RNA–Protein interactions for RNA: ENST00000529745.5

CCDC90B-215, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-215ENST00000529745 ODF2LQ9ULJ1 636 aa17.03■□□□□ 0.32
CCDC90B-215ENST00000529745 HES2Q9Y543 173 aa17.03■□□□□ 0.32
CCDC90B-215ENST00000529745 NT5C1B-RDH14C9J2C7 533 aa17.02■□□□□ 0.32
CCDC90B-215ENST00000529745 K7ERI5 159 aa17.02■□□□□ 0.32
CCDC90B-215ENST00000529745 GLP2RO95838 553 aa17.02■□□□□ 0.32
CCDC90B-215ENST00000529745 EFEMP2O95967 443 aa17.02■□□□□ 0.32
CCDC90B-215ENST00000529745 ALDH2P05091 517 aa17.02■□□□□ 0.32
CCDC90B-215ENST00000529745 MLH1P40692 756 aa17.02■□□□□ 0.32
CCDC90B-215ENST00000529745 NRIP1P48552 1158 aa17.02■□□□□ 0.32
CCDC90B-215ENST00000529745 DMP1Q13316 513 aaPredicted RBP17.02■□□□□ 0.32
CCDC90B-215ENST00000529745 DCAF4L1Q3SXM0 396 aa17.02■□□□□ 0.32
CCDC90B-215ENST00000529745 ARSHQ5FYA8 562 aa17.02■□□□□ 0.32
CCDC90B-215ENST00000529745 NT5DC1Q5TFE4 455 aa17.02■□□□□ 0.32
CCDC90B-215ENST00000529745 TAS1R3Q7RTX0 852 aa17.02■□□□□ 0.32
CCDC90B-215ENST00000529745 TMEM173Q86WV6 379 aaPredicted RBP17.02■□□□□ 0.32
CCDC90B-215ENST00000529745 CDR2LQ86X02 465 aaPredicted RBP17.02■□□□□ 0.32
CCDC90B-215ENST00000529745 COLGALT2Q8IYK4 626 aa17.02■□□□□ 0.32
CCDC90B-215ENST00000529745 LRRC15Q8TF66 581 aa17.02■□□□□ 0.32
CCDC90B-215ENST00000529745 GAD1Q99259 594 aa17.02■□□□□ 0.32
CCDC90B-215ENST00000529745 TCF25Q9BQ70 676 aa17.02■□□□□ 0.32
CCDC90B-215ENST00000529745 ADPGKQ9BRR6 497 aa17.02■□□□□ 0.32
CCDC90B-215ENST00000529745 KIFC3Q9BVG8 833 aa17.02■□□□□ 0.32
CCDC90B-215ENST00000529745 TLE6Q9H808 572 aa17.02■□□□□ 0.32
CCDC90B-215ENST00000529745 POLD4Q9HCU8 107 aa17.02■□□□□ 0.32
CCDC90B-215ENST00000529745 MIOSQ9NXC5 875 aa17.02■□□□□ 0.32
CCDC90B-215ENST00000529745 TNFSF13BQ9Y275 285 aa17.02■□□□□ 0.32
CCDC90B-215ENST00000529745 PCDHGC5Q9Y5F6 944 aa17.02■□□□□ 0.32
CCDC90B-215ENST00000529745 LINC01565O15544 149 aa17.01■□□□□ 0.31
CCDC90B-215ENST00000529745 POMCP01189 267 aa17.01■□□□□ 0.31
CCDC90B-215ENST00000529745 CTSAP10619 480 aa17.01■□□□□ 0.31
CCDC90B-215ENST00000529745 PLS3P13797 630 aa17.01■□□□□ 0.31
CCDC90B-215ENST00000529745 SCP2P22307 547 aa17.01■□□□□ 0.31
CCDC90B-215ENST00000529745 NASPP49321 788 aaPredicted RBP17.01■□□□□ 0.31
CCDC90B-215ENST00000529745 DLX2Q07687 328 aaPredicted RBP17.01■□□□□ 0.31
CCDC90B-215ENST00000529745 GRIK3Q13003 919 aa17.01■□□□□ 0.31
CCDC90B-215ENST00000529745 COASYQ13057 564 aa17.01■□□□□ 0.31
CCDC90B-215ENST00000529745 GIT2Q14161 759 aa17.01■□□□□ 0.31
CCDC90B-215ENST00000529745 SMC1AQ14683 1233 aaKnown RBP17.01■□□□□ 0.31
CCDC90B-215ENST00000529745 SLC39A14Q15043 492 aa17.01■□□□□ 0.31
CCDC90B-215ENST00000529745 PTCRAQ6ISU1 281 aaPredicted RBP17.01■□□□□ 0.31
CCDC90B-215ENST00000529745 FAM173BQ6P4H8 233 aa17.01■□□□□ 0.31
CCDC90B-215ENST00000529745 TMC7Q7Z402 723 aa17.01■□□□□ 0.31
CCDC90B-215ENST00000529745 RNF168Q8IYW5 571 aaPredicted RBP17.01■□□□□ 0.31
CCDC90B-215ENST00000529745 MRPL43Q8N983 215 aaKnown RBP17.01■□□□□ 0.31
CCDC90B-215ENST00000529745 MICAL1Q8TDZ2 1067 aa17.01■□□□□ 0.31
CCDC90B-215ENST00000529745 BCL7CQ8WUZ0 217 aaPredicted RBP17.01■□□□□ 0.31
CCDC90B-215ENST00000529745 ZFP42Q96MM3 310 aa17.01■□□□□ 0.31
CCDC90B-215ENST00000529745 FAM193BQ96PV7 902 aaPredicted RBP17.01■□□□□ 0.31
CCDC90B-215ENST00000529745 USP28Q96RU2 1077 aa17.01■□□□□ 0.31
CCDC90B-215ENST00000529745 PTPRHQ9HD43 1115 aa17.01■□□□□ 0.31
CCDC90B-215ENST00000529745 KMT5AQ9NQR1 393 aa17.01■□□□□ 0.31
CCDC90B-215ENST00000529745 ENTPD7Q9NQZ7 604 aa17.01■□□□□ 0.31
CCDC90B-215ENST00000529745 FOXD4L1Q9NU39 408 aa17.01■□□□□ 0.31
CCDC90B-215ENST00000529745 CLEC1BQ9P126 229 aa17.01■□□□□ 0.31
CCDC90B-215ENST00000529745 FAM50BQ9Y247 325 aa17.01■□□□□ 0.31
CCDC90B-215ENST00000529745 FAN1Q9Y2M0 1017 aa17.01■□□□□ 0.31
CCDC90B-215ENST00000529745 H3BQ06 376 aaPredicted RBP17■□□□□ 0.31
CCDC90B-215ENST00000529745 NRP1O14786 923 aa17■□□□□ 0.31
CCDC90B-215ENST00000529745 PLCG1P19174 1290 aa17■□□□□ 0.31
CCDC90B-215ENST00000529745 PROZP22891 400 aa17■□□□□ 0.31
CCDC90B-215ENST00000529745 SCNN1GP51170 649 aa17■□□□□ 0.31
CCDC90B-215ENST00000529745 ZNF131P52739 623 aa17■□□□□ 0.31
CCDC90B-215ENST00000529745 BMS1Q14692 1282 aaKnown RBP17■□□□□ 0.31
CCDC90B-215ENST00000529745 ZRSR1Q15695 479 aaKnown RBP17■□□□□ 0.31
CCDC90B-215ENST00000529745 ATF7IP2Q5U623 682 aa17■□□□□ 0.31
CCDC90B-215ENST00000529745 PLPP4Q5VZY2 271 aa17■□□□□ 0.31
CCDC90B-215ENST00000529745 EEF1DP3Q658K8 133 aa17■□□□□ 0.31
CCDC90B-215ENST00000529745 APBB1IPQ7Z5R6 666 aaPredicted RBP17■□□□□ 0.31
CCDC90B-215ENST00000529745 RAD54LQ92698 747 aa17■□□□□ 0.31
CCDC90B-215ENST00000529745 FBXL18Q96ME1 805 aa17■□□□□ 0.31
CCDC90B-215ENST00000529745 PLIN2Q99541 437 aa17■□□□□ 0.31
CCDC90B-215ENST00000529745 ACO2Q99798 780 aaKnown RBP17■□□□□ 0.31
CCDC90B-215ENST00000529745 GBP3Q9H0R5 595 aa17■□□□□ 0.31
CCDC90B-215ENST00000529745 IGFLR1Q9H665 355 aa17■□□□□ 0.31
CCDC90B-215ENST00000529745 LARSQ9P2J5 1176 aaKnown RBP17■□□□□ 0.31
CCDC90B-215ENST00000529745 STK17AQ9UEE5 414 aa17■□□□□ 0.31
CCDC90B-215ENST00000529745 PRKAG3Q9UGI9 489 aa17■□□□□ 0.31
CCDC90B-215ENST00000529745 C2orf71A6NGG8 1288 aa16.99■□□□□ 0.31
CCDC90B-215ENST00000529745 CCDC169A6NNP5 214 aa16.99■□□□□ 0.31
CCDC90B-215ENST00000529745 HIDE1A8MVS5 230 aa16.99■□□□□ 0.31
CCDC90B-215ENST00000529745 H0YCG3 227 aa16.99■□□□□ 0.31
CCDC90B-215ENST00000529745 MBTPS2O43462 519 aa16.99■□□□□ 0.31
CCDC90B-215ENST00000529745 BRD1O95696 1058 aa16.99■□□□□ 0.31
CCDC90B-215ENST00000529745 AKAP5P24588 427 aa16.99■□□□□ 0.31
CCDC90B-215ENST00000529745 NCKAP1LP55160 1127 aa16.99■□□□□ 0.31
CCDC90B-215ENST00000529745 SMAD4Q13485 552 aaKnown RBP16.99■□□□□ 0.31
CCDC90B-215ENST00000529745 KARSQ15046 597 aaKnown RBP16.99■□□□□ 0.31
CCDC90B-215ENST00000529745 SMAD2Q15796 467 aaKnown RBP16.99■□□□□ 0.31
CCDC90B-215ENST00000529745 FAM178BQ8IXR5 827 aa16.99■□□□□ 0.31
CCDC90B-215ENST00000529745 VPS52Q8N1B4 723 aa16.99■□□□□ 0.31
CCDC90B-215ENST00000529745 SMRP1Q8NCR6 262 aa16.99■□□□□ 0.31
CCDC90B-215ENST00000529745 TMEM161BQ8NDZ6 487 aa16.99■□□□□ 0.31
CCDC90B-215ENST00000529745 VN1R2Q8NFZ6 395 aa16.99■□□□□ 0.31
CCDC90B-215ENST00000529745 LARP4BQ92615 738 aaKnown RBP16.99■□□□□ 0.31
CCDC90B-215ENST00000529745 VN1R3Q9BXE9 311 aa16.99■□□□□ 0.31
CCDC90B-215ENST00000529745 MRPL4Q9BYD3 311 aaKnown RBP16.99■□□□□ 0.31
CCDC90B-215ENST00000529745 KCNH6Q9H252 994 aa16.99■□□□□ 0.31
CCDC90B-215ENST00000529745 MARCH5Q9NX47 278 aa16.99■□□□□ 0.31
CCDC90B-215ENST00000529745 CD207Q9UJ71 328 aa16.99■□□□□ 0.31
CCDC90B-215ENST00000529745 MTCL1Q9Y4B5 1905 aaKnown RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms