RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 PCDHA13Q9Y5I0 950 aa5.97□□□□□ -1.45
USP47-206ENST00000525367 PRAMEF4O60810 478 aa5.96□□□□□ -1.46
USP47-206ENST00000525367 CTSSP25774 331 aa5.96□□□□□ -1.46
USP47-206ENST00000525367 RPL13P26373 211 aaKnown RBP5.96□□□□□ -1.46
USP47-206ENST00000525367 POLD1P28340 1107 aa5.96□□□□□ -1.46
USP47-206ENST00000525367 ADSLP30566 484 aaPredicted RBP5.96□□□□□ -1.46
USP47-206ENST00000525367 HALP42357 657 aa5.96□□□□□ -1.46
USP47-206ENST00000525367 AK2P54819 239 aa5.96□□□□□ -1.46
USP47-206ENST00000525367 NRG3P56975 720 aa5.96□□□□□ -1.46
USP47-206ENST00000525367 EIF4HQ15056 248 aaKnown RBP5.96□□□□□ -1.46
USP47-206ENST00000525367 LLGL1Q15334 1064 aa5.96□□□□□ -1.46
USP47-206ENST00000525367 VMACQ2NL98 169 aa5.96□□□□□ -1.46
USP47-206ENST00000525367 OVCH2Q7RTZ1 564 aa5.96□□□□□ -1.46
USP47-206ENST00000525367 SAPCD2Q86UD0 394 aa5.96□□□□□ -1.46
USP47-206ENST00000525367 FAM186BQ8IYM0 893 aa5.96□□□□□ -1.46
USP47-206ENST00000525367 ZDHHC14Q8IZN3 488 aa5.96□□□□□ -1.46
USP47-206ENST00000525367 MARCH10Q8NA82 808 aaPredicted RBP5.96□□□□□ -1.46
USP47-206ENST00000525367 HOXB13Q92826 284 aaPredicted RBP5.96□□□□□ -1.46
USP47-206ENST00000525367 L2HGDHQ9H9P8 463 aa5.96□□□□□ -1.46
USP47-206ENST00000525367 ZNF69Q9UC07 566 aa5.96□□□□□ -1.46
USP47-206ENST00000525367 DMTF1Q9Y222 760 aa5.96□□□□□ -1.46
USP47-206ENST00000525367 LRRC14BA6NHZ5 514 aa5.95□□□□□ -1.46
USP47-206ENST00000525367 WNT10BO00744 389 aa5.95□□□□□ -1.46
USP47-206ENST00000525367 FFAR3O14843 346 aa5.95□□□□□ -1.46
USP47-206ENST00000525367 NRP2O60462 931 aa5.95□□□□□ -1.46
USP47-206ENST00000525367 CTNND1O60716 968 aaKnown RBP5.95□□□□□ -1.46
USP47-206ENST00000525367 ALDH2P05091 517 aa5.95□□□□□ -1.46
USP47-206ENST00000525367 C1QTNF9P0C862 333 aa5.95□□□□□ -1.46
USP47-206ENST00000525367 GLDCP23378 1020 aa5.95□□□□□ -1.46
USP47-206ENST00000525367 SERPINB3P29508 390 aa5.95□□□□□ -1.46
USP47-206ENST00000525367 ETV4P43268 484 aa5.95□□□□□ -1.46
USP47-206ENST00000525367 SLC6A9P48067 706 aa5.95□□□□□ -1.46
USP47-206ENST00000525367 USP14P54578 494 aa5.95□□□□□ -1.46
USP47-206ENST00000525367 KRT72Q14CN4 511 aa5.95□□□□□ -1.46
USP47-206ENST00000525367 PCOLCEQ15113 449 aa5.95□□□□□ -1.46
USP47-206ENST00000525367 UBE3CQ15386 1083 aa5.95□□□□□ -1.46
USP47-206ENST00000525367 CCDC178Q5BJE1 867 aa5.95□□□□□ -1.46
USP47-206ENST00000525367 ZNF648Q5T619 568 aaPredicted RBP5.95□□□□□ -1.46
USP47-206ENST00000525367 TRIM68Q6AZZ1 485 aa5.95□□□□□ -1.46
USP47-206ENST00000525367 MCTP2Q6DN12 878 aa5.95□□□□□ -1.46
USP47-206ENST00000525367 CYB5RLQ6IPT4 315 aa5.95□□□□□ -1.46
USP47-206ENST00000525367 Q6ZVL8 140 aa5.95□□□□□ -1.46
USP47-206ENST00000525367 SRLQ86TD4 932 aa5.95□□□□□ -1.46
USP47-206ENST00000525367 FBXO18Q8NFZ0 1043 aa5.95□□□□□ -1.46
USP47-206ENST00000525367 YTHDC1Q96MU7 727 aaKnown RBP5.95□□□□□ -1.46
USP47-206ENST00000525367 MAP3K14Q99558 947 aa5.95□□□□□ -1.46
USP47-206ENST00000525367 MYD88Q99836 296 aa5.95□□□□□ -1.46
USP47-206ENST00000525367 FAM204AQ9H8W3 233 aa5.95□□□□□ -1.46
USP47-206ENST00000525367 MAP3K20Q9NYL2 800 aaKnown RBP5.95□□□□□ -1.46
USP47-206ENST00000525367 LUZP4Q9P127 313 aa5.95□□□□□ -1.46
USP47-206ENST00000525367 SIK3Q9Y2K2 1263 aa5.95□□□□□ -1.46
USP47-206ENST00000525367 KCTD3Q9Y597 815 aa5.95□□□□□ -1.46
USP47-206ENST00000525367 C2orf78A6NCI8 922 aa5.94□□□□□ -1.46
USP47-206ENST00000525367 ADCY6O43306 1168 aa5.94□□□□□ -1.46
USP47-206ENST00000525367 AKR1B10O60218 316 aa5.94□□□□□ -1.46
USP47-206ENST00000525367 CHGBP05060 677 aa5.94□□□□□ -1.46
USP47-206ENST00000525367 SETSIPP0DME0 302 aa5.94□□□□□ -1.46
USP47-206ENST00000525367 MED14OSP0DP75 135 aa5.94□□□□□ -1.46
USP47-206ENST00000525367 DSC2Q02487 901 aa5.94□□□□□ -1.46
USP47-206ENST00000525367 MGAT2Q10469 447 aa5.94□□□□□ -1.46
USP47-206ENST00000525367 BIRC3Q13489 604 aa5.94□□□□□ -1.46
USP47-206ENST00000525367 TBR1Q16650 682 aa5.94□□□□□ -1.46
USP47-206ENST00000525367 PGS1Q32NB8 556 aa5.94□□□□□ -1.46
USP47-206ENST00000525367 KRBA2Q6ZNG9 492 aa5.94□□□□□ -1.46
USP47-206ENST00000525367 SRGAP1Q7Z6B7 1085 aa5.94□□□□□ -1.46
USP47-206ENST00000525367 RTKN2Q8IZC4 609 aa5.94□□□□□ -1.46
USP47-206ENST00000525367 CAMKK1Q8N5S9 505 aa5.94□□□□□ -1.46
USP47-206ENST00000525367 PARD3BQ8TEW8 1205 aa5.94□□□□□ -1.46
USP47-206ENST00000525367 LRFN3Q9BTN0 628 aa5.94□□□□□ -1.46
USP47-206ENST00000525367 SELENOOQ9BVL4 669 aa5.94□□□□□ -1.46
USP47-206ENST00000525367 LDAHQ9H6V9 325 aa5.94□□□□□ -1.46
USP47-206ENST00000525367 TLR9Q9NR96 1032 aa5.94□□□□□ -1.46
USP47-206ENST00000525367 RBM12Q9NTZ6 932 aaKnown RBP5.94□□□□□ -1.46
USP47-206ENST00000525367 ING3Q9NXR8 418 aa5.94□□□□□ -1.46
USP47-206ENST00000525367 FBXO10Q9UK96 956 aa5.94□□□□□ -1.46
USP47-206ENST00000525367 CNOT6Q9ULM6 557 aaKnown RBP5.94□□□□□ -1.46
USP47-206ENST00000525367 SMG5Q9UPR3 1016 aaKnown RBP5.94□□□□□ -1.46
USP47-206ENST00000525367 PCDHB1Q9Y5F3 818 aa5.94□□□□□ -1.46
USP47-206ENST00000525367 SCINQ9Y6U3 715 aa5.94□□□□□ -1.46
USP47-206ENST00000525367 KLRG2A4D1S0 409 aaPredicted RBP5.93□□□□□ -1.46
USP47-206ENST00000525367 CYP7B1O75881 506 aa5.93□□□□□ -1.46
USP47-206ENST00000525367 LTA4HP09960 611 aaKnown RBP5.93□□□□□ -1.46
USP47-206ENST00000525367 RHCEP18577 417 aa5.93□□□□□ -1.46
USP47-206ENST00000525367 CSF2RBP32927 897 aa5.93□□□□□ -1.46
USP47-206ENST00000525367 WASP42768 502 aa5.93□□□□□ -1.46
USP47-206ENST00000525367 MRE11P49959 708 aa5.93□□□□□ -1.46
USP47-206ENST00000525367 RHDQ02161 417 aa5.93□□□□□ -1.46
USP47-206ENST00000525367 ZNF124Q15973 351 aa5.93□□□□□ -1.46
USP47-206ENST00000525367 KLHDC10Q6PID8 442 aa5.93□□□□□ -1.46
USP47-206ENST00000525367 Q6ZUG5 572 aa5.93□□□□□ -1.46
USP47-206ENST00000525367 CHST15Q7LFX5 561 aaPredicted RBP5.93□□□□□ -1.46
USP47-206ENST00000525367 CLEC14AQ86T13 490 aa5.93□□□□□ -1.46
USP47-206ENST00000525367 MYLK4Q86YV6 388 aaPredicted RBP5.93□□□□□ -1.46
USP47-206ENST00000525367 RHOT1Q8IXI2 618 aa5.93□□□□□ -1.46
USP47-206ENST00000525367 TMTC2Q8N394 836 aa5.93□□□□□ -1.46
USP47-206ENST00000525367 LILRA3Q8N6C8 439 aaPredicted RBP5.93□□□□□ -1.46
USP47-206ENST00000525367 GPR156Q8NFN8 814 aa5.93□□□□□ -1.46
USP47-206ENST00000525367 OSBPL6Q9BZF3 934 aa5.93□□□□□ -1.46
USP47-206ENST00000525367 CD320Q9NPF0 282 aa5.93□□□□□ -1.46
USP47-206ENST00000525367 FAM184BQ9ULE4 1060 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms