RNA–Protein interactions for RNA: ENST00000531110.5

CD44-231, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-231ENST00000531110 MATN2O00339 956 aa6.48□□□□□ -1.37
CD44-231ENST00000531110 SLC26A4O43511 780 aa6.48□□□□□ -1.37
CD44-231ENST00000531110 CR2P20023 1033 aa6.48□□□□□ -1.37
CD44-231ENST00000531110 RPS19P39019 145 aaKnown RBP6.48□□□□□ -1.37
CD44-231ENST00000531110 CDKN1CP49918 316 aaPredicted RBP6.48□□□□□ -1.37
CD44-231ENST00000531110 ICA1Q05084 483 aa6.48□□□□□ -1.37
CD44-231ENST00000531110 KLF1Q13351 362 aaPredicted RBP6.48□□□□□ -1.37
CD44-231ENST00000531110 ADAM15Q13444 863 aa6.48□□□□□ -1.37
CD44-231ENST00000531110 UGT8Q16880 541 aa6.48□□□□□ -1.37
CD44-231ENST00000531110 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.48□□□□□ -1.37
CD44-231ENST00000531110 ANO4Q32M45 955 aa6.48□□□□□ -1.37
CD44-231ENST00000531110 ZKSCAN2Q63HK3 967 aa6.48□□□□□ -1.37
CD44-231ENST00000531110 CCDC62Q6P9F0 684 aa6.48□□□□□ -1.37
CD44-231ENST00000531110 CIR1Q86X95 450 aaPredicted RBP6.48□□□□□ -1.37
CD44-231ENST00000531110 SAMD3Q8N6K7 520 aa6.48□□□□□ -1.37
CD44-231ENST00000531110 DNERQ8NFT8 737 aa6.48□□□□□ -1.37
CD44-231ENST00000531110 RMDN2Q96LZ7 410 aa6.48□□□□□ -1.37
CD44-231ENST00000531110 TYW1Q9NV66 732 aaKnown RBP6.48□□□□□ -1.37
CD44-231ENST00000531110 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.48□□□□□ -1.37
CD44-231ENST00000531110 UTP6Q9NYH9 597 aaKnown RBP6.48□□□□□ -1.37
CD44-231ENST00000531110 FAM184BQ9ULE4 1060 aa6.48□□□□□ -1.37
CD44-231ENST00000531110 SLC30A1Q9Y6M5 507 aa6.48□□□□□ -1.37
CD44-231ENST00000531110 NPC1L1Q9UHC9 1359 aa6.47□□□□□ -1.37
CD44-231ENST00000531110 FOXD2O60548 495 aaPredicted RBP6.47□□□□□ -1.37
CD44-231ENST00000531110 BAG4O95429 457 aaKnown RBP6.47□□□□□ -1.37
CD44-231ENST00000531110 JUNP05412 331 aaKnown RBP6.47□□□□□ -1.37
CD44-231ENST00000531110 PPARAQ07869 468 aa6.47□□□□□ -1.37
CD44-231ENST00000531110 DUSP8Q13202 625 aa6.47□□□□□ -1.37
CD44-231ENST00000531110 TCIRG1Q13488 830 aa6.47□□□□□ -1.37
CD44-231ENST00000531110 INAVAQ3KP66 663 aa6.47□□□□□ -1.37
CD44-231ENST00000531110 APBB1IPQ7Z5R6 666 aaPredicted RBP6.47□□□□□ -1.37
CD44-231ENST00000531110 FMNL3Q8IVF7 1028 aa6.47□□□□□ -1.37
CD44-231ENST00000531110 CNTD1Q8N815 330 aa6.47□□□□□ -1.37
CD44-231ENST00000531110 PLA2G15Q8NCC3 412 aa6.47□□□□□ -1.37
CD44-231ENST00000531110 HDAC7Q8WUI4 952 aa6.47□□□□□ -1.37
CD44-231ENST00000531110 ANKRD7Q92527 254 aa6.47□□□□□ -1.37
CD44-231ENST00000531110 CFAP53Q96M91 514 aa6.47□□□□□ -1.37
CD44-231ENST00000531110 KCTD10Q9H3F6 313 aa6.47□□□□□ -1.37
CD44-231ENST00000531110 VTA1Q9NP79 307 aa6.47□□□□□ -1.37
CD44-231ENST00000531110 TRPV5Q9NQA5 729 aa6.47□□□□□ -1.37
CD44-231ENST00000531110 C14orf119Q9NWQ9 140 aa6.47□□□□□ -1.37
CD44-231ENST00000531110 DNAI1Q9UI46 699 aa6.47□□□□□ -1.37
CD44-231ENST00000531110 MORC2Q9Y6X9 1032 aaPredicted RBP6.47□□□□□ -1.37
CD44-231ENST00000531110 ARHGAP31Q2M1Z3 1444 aa6.47□□□□□ -1.37
CD44-231ENST00000531110 RSF1Q96T23 1441 aaPredicted RBP6.47□□□□□ -1.37
CD44-231ENST00000531110 BICDL2A1A5D9 508 aa6.46□□□□□ -1.38
CD44-231ENST00000531110 C2orf78A6NCI8 922 aa6.46□□□□□ -1.38
CD44-231ENST00000531110 GOLGA8AA7E2F4 631 aa6.46□□□□□ -1.38
CD44-231ENST00000531110 GOLGA8BA8MQT2 603 aa6.46□□□□□ -1.38
CD44-231ENST00000531110 PATE3B3GLJ2 98 aa6.46□□□□□ -1.38
CD44-231ENST00000531110 CELA3BP08861 270 aa6.46□□□□□ -1.38
CD44-231ENST00000531110 VSIG10L2P0DP72 767 aa6.46□□□□□ -1.38
CD44-231ENST00000531110 GAAP10253 952 aa6.46□□□□□ -1.38
CD44-231ENST00000531110 PTPRGP23470 1445 aa6.46□□□□□ -1.38
CD44-231ENST00000531110 KIR2DL3P43628 341 aa6.46□□□□□ -1.38
CD44-231ENST00000531110 GPR3P46089 330 aa6.46□□□□□ -1.38
CD44-231ENST00000531110 GUCY2FP51841 1108 aa6.46□□□□□ -1.38
CD44-231ENST00000531110 WNT3AP56704 352 aa6.46□□□□□ -1.38
CD44-231ENST00000531110 RWDD2BP57060 319 aa6.46□□□□□ -1.38
CD44-231ENST00000531110 ADAM8P78325 824 aa6.46□□□□□ -1.38
CD44-231ENST00000531110 TRIM25Q14258 630 aaKnown RBP6.46□□□□□ -1.38
CD44-231ENST00000531110 SYDE2Q5VT97 1194 aa6.46□□□□□ -1.38
CD44-231ENST00000531110 TTLL5Q6EMB2 1281 aa6.46□□□□□ -1.38
CD44-231ENST00000531110 LMBR1LQ6UX01 489 aa6.46□□□□□ -1.38
CD44-231ENST00000531110 OTUD6AQ7L8S5 288 aa6.46□□□□□ -1.38
CD44-231ENST00000531110 KCNK18Q7Z418 384 aa6.46□□□□□ -1.38
CD44-231ENST00000531110 CATIPQ7Z7H3 387 aa6.46□□□□□ -1.38
CD44-231ENST00000531110 EFCAB13Q8IY85 973 aa6.46□□□□□ -1.38
CD44-231ENST00000531110 MORC4Q8TE76 937 aa6.46□□□□□ -1.38
CD44-231ENST00000531110 COG1Q8WTW3 980 aa6.46□□□□□ -1.38
CD44-231ENST00000531110 AUTS2Q8WXX7 1259 aa6.46□□□□□ -1.38
CD44-231ENST00000531110 GPATCH3Q96I76 525 aa6.46□□□□□ -1.38
CD44-231ENST00000531110 LZTS2Q9BRK4 669 aa6.46□□□□□ -1.38
CD44-231ENST00000531110 FDXACB1Q9BRP7 624 aaPredicted RBP6.46□□□□□ -1.38
CD44-231ENST00000531110 BDH2Q9BUT1 245 aa6.46□□□□□ -1.38
CD44-231ENST00000531110 A1CFQ9NQ94 594 aaKnown RBP6.46□□□□□ -1.38
CD44-231ENST00000531110 STK26Q9P289 416 aa6.46□□□□□ -1.38
CD44-231ENST00000531110 RSPH14Q9UHP6 348 aa6.46□□□□□ -1.38
CD44-231ENST00000531110 EVLQ9UI08 416 aaPredicted RBP6.46□□□□□ -1.38
CD44-231ENST00000531110 YEATS2Q9ULM3 1422 aa6.46□□□□□ -1.38
CD44-231ENST00000531110 USP18Q9UMW8 372 aa6.46□□□□□ -1.38
CD44-231ENST00000531110 JRKLQ9Y4A0 524 aa6.46□□□□□ -1.38
CD44-231ENST00000531110 A0A1B0GUL7 405 aa6.45□□□□□ -1.38
CD44-231ENST00000531110 A0A1W2PR48 441 aa6.45□□□□□ -1.38
CD44-231ENST00000531110 K7ESM1 405 aa6.45□□□□□ -1.38
CD44-231ENST00000531110 NRP1O14786 923 aa6.45□□□□□ -1.38
CD44-231ENST00000531110 GPR42O15529 346 aa6.45□□□□□ -1.38
CD44-231ENST00000531110 EPB41L2O43491 1005 aaKnown RBP6.45□□□□□ -1.38
CD44-231ENST00000531110 HTATSF1O43719 755 aaKnown RBP6.45□□□□□ -1.38
CD44-231ENST00000531110 RAD17O75943 681 aa6.45□□□□□ -1.38
CD44-231ENST00000531110 LY86O95711 162 aa6.45□□□□□ -1.38
CD44-231ENST00000531110 CFBP00751 764 aa6.45□□□□□ -1.38
CD44-231ENST00000531110 CLEC2LP0C7M8 214 aa6.45□□□□□ -1.38
CD44-231ENST00000531110 NEXNQ0ZGT2 675 aa6.45□□□□□ -1.38
CD44-231ENST00000531110 EFEMP1Q12805 493 aa6.45□□□□□ -1.38
CD44-231ENST00000531110 PDIA5Q14554 519 aa6.45□□□□□ -1.38
CD44-231ENST00000531110 CT83Q5H943 113 aa6.45□□□□□ -1.38
CD44-231ENST00000531110 TAS1R1Q7RTX1 841 aa6.45□□□□□ -1.38
CD44-231ENST00000531110 MIGA1Q8NAN2 632 aa6.45□□□□□ -1.38
CD44-231ENST00000531110 OR14K1Q8NGZ2 314 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms