RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 FOXR2Q6PJQ5 311 aa13.02□□□□□ -0.33
COMMD9-208ENST00000533643 SLC9A9Q8IVB4 645 aa13.02□□□□□ -0.33
COMMD9-208ENST00000533643 ZSWIM2Q8NEG5 633 aa13.02□□□□□ -0.33
COMMD9-208ENST00000533643 TMEM174Q8WUU8 243 aa13.02□□□□□ -0.33
COMMD9-208ENST00000533643 POMGNT1Q8WZA1 660 aa13.02□□□□□ -0.33
COMMD9-208ENST00000533643 TSG101Q99816 390 aa13.02□□□□□ -0.33
COMMD9-208ENST00000533643 LBHD1Q9BQE6 289 aaPredicted RBP13.02□□□□□ -0.33
COMMD9-208ENST00000533643 ADPGKQ9BRR6 497 aa13.02□□□□□ -0.33
COMMD9-208ENST00000533643 MSTO1Q9BUK6 570 aa13.02□□□□□ -0.33
COMMD9-208ENST00000533643 TRAIPQ9BWF2 469 aa13.02□□□□□ -0.33
COMMD9-208ENST00000533643 RGS18Q9NS28 235 aa13.02□□□□□ -0.33
COMMD9-208ENST00000533643 HSPBP1Q9NZL4 362 aa13.02□□□□□ -0.33
COMMD9-208ENST00000533643 AGO2Q9UKV8 859 aaKnown RBP13.02□□□□□ -0.33
COMMD9-208ENST00000533643 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.01□□□□□ -0.33
COMMD9-208ENST00000533643 BICDL2A1A5D9 508 aa13.01□□□□□ -0.33
COMMD9-208ENST00000533643 C9IYK1 514 aa13.01□□□□□ -0.33
COMMD9-208ENST00000533643 OGTO15294 1046 aa13.01□□□□□ -0.33
COMMD9-208ENST00000533643 FAM189A1O60320 539 aa13.01□□□□□ -0.33
COMMD9-208ENST00000533643 PFKMP08237 780 aa13.01□□□□□ -0.33
COMMD9-208ENST00000533643 HARSP12081 509 aaKnown RBP13.01□□□□□ -0.33
COMMD9-208ENST00000533643 FAM189BP81408 668 aa13.01□□□□□ -0.33
COMMD9-208ENST00000533643 IKBKEQ14164 716 aa13.01□□□□□ -0.33
COMMD9-208ENST00000533643 MYBPC2Q14324 1141 aa13.01□□□□□ -0.33
COMMD9-208ENST00000533643 ZBTB41Q5SVQ8 909 aa13.01□□□□□ -0.33
COMMD9-208ENST00000533643 APBB1IPQ7Z5R6 666 aaPredicted RBP13.01□□□□□ -0.33
COMMD9-208ENST00000533643 ZC3H3Q8IXZ2 948 aaKnown RBP13.01□□□□□ -0.33
COMMD9-208ENST00000533643 SMG8Q8ND04 991 aaKnown RBP13.01□□□□□ -0.33
COMMD9-208ENST00000533643 ENOX1Q8TC92 643 aaKnown RBP13.01□□□□□ -0.33
COMMD9-208ENST00000533643 NAT10Q9H0A0 1025 aaKnown RBP13.01□□□□□ -0.33
COMMD9-208ENST00000533643 TSPY26PQ9H489 355 aa13.01□□□□□ -0.33
COMMD9-208ENST00000533643 PCDHB2Q9Y5E7 798 aa13.01□□□□□ -0.33
COMMD9-208ENST00000533643 TET1Q8NFU7 2136 aa13□□□□□ -0.33
COMMD9-208ENST00000533643 A0A0U1RQF3 1178 aa13□□□□□ -0.33
COMMD9-208ENST00000533643 GOLGA8IPA6NC78 632 aa13□□□□□ -0.33
COMMD9-208ENST00000533643 GOLGA8JA6NMD2 632 aa13□□□□□ -0.33
COMMD9-208ENST00000533643 KIAA0391O15091 583 aaKnown RBP13□□□□□ -0.33
COMMD9-208ENST00000533643 ZNF623O75123 536 aa13□□□□□ -0.33
COMMD9-208ENST00000533643 NR2F2P24468 414 aa13□□□□□ -0.33
COMMD9-208ENST00000533643 ZNF165P49910 485 aa13□□□□□ -0.33
COMMD9-208ENST00000533643 ADAM9Q13443 819 aa13□□□□□ -0.33
COMMD9-208ENST00000533643 SEZ6Q53EL9 994 aa13□□□□□ -0.33
COMMD9-208ENST00000533643 TMEM240Q5SV17 173 aa13□□□□□ -0.33
COMMD9-208ENST00000533643 CRELD2Q6UXH1 353 aaPredicted RBP13□□□□□ -0.33
COMMD9-208ENST00000533643 LRRC55Q6ZSA7 311 aa13□□□□□ -0.33
COMMD9-208ENST00000533643 ZNF365Q70YC5 407 aa13□□□□□ -0.33
COMMD9-208ENST00000533643 SLC24A5Q71RS6 500 aa13□□□□□ -0.33
COMMD9-208ENST00000533643 MRPL10Q7Z7H8 261 aaKnown RBP13□□□□□ -0.33
COMMD9-208ENST00000533643 THNSL1Q8IYQ7 743 aa13□□□□□ -0.33
COMMD9-208ENST00000533643 CEP120Q8N960 986 aa13□□□□□ -0.33
COMMD9-208ENST00000533643 XXYLT1Q8NBI6 393 aa13□□□□□ -0.33
