631 aaKnown RBP23.44■■□□□ 1.34
PKP3-211ENST00000534401 MYCT1Q8N699 235 aa23.44■■□□□ 1.34
PKP3-211ENST00000534401 PABPC5Q96DU9 382 aaKnown RBP23.44■■□□□ 1.34
PKP3-211ENST00000534401 APOL6Q9BWW8 343 aa23.44■■□□□ 1.34
PKP3-211ENST00000534401 SNTG2Q9NY99 539 aa23.44■■□□□ 1.34
PKP3-211ENST00000534401 PUF60Q9UHX1 559 aaKnown RBP23.44■■□□□ 1.34
PKP3-211ENST00000534401 CITO14578 2027 aa23.43■■□□□ 1.34
PKP3-211ENST00000534401 NT5C1B-RDH14C9J2C7 533 aa23.43■■□□□ 1.34
PKP3-211ENST00000534401 PTGESO14684 152 aa23.43■■□□□ 1.34
PKP3-211ENST00000534401 TOM1L1O75674 476 aa23.43■■□□□ 1.34
PKP3-211ENST00000534401 RECQL4O94761 1208 aa23.43■■□□□ 1.34
PKP3-211ENST00000534401 ALDH2P05091 517 aa23.43■■□□□ 1.34
PKP3-211ENST00000534401 MCF2P10911 925 aa23.43■■□□□ 1.34
PKP3-211ENST00000534401 ABCD1P33897 745 aa23.43■■□□□ 1.34
PKP3-211ENST00000534401 GRM5P41594 1212 aa23.43■■□□□ 1.34
PKP3-211ENST00000534401 MRPS5P82675 430 aaKnown RBP23.43■■□□□ 1.34
PKP3-211ENST00000534401 GRIK3Q13003 919 aa23.43■■□□□ 1.34
PKP3-211ENST00000534401 MPZL3Q6UWV2 235 aa23.43■■□□□ 1.34
PKP3-211ENST00000534401 ALKAL1Q6UXT8 129 aa23.43■■□□□ 1.34
PKP3-211ENST00000534401 LEO1Q8WVC0 666 aaPredicted RBP23.43■■□□□ 1.34
PKP3-211ENST00000534401 ASB2Q96Q27 587 aa23.43■■□□□ 1.34
PKP3-211ENST00000534401 VN1R3Q9BXE9 311 aa23.43■■□□□ 1.34
PKP3-211ENST00000534401 UBE2ZQ9H832 354 aaPredicted RBP23.43■■□□□ 1.34
PKP3-211ENST00000534401 NGRNQ9NPE2 291 aaKnown RBP23.43■■□□□ 1.34
PKP3-211ENST00000534401 SEL1LQ9UBV2 794 aa23.43■■□□□ 1.34
PKP3-211ENST00000534401 PARP2Q9UGN5 583 aa23.43■■□□□ 1.34
PKP3-211ENST00000534401 NRP1O14786 923 aa23.42■■□□□ 1.34
PKP3-211ENST00000534401 PPP1R37O75864 691 aa23.42■■□□□ 1.34
PKP3-211ENST00000534401 KRT18P05783 430 aaKnown RBP23.42■■□□□ 1.34
PKP3-211ENST00000534401 MCL1Q07820 350 aa23.42■■□□□ 1.34
PKP3-211ENST00000534401 STRN3Q13033 797 aa23.42■■□□□ 1.34
PKP3-211ENST00000534401 ADGRD2Q7Z7M1 963 aa23.42■■□□□ 1.34
PKP3-211ENST00000534401 RNF168Q8IYW5 571 aaPredicted RBP23.42■■□□□ 1.34
PKP3-211ENST00000534401 PDILTQ8N807 584 aa23.42■■□□□ 1.34
PKP3-211ENST00000534401 TMEM169Q96HH4 297 aa23.42■■□□□ 1.34
PKP3-211ENST00000534401 ZBTB45Q96K62 511 aaPredicted RBP23.42■■□□□ 1.34
PKP3-211ENST00000534401 CXCL16Q9H2A7 254 aa23.42■■□□□ 1.34
PKP3-211ENST00000534401 KLK14Q9P0G3 267 aa23.42■■□□□ 1.34
PKP3-211ENST00000534401 TBX20Q9UMR3 447 aa23.42■■□□□ 1.34
PKP3-211ENST00000534401 FAN1Q9Y2M0 1017 aa23.42■■□□□ 1.34
PKP3-211ENST00000534401 IRAK3Q9Y616 596 aa23.42■■□□□ 1.34
PKP3-211ENST00000534401 XIRP2A4UGR9 3374 aa23.41■■□□□ 1.34
PKP3-211ENST00000534401 TBCAO75347 108 aaKnown RBP23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms