RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 P4HBP07237 508 aaKnown RBP9.67□□□□□ -0.86
COPB1-210ENST00000533533 CNPP09543 421 aaKnown RBP9.67□□□□□ -0.86
COPB1-210ENST00000533533 KLRC2P26717 231 aa9.67□□□□□ -0.86
COPB1-210ENST00000533533 TOB1P50616 345 aaPredicted RBP9.67□□□□□ -0.86
COPB1-210ENST00000533533 PTGDRQ13258 359 aa9.67□□□□□ -0.86
COPB1-210ENST00000533533 ORC2Q13416 577 aaPredicted RBP9.67□□□□□ -0.86
COPB1-210ENST00000533533 TDGQ13569 410 aa9.67□□□□□ -0.86
COPB1-210ENST00000533533 BECN1Q14457 450 aa9.67□□□□□ -0.86
COPB1-210ENST00000533533 PLA2G4FQ68DD2 849 aa9.67□□□□□ -0.86
COPB1-210ENST00000533533 CWF19L1Q69YN2 538 aaKnown RBP9.67□□□□□ -0.86
COPB1-210ENST00000533533 C15orf39Q6ZRI6 1047 aa9.67□□□□□ -0.86
COPB1-210ENST00000533533 BRAPQ7Z569 592 aa9.67□□□□□ -0.86
COPB1-210ENST00000533533 MRPL10Q7Z7H8 261 aaKnown RBP9.67□□□□□ -0.86
COPB1-210ENST00000533533 FLCNQ8NFG4 579 aa9.67□□□□□ -0.86
COPB1-210ENST00000533533 ERMNQ8TAM6 284 aa9.67□□□□□ -0.86
COPB1-210ENST00000533533 URGCPQ8TCY9 931 aa9.67□□□□□ -0.86
COPB1-210ENST00000533533 NKD2Q969F2 451 aaPredicted RBP9.67□□□□□ -0.86
COPB1-210ENST00000533533 MTMR9Q96QG7 549 aa9.67□□□□□ -0.86
COPB1-210ENST00000533533 EIF2AK1Q9BQI3 630 aaKnown RBP9.67□□□□□ -0.86
COPB1-210ENST00000533533 LXNQ9BS40 222 aa9.67□□□□□ -0.86
COPB1-210ENST00000533533 TMEM175Q9BSA9 504 aa9.67□□□□□ -0.86
COPB1-210ENST00000533533 KCNK12Q9HB15 430 aa9.67□□□□□ -0.86
COPB1-210ENST00000533533 MRPL17Q9NRX2 175 aaKnown RBP9.67□□□□□ -0.86
COPB1-210ENST00000533533 AGPAT5Q9NUQ2 364 aa9.67□□□□□ -0.86
COPB1-210ENST00000533533 KANSL3Q9P2N6 904 aa9.67□□□□□ -0.86
COPB1-210ENST00000533533 COL4A3BPQ9Y5P4 624 aa9.67□□□□□ -0.86
COPB1-210ENST00000533533 F5P12259 2224 aa9.67□□□□□ -0.86
COPB1-210ENST00000533533 FANCMQ8IYD8 2048 aa9.66□□□□□ -0.86
COPB1-210ENST00000533533 CNTNAP2Q9UHC6 1331 aa9.66□□□□□ -0.86
COPB1-210ENST00000533533 PI15O43692 258 aa9.66□□□□□ -0.86
COPB1-210ENST00000533533 STX6O43752 255 aa9.66□□□□□ -0.86
COPB1-210ENST00000533533 NPR3P17342 541 aa9.66□□□□□ -0.86
COPB1-210ENST00000533533 AOC1P19801 751 aa9.66□□□□□ -0.86
COPB1-210ENST00000533533 HOXA11P31270 313 aaPredicted RBP9.66□□□□□ -0.86
COPB1-210ENST00000533533 AFF1P51825 1210 aaKnown RBP9.66□□□□□ -0.86
COPB1-210ENST00000533533 NPEPPSP55786 919 aa9.66□□□□□ -0.86
COPB1-210ENST00000533533 ZRSR1Q15695 479 aaKnown RBP9.66□□□□□ -0.86
COPB1-210ENST00000533533 DTHD1Q6ZMT9 781 aa9.66□□□□□ -0.86
COPB1-210ENST00000533533 OTUD6AQ7L8S5 288 aa9.66□□□□□ -0.86
COPB1-210ENST00000533533 SRGAP1Q7Z6B7 1085 aa9.66□□□□□ -0.86
COPB1-210ENST00000533533 CCDC105Q8IYK2 499 aa9.66□□□□□ -0.86
COPB1-210ENST00000533533 CMASQ8NFW8 434 aaPredicted RBP9.66□□□□□ -0.86
COPB1-210ENST00000533533 SLC7A3Q8WY07 619 aa9.66□□□□□ -0.86
COPB1-210ENST00000533533 CEP170P1Q96L14 293 aa9.66□□□□□ -0.86
COPB1-210ENST00000533533 FAM193BQ96PV7 902 aaPredicted RBP9.66□□□□□ -0.86
COPB1-210ENST00000533533 RTP3Q9BQQ7 232 aa9.66□□□□□ -0.86
COPB1-210ENST00000533533 RAB34Q9BZG1 259 aa9.66□□□□□ -0.86
COPB1-210ENST00000533533 ZSWIM4Q9H7M6 989 aa9.66□□□□□ -0.86
COPB1-210ENST00000533533 RSAD1Q9HA92 442 aa9.66□□□□□ -0.86
COPB1-210ENST00000533533 BMP2KQ9NSY1 1161 aaPredicted RBP9.66□□□□□ -0.86
COPB1-210ENST00000533533 IGSF9Q9P2J2 1179 aa9.66□□□□□ -0.86
COPB1-210ENST00000533533 FBXL21Q9UKT6 434 aa9.66□□□□□ -0.86
COPB1-210ENST00000533533 DUSP12Q9UNI6 340 aa9.66□□□□□ -0.86
COPB1-210ENST00000533533 FAN1Q9Y2M0 1017 aa9.66□□□□□ -0.86
COPB1-210ENST00000533533 ARID2Q68CP9 1835 aa9.66□□□□□ -0.86
COPB1-210ENST00000533533 ACACBO00763 2458 aa9.65□□□□□ -0.86
COPB1-210ENST00000533533 DNAH14Q0VDD8 3507 aa9.65□□□□□ -0.86
COPB1-210ENST00000533533 A0A087WWV3 80 aa9.65□□□□□ -0.86
COPB1-210ENST00000533533 C2CD2LO14523 706 aa9.65□□□□□ -0.86
COPB1-210ENST00000533533 NRP1O14786 923 aa9.65□□□□□ -0.86
COPB1-210ENST00000533533 SLITRK3O94933 977 aa9.65□□□□□ -0.86
COPB1-210ENST00000533533 POMCP01189 267 aa9.65□□□□□ -0.86
COPB1-210ENST00000533533 SOD2P04179 222 aa9.65□□□□□ -0.86
COPB1-210ENST00000533533 URODP06132 367 aa9.65□□□□□ -0.86
COPB1-210ENST00000533533 SRGAP2CP0DJJ0 459 aa9.65□□□□□ -0.86
COPB1-210ENST00000533533 YWHABP31946 246 aaKnown RBP9.65□□□□□ -0.86
COPB1-210ENST00000533533 CCT6AP40227 531 aaKnown RBP9.65□□□□□ -0.86
COPB1-210ENST00000533533 CEBPZQ03701 1054 aaKnown RBP9.65□□□□□ -0.86
COPB1-210ENST00000533533 SPIRE1Q08AE8 756 aa9.65□□□□□ -0.86
COPB1-210ENST00000533533 FOXD4L6Q3SYB3 417 aaPredicted RBP9.65□□□□□ -0.86
COPB1-210ENST00000533533 XKR9Q5GH70 373 aa9.65□□□□□ -0.86
COPB1-210ENST00000533533 UBXN11Q5T124 520 aa9.65□□□□□ -0.86
COPB1-210ENST00000533533 FAM173BQ6P4H8 233 aa9.65□□□□□ -0.86
COPB1-210ENST00000533533 FOXD4L3Q6VB84 417 aaPredicted RBP9.65□□□□□ -0.86
COPB1-210ENST00000533533 EXOC8Q8IYI6 725 aa9.65□□□□□ -0.86
COPB1-210ENST00000533533 SIX5Q8N196 739 aa9.65□□□□□ -0.86
COPB1-210ENST00000533533 PRPF31Q8WWY3 499 aaKnown RBP9.65□□□□□ -0.86
COPB1-210ENST00000533533 PSPC1Q8WXF1 523 aaKnown RBP9.65□□□□□ -0.86
COPB1-210ENST00000533533 TMEM143Q96AN5 459 aa9.65□□□□□ -0.86
COPB1-210ENST00000533533 PHF12Q96QT6 1004 aa9.65□□□□□ -0.86
COPB1-210ENST00000533533 RPS6KC1Q96S38 1066 aa9.65□□□□□ -0.86
COPB1-210ENST00000533533 DHX33Q9H6R0 707 aaKnown RBP9.65□□□□□ -0.86
COPB1-210ENST00000533533 MINDY3Q9H8M7 445 aa9.65□□□□□ -0.86
COPB1-210ENST00000533533 MAN1C1Q9NR34 630 aa9.65□□□□□ -0.86
COPB1-210ENST00000533533 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.65□□□□□ -0.86
COPB1-210ENST00000533533 WRAP73Q9P2S5 460 aaPredicted RBP9.65□□□□□ -0.86
COPB1-210ENST00000533533 LRWD1Q9UFC0 647 aa9.65□□□□□ -0.86
COPB1-210ENST00000533533 MTMR6Q9Y217 621 aa9.65□□□□□ -0.86
COPB1-210ENST00000533533 SSX2IPQ9Y2D8 614 aa9.65□□□□□ -0.86
COPB1-210ENST00000533533 PPME1Q9Y570 386 aa9.65□□□□□ -0.86
COPB1-210ENST00000533533 CCDC195A0A1B0GUA6 201 aa9.64□□□□□ -0.87
COPB1-210ENST00000533533 VWA3AA6NCI4 1184 aa9.64□□□□□ -0.87
COPB1-210ENST00000533533 LAD1O00515 517 aa9.64□□□□□ -0.87
COPB1-210ENST00000533533 ZBTB39O15060 712 aa9.64□□□□□ -0.87
COPB1-210ENST00000533533 TEX28O15482 410 aa9.64□□□□□ -0.87
COPB1-210ENST00000533533 N4BP1O75113 896 aaKnown RBP9.64□□□□□ -0.87
COPB1-210ENST00000533533 ADH1AP07327 375 aa9.64□□□□□ -0.87
COPB1-210ENST00000533533 NCLP19338 710 aaKnown RBP9.64□□□□□ -0.87
COPB1-210ENST00000533533 RFC5P40937 340 aa9.64□□□□□ -0.87
COPB1-210ENST00000533533 LAMTOR4Q0VGL1 99 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms