RNA–Protein interactions for RNA: ENST00000534375.1

PICALM-222, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 2

Gene PICALM, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-222	ENST00000534375	TYR	P14679	529 aa		4.82	□□□□□ -1.64
PICALM-222	ENST00000534375	PRKCA	P17252	672 aa		4.82	□□□□□ -1.64
PICALM-222	ENST00000534375	SMARCA1	P28370	1054 aa		4.82	□□□□□ -1.64
PICALM-222	ENST00000534375	CD96	P40200	585 aa		4.82	□□□□□ -1.64
PICALM-222	ENST00000534375	ALDH9A1	P49189	494 aa		4.82	□□□□□ -1.64
PICALM-222	ENST00000534375	NOMO1	Q15155	1222 aa		4.82	□□□□□ -1.64
PICALM-222	ENST00000534375	TAF5	Q15542	800 aa		4.82	□□□□□ -1.64
PICALM-222	ENST00000534375	CNGA2	Q16280	664 aa		4.82	□□□□□ -1.64
PICALM-222	ENST00000534375	PRR16	Q569H4	304 aa		4.82	□□□□□ -1.64
PICALM-222	ENST00000534375	FKBP15	Q5T1M5	1219 aa		4.82	□□□□□ -1.64
PICALM-222	ENST00000534375	INTS11	Q5TA45	600 aa	Known RBP	4.82	□□□□□ -1.64
PICALM-222	ENST00000534375	JMJD6	Q6NYC1	403 aa	Predicted RBP	4.82	□□□□□ -1.64
PICALM-222	ENST00000534375	FAM180B	Q6P0A1	224 aa		4.82	□□□□□ -1.64
PICALM-222	ENST00000534375	PGBD2	Q6P3X8	592 aa		4.82	□□□□□ -1.64
PICALM-222	ENST00000534375	HEATR3	Q7Z4Q2	680 aa		4.82	□□□□□ -1.64
PICALM-222	ENST00000534375	TTC7B	Q86TV6	843 aa		4.82	□□□□□ -1.64
PICALM-222	ENST00000534375	TRIM48	Q8IWZ4	208 aa		4.82	□□□□□ -1.64
PICALM-222	ENST00000534375	RHOT1	Q8IXI2	618 aa		4.82	□□□□□ -1.64
PICALM-222	ENST00000534375	SH2D3C	Q8N5H7	860 aa		4.82	□□□□□ -1.64
PICALM-222	ENST00000534375	CDYL2	Q8N8U2	506 aa		4.82	□□□□□ -1.64
PICALM-222	ENST00000534375	NAXE	Q8NCW5	288 aa		4.82	□□□□□ -1.64
PICALM-222	ENST00000534375	NUP43	Q8NFH3	380 aa		4.82	□□□□□ -1.64
PICALM-222	ENST00000534375	NETO1	Q8TDF5	533 aa		4.82	□□□□□ -1.64
PICALM-222	ENST00000534375	MRGPRX4	Q96LA9	322 aa		4.82	□□□□□ -1.64
PICALM-222	ENST00000534375	RMDN3	Q96TC7	470 aa		4.82	□□□□□ -1.64
PICALM-222	ENST00000534375	VRK1	Q99986	396 aa	Predicted RBP	4.82	□□□□□ -1.64
PICALM-222	ENST00000534375	SOX7	Q9BT81	388 aa		4.82	□□□□□ -1.64
PICALM-222	ENST00000534375	COLEC11	Q9BWP8	271 aa		4.82	□□□□□ -1.64
PICALM-222	ENST00000534375	SLC39A2	Q9NP94	309 aa		4.82	□□□□□ -1.64
PICALM-222	ENST00000534375	RBM12	Q9NTZ6	932 aa	Known RBP	4.82	□□□□□ -1.64
PICALM-222	ENST00000534375	LMBRD1	Q9NUN5	540 aa		4.82	□□□□□ -1.64
PICALM-222	ENST00000534375	GGA3	Q9NZ52	723 aa		4.82	□□□□□ -1.64
PICALM-222	ENST00000534375	PIM2	Q9P1W9	311 aa		4.82	□□□□□ -1.64
PICALM-222	ENST00000534375	ABCF2	Q9UG63	623 aa		4.82	□□□□□ -1.64
PICALM-222	ENST00000534375	OGDHL	Q9ULD0	1010 aa		4.82	□□□□□ -1.64
PICALM-222	ENST00000534375	MAGED2	Q9UNF1	606 aa	Predicted RBP	4.82	□□□□□ -1.64
PICALM-222	ENST00000534375	CRYL1	Q9Y2S2	319 aa		4.82	□□□□□ -1.64
PICALM-222	ENST00000534375	SNX11	Q9Y5W9	270 aa		4.82	□□□□□ -1.64
PICALM-222	ENST00000534375	TAF6L	Q9Y6J9	622 aa		4.82	□□□□□ -1.64
PICALM-222	ENST00000534375	OAS3	Q9Y6K5	1087 aa	Known RBP	4.82	□□□□□ -1.64
PICALM-222	ENST00000534375	TMEM265	A0A087WTH1	108 aa		4.81	□□□□□ -1.64
PICALM-222	ENST00000534375		A0A1W2PPL8	197 aa		4.81	□□□□□ -1.64
PICALM-222	ENST00000534375	ACKR2	O00590	384 aa		4.81	□□□□□ -1.64
PICALM-222	ENST00000534375	FFAR2	O15552	330 aa		4.81	□□□□□ -1.64
PICALM-222	ENST00000534375	PLA2G6	O60733	806 aa		4.81	□□□□□ -1.64
PICALM-222	ENST00000534375	CNOT4	O95628	575 aa	Known RBP	4.81	□□□□□ -1.64
PICALM-222	ENST00000534375	CD4	P01730	458 aa		4.81	□□□□□ -1.64
PICALM-222	ENST00000534375	BRAF	P15056	766 aa		4.81	□□□□□ -1.64
PICALM-222	ENST00000534375	RPL17	P18621	184 aa	Known RBP	4.81	□□□□□ -1.64
PICALM-222	ENST00000534375	PTGS1	P23219	599 aa		4.81	□□□□□ -1.64
PICALM-222	ENST00000534375	TXK	P42681	527 aa		4.81	□□□□□ -1.64
PICALM-222	ENST00000534375	SUMO3	P55854	103 aa	Predicted RBP	4.81	□□□□□ -1.64
PICALM-222	ENST00000534375	MPP1	Q00013	466 aa		4.81	□□□□□ -1.64
PICALM-222	ENST00000534375	TOMM20	Q15388	145 aa		4.81	□□□□□ -1.64
PICALM-222	ENST00000534375	CPSF6	Q16630	551 aa	Known RBP eCLIP	4.81	□□□□□ -1.64
PICALM-222	ENST00000534375	PFKFB4	Q16877	469 aa		4.81	□□□□□ -1.64
PICALM-222	ENST00000534375	L1TD1	Q5T7N2	865 aa	Known RBP	4.81	□□□□□ -1.64
PICALM-222	ENST00000534375	THEMIS2	Q5TEJ8	643 aa		4.81	□□□□□ -1.64
PICALM-222	ENST00000534375	C16orf54	Q6UWD8	224 aa		4.81	□□□□□ -1.64
PICALM-222	ENST00000534375	RSRC2	Q7L4I2	434 aa	Known RBP	4.81	□□□□□ -1.64
PICALM-222	ENST00000534375	PROSER1	Q86XN7	944 aa		4.81	□□□□□ -1.64
PICALM-222	ENST00000534375	ANKRD18A	Q8IVF6	992 aa		4.81	□□□□□ -1.64
PICALM-222	ENST00000534375	ATG16L2	Q8NAA4	619 aa		4.81	□□□□□ -1.64
PICALM-222	ENST00000534375	NETO2	Q8NC67	525 aa		4.81	□□□□□ -1.64
PICALM-222	ENST00000534375	C3orf20	Q8ND61	904 aa		4.81	□□□□□ -1.64
PICALM-222	ENST00000534375	NGDN	Q8NEJ9	315 aa	Known RBP	4.81	□□□□□ -1.64
PICALM-222	ENST00000534375	TRAPPC12	Q8WVT3	735 aa		4.81	□□□□□ -1.64
PICALM-222	ENST00000534375	MAML1	Q92585	1016 aa		4.81	□□□□□ -1.64
PICALM-222	ENST00000534375	CLPTM1L	Q96KA5	538 aa		4.81	□□□□□ -1.64
PICALM-222	ENST00000534375	MSLNL	Q96KJ4	702 aa		4.81	□□□□□ -1.64
PICALM-222	ENST00000534375	MRGPRX1	Q96LB2	322 aa		4.81	□□□□□ -1.64
PICALM-222	ENST00000534375	NOL10	Q9BSC4	688 aa	Known RBP	4.81	□□□□□ -1.64
PICALM-222	ENST00000534375	SORBS1	Q9BX66	1292 aa	Known RBP	4.81	□□□□□ -1.64
PICALM-222	ENST00000534375	STK33	Q9BYT3	514 aa		4.81	□□□□□ -1.64
PICALM-222	ENST00000534375	OSBPL5	Q9H0X9	879 aa	Predicted RBP	4.81	□□□□□ -1.64
PICALM-222	ENST00000534375	CARS2	Q9HA77	564 aa	Known RBP	4.81	□□□□□ -1.64
PICALM-222	ENST00000534375	OBP2B	Q9NPH6	170 aa		4.81	□□□□□ -1.64
PICALM-222	ENST00000534375	COL20A1	Q9P218	1284 aa		4.81	□□□□□ -1.64
PICALM-222	ENST00000534375	CPA4	Q9UI42	421 aa		4.81	□□□□□ -1.64
PICALM-222	ENST00000534375	LGALS16	A8MUM7	142 aa		4.8	□□□□□ -1.64
PICALM-222	ENST00000534375	ISM1	B1AKI9	464 aa		4.8	□□□□□ -1.64
PICALM-222	ENST00000534375	FOXN3	O00409	490 aa	Predicted RBP	4.8	□□□□□ -1.64
PICALM-222	ENST00000534375	NPC1	O15118	1278 aa		4.8	□□□□□ -1.64
PICALM-222	ENST00000534375	ARHGAP6	O43182	974 aa		4.8	□□□□□ -1.64
PICALM-222	ENST00000534375	SGTA	O43765	313 aa		4.8	□□□□□ -1.64
PICALM-222	ENST00000534375	SKAP2	O75563	359 aa	Predicted RBP	4.8	□□□□□ -1.64
PICALM-222	ENST00000534375	LRG1	P02750	347 aa		4.8	□□□□□ -1.64
PICALM-222	ENST00000534375	TH	P07101	528 aa		4.8	□□□□□ -1.64
PICALM-222	ENST00000534375	TAL1	P17542	331 aa	Predicted RBP	4.8	□□□□□ -1.64
PICALM-222	ENST00000534375	SYN1	P17600	705 aa		4.8	□□□□□ -1.64
PICALM-222	ENST00000534375	CAPN3	P20807	821 aa		4.8	□□□□□ -1.64
PICALM-222	ENST00000534375	EEF1G	P26641	437 aa	Known RBP	4.8	□□□□□ -1.64
PICALM-222	ENST00000534375	GPR15	P49685	360 aa		4.8	□□□□□ -1.64
PICALM-222	ENST00000534375	ITGA8	P53708	1063 aa		4.8	□□□□□ -1.64
PICALM-222	ENST00000534375	CDC42EP1	Q00587	391 aa		4.8	□□□□□ -1.64
PICALM-222	ENST00000534375	G3BP1	Q13283	466 aa	Known RBP eCLIP	4.8	□□□□□ -1.64
PICALM-222	ENST00000534375	SNAPC2	Q13487	334 aa		4.8	□□□□□ -1.64
PICALM-222	ENST00000534375	ARL13B	Q3SXY8	428 aa		4.8	□□□□□ -1.64
PICALM-222	ENST00000534375	ZACN	Q401N2	412 aa		4.8	□□□□□ -1.64
PICALM-222	ENST00000534375	KHDC1	Q4VXA5	237 aa	Known RBP	4.8	□□□□□ -1.64

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