COMMD9-208ENST00000533643 SAAL1Q96ER3 474 aa13□□□□□ -0.33
COMMD9-208ENST00000533643 EEF2KMTQ96G04 330 aa13□□□□□ -0.33
COMMD9-208ENST00000533643 FBXL18Q96ME1 805 aa13□□□□□ -0.33
COMMD9-208ENST00000533643 BPIFA3Q9BQP9 254 aa13□□□□□ -0.33
COMMD9-208ENST00000533643 ANP32EQ9BTT0 268 aa13□□□□□ -0.33
COMMD9-208ENST00000533643 RNF39Q9H2S5 420 aa13□□□□□ -0.33
COMMD9-208ENST00000533643 C1orf112Q9NSG2 853 aa13□□□□□ -0.33
COMMD9-208ENST00000533643 FAM105AQ9NUU6 356 aa13□□□□□ -0.33
COMMD9-208ENST00000533643 HES2Q9Y543 173 aa13□□□□□ -0.33
COMMD9-208ENST00000533643 IPPQ9Y573 584 aa13□□□□□ -0.33
COMMD9-208ENST00000533643 LTBP2Q14767 1821 aa12.99□□□□□ -0.33
COMMD9-208ENST00000533643 ABHD14A-ACY1A0A1B0GW23 586 aa12.99□□□□□ -0.33
COMMD9-208ENST00000533643 CETN3O15182 167 aa12.99□□□□□ -0.33
COMMD9-208ENST00000533643 EXTL3O43909 919 aa12.99□□□□□ -0.33
COMMD9-208ENST00000533643 EXOC3O60645 756 aa12.99□□□□□ -0.33
COMMD9-208ENST00000533643 CAVIN2O95810 425 aa12.99□□□□□ -0.33
COMMD9-208ENST00000533643 FGBP02675 491 aa12.99□□□□□ -0.33
COMMD9-208ENST00000533643 STAG3L1P0CL83 205 aa12.99□□□□□ -0.33
COMMD9-208ENST00000533643 ATF7P17544 494 aaPredicted RBP12.99□□□□□ -0.33
COMMD9-208ENST00000533643 RPL13P26373 211 aaKnown RBP12.99□□□□□ -0.33
COMMD9-208ENST00000533643 GRM5P41594 1212 aa12.99□□□□□ -0.33
COMMD9-208ENST00000533643 MAGEA10P43363 369 aaPredicted RBP12.99□□□□□ -0.33
COMMD9-208ENST00000533643 CASP4P49662 377 aa12.99□□□□□ -0.33
COMMD9-208ENST00000533643 ACOT2P49753 483 aa12.99□□□□□ -0.33
COMMD9-208ENST00000533643 RAB27AP51159 221 aa12.99□□□□□ -0.33
COMMD9-208ENST00000533643 FKBP3Q00688 224 aaKnown RBP12.99□□□□□ -0.33
COMMD9-208ENST00000533643 IQCB1Q15051 598 aa12.99□□□□□ -0.33
COMMD9-208ENST00000533643 SPATA1Q5VX52 437 aa12.99□□□□□ -0.33
COMMD9-208ENST00000533643 ZNF598Q86UK7 904 aaKnown RBP12.99□□□□□ -0.33
COMMD9-208ENST00000533643 ECHDC2Q86YB7 292 aa12.99□□□□□ -0.33
COMMD9-208ENST00000533643 DHX40Q8IX18 779 aaKnown RBP12.99□□□□□ -0.33
COMMD9-208ENST00000533643 TMEM192Q8IY95 271 aa12.99□□□□□ -0.33
COMMD9-208ENST00000533643 GPD1LQ8N335 351 aa12.99□□□□□ -0.33
COMMD9-208ENST00000533643 CSGALNACT2Q8N6G5 542 aa12.99□□□□□ -0.33
COMMD9-208ENST00000533643 AOPEPQ8N6M6 819 aa12.99□□□□□ -0.33
COMMD9-208ENST00000533643 FAM213AQ9BRX8 229 aa12.99□□□□□ -0.33
COMMD9-208ENST00000533643 SRRTQ9BXP5 876 aaKnown RBP12.99□□□□□ -0.33
COMMD9-208ENST00000533643 TRIM6Q9C030 488 aaPredicted RBP12.99□□□□□ -0.33
COMMD9-208ENST00000533643 NXF3Q9H4D5 531 aaKnown RBP12.99□□□□□ -0.33
COMMD9-208ENST00000533643 CBX8Q9HC52 389 aa12.99□□□□□ -0.33
COMMD9-208ENST00000533643 SNTG2Q9NY99 539 aa12.99□□□□□ -0.33
COMMD9-208ENST00000533643 CPSF3Q9UKF6 684 aaKnown RBP12.99□□□□□ -0.33
COMMD9-208ENST00000533643 MEIS3P2A8K0S8 358 aa12.98□□□□□ -0.33
COMMD9-208ENST00000533643 H0YGN5 161 aa12.98□□□□□ -0.33
COMMD9-208ENST00000533643 MEFVO15553 781 aaPredicted RBP12.98□□□□□ -0.33
COMMD9-208ENST00000533643 EFCAB14O75071 495 aa12.98□□□□□ -0.33
COMMD9-208ENST00000533643 AKAP3O75969 853 aa12.98□□□□□ -0.33
COMMD9-208ENST00000533643 LDHAP00338 332 aaKnown RBP12.98□□□□□ -0.33
COMMD9-208ENST00000533643 ADRB2P07550 413 aa12.98□□□□□ -0.33
COMMD9-208ENST00000533643 CLTAP09496 248 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms