RNA–Protein interactions for RNA: ENST00000527442.5

PKP3-205, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-205ENST00000527442 CWF19L1Q69YN2 538 aaKnown RBP23.2■■□□□ 1.3
PKP3-205ENST00000527442 MIER3Q7Z3K6 550 aa23.2■■□□□ 1.3
PKP3-205ENST00000527442 FRMD5Q7Z6J6 570 aa23.2■■□□□ 1.3
PKP3-205ENST00000527442 SLC22A17Q8WUG5 538 aa23.2■■□□□ 1.3
PKP3-205ENST00000527442 CALML4Q96GE6 196 aa23.2■■□□□ 1.3
PKP3-205ENST00000527442 POLR3CQ9BUI4 534 aaPredicted RBP23.2■■□□□ 1.3
PKP3-205ENST00000527442 MFSD1Q9H3U5 465 aa23.2■■□□□ 1.3
PKP3-205ENST00000527442 TUFT1Q9NNX1 390 aa23.2■■□□□ 1.3
PKP3-205ENST00000527442 DACT1Q9NYF0 836 aa23.2■■□□□ 1.3
PKP3-205ENST00000527442 USTQ9Y2C2 406 aa23.2■■□□□ 1.3
PKP3-205ENST00000527442 RPA1P27694 616 aa23.19■■□□□ 1.3
PKP3-205ENST00000527442 BMS1Q14692 1282 aaKnown RBP23.19■■□□□ 1.3
PKP3-205ENST00000527442 KARSQ15046 597 aaKnown RBP23.19■■□□□ 1.3
PKP3-205ENST00000527442 E2F4Q16254 413 aa23.19■■□□□ 1.3
PKP3-205ENST00000527442 LONRF3Q496Y0 759 aa23.19■■□□□ 1.3
PKP3-205ENST00000527442 TMEM119Q4V9L6 283 aa23.19■■□□□ 1.3
PKP3-205ENST00000527442 PLCD3Q8N3E9 789 aa23.19■■□□□ 1.3
PKP3-205ENST00000527442 KCTD17Q8N5Z5 321 aa23.19■■□□□ 1.3
PKP3-205ENST00000527442 LPPQ93052 612 aa23.19■■□□□ 1.3
PKP3-205ENST00000527442 TIGD1Q96MW7 591 aa23.19■■□□□ 1.3
PKP3-205ENST00000527442 HSD17B14Q9BPX1 270 aa23.19■■□□□ 1.3
PKP3-205ENST00000527442 EIF2AK1Q9BQI3 630 aaKnown RBP23.19■■□□□ 1.3
PKP3-205ENST00000527442 NT5C3AQ9H0P0 336 aa23.19■■□□□ 1.3
PKP3-205ENST00000527442 NRBP2Q9NSY0 501 aa23.19■■□□□ 1.3
PKP3-205ENST00000527442 USP25Q9UHP3 1055 aa23.19■■□□□ 1.3
PKP3-205ENST00000527442 IRAK3Q9Y616 596 aa23.19■■□□□ 1.3
PKP3-205ENST00000527442 ZNF202O95125 648 aa23.18■■□□□ 1.3
PKP3-205ENST00000527442 CTSAP10619 480 aa23.18■■□□□ 1.3
PKP3-205ENST00000527442 CCT6AP40227 531 aaKnown RBP23.18■■□□□ 1.3
PKP3-205ENST00000527442 PHKA2P46019 1235 aa23.18■■□□□ 1.3
PKP3-205ENST00000527442 CLCN5P51795 746 aa23.18■■□□□ 1.3
PKP3-205ENST00000527442 POLGP54098 1239 aaPredicted RBP23.18■■□□□ 1.3
PKP3-205ENST00000527442 FOXK2Q01167 660 aa23.18■■□□□ 1.3
PKP3-205ENST00000527442 TBC1D8BQ0IIM8 1120 aa23.18■■□□□ 1.3
PKP3-205ENST00000527442 TMC5Q6UXY8 1006 aa23.18■■□□□ 1.3
PKP3-205ENST00000527442 IGSF21Q96ID5 467 aa23.18■■□□□ 1.3
PKP3-205ENST00000527442 PNMA5Q96PV4 448 aa23.18■■□□□ 1.3
PKP3-205ENST00000527442 MEIS3P2A8K0S8 358 aa23.17■■□□□ 1.3
PKP3-205ENST00000527442 POLR2DO15514 142 aaKnown RBP23.17■■□□□ 1.3
PKP3-205ENST00000527442 KINO60870 393 aaKnown RBP23.17■■□□□ 1.3
PKP3-205ENST00000527442 MED24O75448 989 aa23.17■■□□□ 1.3
PKP3-205ENST00000527442 SPATA31C1P0DKV0 1188 aa23.17■■□□□ 1.3
PKP3-205ENST00000527442 PLCG1P19174 1290 aa23.17■■□□□ 1.3
PKP3-205ENST00000527442 TARBP2Q15633 366 aaKnown RBP23.17■■□□□ 1.3
PKP3-205ENST00000527442 DDX53Q86TM3 631 aaKnown RBP23.17■■□□□ 1.3
PKP3-205ENST00000527442 PDILTQ8N807 584 aa23.17■■□□□ 1.3
PKP3-205ENST00000527442 IQUBQ8NA54 791 aa23.17■■□□□ 1.3
PKP3-205ENST00000527442 FLCNQ8NFG4 579 aa23.17■■□□□ 1.3
PKP3-205ENST00000527442 RASSF8Q8NHQ8 419 aa23.17■■□□□ 1.3
PKP3-205ENST00000527442 CDK5RAP3Q96JB5 506 aa23.17■■□□□ 1.3
PKP3-205ENST00000527442 VN1R3Q9BXE9 311 aa23.17■■□□□ 1.3
PKP3-205ENST00000527442 CUEDC2Q9H467 287 aa23.17■■□□□ 1.3
PKP3-205ENST00000527442 NRDE2Q9H7Z3 1164 aa23.17■■□□□ 1.3
PKP3-205ENST00000527442 CYP26B1Q9NR63 512 aa23.17■■□□□ 1.3
PKP3-205ENST00000527442 TBC1D13Q9NVG8 400 aa23.17■■□□□ 1.3
PKP3-205ENST00000527442 STK17AQ9UEE5 414 aa23.17■■□□□ 1.3
PKP3-205ENST00000527442 GVINP1Q7Z2Y8 2422 aa23.16■■□□□ 1.3
PKP3-205ENST00000527442 ACTN4O43707 911 aaKnown RBP23.16■■□□□ 1.3
PKP3-205ENST00000527442 B4GALT3O60512 393 aa23.16■■□□□ 1.3
PKP3-205ENST00000527442 CATSPER3Q86XQ3 398 aa23.16■■□□□ 1.3
PKP3-205ENST00000527442 NKD2Q969F2 451 aaPredicted RBP23.16■■□□□ 1.3
PKP3-205ENST00000527442 GCOM2Q9BZD3 368 aaPredicted RBP23.16■■□□□ 1.3
PKP3-205ENST00000527442 MAGEF1Q9HAY2 307 aa23.16■■□□□ 1.3
PKP3-205ENST00000527442 CHST12Q9NRB3 414 aa23.16■■□□□ 1.3
PKP3-205ENST00000527442 DNAJB4Q9UDY4 337 aa23.16■■□□□ 1.3
PKP3-205ENST00000527442 INPP5FQ9Y2H2 1132 aa23.16■■□□□ 1.3
PKP3-205ENST00000527442 ARID2Q68CP9 1835 aa23.15■■□□□ 1.3
PKP3-205ENST00000527442 A0A087WZ62 844 aa23.15■■□□□ 1.3
PKP3-205ENST00000527442 TMEM150BA6NC51 233 aa23.15■■□□□ 1.3
PKP3-205ENST00000527442 P4HBP07237 508 aaKnown RBP23.15■■□□□ 1.3
PKP3-205ENST00000527442 GALTP07902 379 aa23.15■■□□□ 1.3
PKP3-205ENST00000527442 STAT6P42226 847 aa23.15■■□□□ 1.3
PKP3-205ENST00000527442 GIT2Q14161 759 aa23.15■■□□□ 1.3
PKP3-205ENST00000527442 PTPN14Q15678 1187 aa23.15■■□□□ 1.3
PKP3-205ENST00000527442 ECM1Q16610 540 aa23.15■■□□□ 1.3
PKP3-205ENST00000527442 MTERF2Q49AM1 385 aa23.15■■□□□ 1.3
PKP3-205ENST00000527442 RRAGBQ5VZM2 374 aa23.15■■□□□ 1.3
PKP3-205ENST00000527442 TWF2Q6IBS0 349 aaKnown RBP23.15■■□□□ 1.3
PKP3-205ENST00000527442 KRBA2Q6ZNG9 492 aa23.15■■□□□ 1.3
PKP3-205ENST00000527442 ELOA2Q8IYF1 753 aaPredicted RBP23.15■■□□□ 1.3
PKP3-205ENST00000527442 SYAP1Q96A49 352 aaPredicted RBP23.15■■□□□ 1.3
PKP3-205ENST00000527442 DHX58Q96C10 678 aa23.15■■□□□ 1.3
PKP3-205ENST00000527442 DYDC2Q96IM9 177 aa23.15■■□□□ 1.3
PKP3-205ENST00000527442 FDXACB1Q9BRP7 624 aaPredicted RBP23.15■■□□□ 1.3
PKP3-205ENST00000527442 TRAIPQ9BWF2 469 aa23.15■■□□□ 1.3
PKP3-205ENST00000527442 SFXN1Q9H9B4 322 aa23.15■■□□□ 1.3
PKP3-205ENST00000527442 SEPT9Q9UHD8 586 aaPredicted RBP23.15■■□□□ 1.3
PKP3-205ENST00000527442 PIN4Q9Y237 131 aaKnown RBP23.15■■□□□ 1.3
PKP3-205ENST00000527442 PI15O43692 258 aa23.14■■□□□ 1.29
PKP3-205ENST00000527442 SLITRK3O94933 977 aa23.14■■□□□ 1.29
PKP3-205ENST00000527442 LYPLA2O95372 231 aa23.14■■□□□ 1.29
PKP3-205ENST00000527442 SLFN14P0C7P3 912 aa23.14■■□□□ 1.29
PKP3-205ENST00000527442 NPR3P17342 541 aa23.14■■□□□ 1.29
PKP3-205ENST00000527442 AOC1P19801 751 aa23.14■■□□□ 1.29
PKP3-205ENST00000527442 SLC11A1P49279 550 aa23.14■■□□□ 1.29
PKP3-205ENST00000527442 CYP4A11Q02928 519 aa23.14■■□□□ 1.29
PKP3-205ENST00000527442 NOMO2Q5JPE7 1267 aa23.14■■□□□ 1.29
PKP3-205ENST00000527442 GLB1LQ6UWU2 654 aa23.14■■□□□ 1.29
PKP3-205ENST00000527442 CCDC149Q6ZUS6 474 aa23.14■■□□□ 1.29
PKP3-205ENST00000527442 GPR149Q86SP6 731 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms