RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 PSMG3-AS1Q96PY0 264 aa6.21□□□□□ -1.42
USP47-204ENST00000525078 C7orf25Q9BPX7 421 aa6.21□□□□□ -1.42
USP47-204ENST00000525078 FOXP3Q9BZS1 431 aa6.21□□□□□ -1.42
USP47-204ENST00000525078 PREBQ9HCU5 417 aa6.21□□□□□ -1.42
USP47-204ENST00000525078 SARS2Q9NP81 518 aaKnown RBP6.21□□□□□ -1.42
USP47-204ENST00000525078 SLC6A20Q9NP91 592 aa6.21□□□□□ -1.42
USP47-204ENST00000525078 PNPOQ9NVS9 261 aa6.21□□□□□ -1.42
USP47-204ENST00000525078 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.21□□□□□ -1.42
USP47-204ENST00000525078 ZSWIM5Q9P217 1185 aa6.21□□□□□ -1.42
USP47-204ENST00000525078 NFKBIL1Q9UBC1 381 aaPredicted RBP6.21□□□□□ -1.42
USP47-204ENST00000525078 ORC3Q9UBD5 711 aaPredicted RBP6.21□□□□□ -1.42
USP47-204ENST00000525078 GULP1Q9UBP9 304 aa6.21□□□□□ -1.42
USP47-204ENST00000525078 AFF4Q9UHB7 1163 aaKnown RBP6.21□□□□□ -1.42
USP47-204ENST00000525078 USP18Q9UMW8 372 aa6.21□□□□□ -1.42
USP47-204ENST00000525078 ARHGAP26Q9UNA1 814 aa6.21□□□□□ -1.42
USP47-204ENST00000525078 MAN2B2Q9Y2E5 1009 aa6.21□□□□□ -1.42
USP47-204ENST00000525078 ZNF281Q9Y2X9 895 aa6.21□□□□□ -1.42
USP47-204ENST00000525078 PCDHB1Q9Y5F3 818 aa6.21□□□□□ -1.42
USP47-204ENST00000525078 F5H0A9 414 aaPredicted RBP6.2□□□□□ -1.42
USP47-204ENST00000525078 P4HA2O15460 535 aa6.2□□□□□ -1.42
USP47-204ENST00000525078 PCDH8O95206 1070 aa6.2□□□□□ -1.42
USP47-204ENST00000525078 IGHA1P01876 353 aa6.2□□□□□ -1.42
USP47-204ENST00000525078 TGFB3P10600 412 aa6.2□□□□□ -1.42
USP47-204ENST00000525078 PTPN1P18031 435 aaKnown RBP6.2□□□□□ -1.42
USP47-204ENST00000525078 ENDOUP21128 410 aaKnown RBP6.2□□□□□ -1.42
USP47-204ENST00000525078 CTNNA1P35221 906 aaKnown RBP6.2□□□□□ -1.42
USP47-204ENST00000525078 UBA7P41226 1012 aa6.2□□□□□ -1.42
USP47-204ENST00000525078 ADCY2Q08462 1091 aa6.2□□□□□ -1.42
USP47-204ENST00000525078 PTK2BQ14289 1009 aa6.2□□□□□ -1.42
USP47-204ENST00000525078 NOMO1Q15155 1222 aa6.2□□□□□ -1.42
USP47-204ENST00000525078 DLGAP5Q15398 846 aa6.2□□□□□ -1.42
USP47-204ENST00000525078 SURF1Q15526 300 aa6.2□□□□□ -1.42
USP47-204ENST00000525078 C3orf38Q5JPI3 329 aa6.2□□□□□ -1.42
USP47-204ENST00000525078 SULT6B1Q6IMI4 303 aa6.2□□□□□ -1.42
USP47-204ENST00000525078 KIAA1841Q6NSI8 718 aa6.2□□□□□ -1.42
USP47-204ENST00000525078 CNKSR3Q6P9H4 555 aa6.2□□□□□ -1.42
USP47-204ENST00000525078 RHOT1Q8IXI2 618 aa6.2□□□□□ -1.42
USP47-204ENST00000525078 LINC00116Q8NCU8 138 aa6.2□□□□□ -1.42
USP47-204ENST00000525078 UHMK1Q8TAS1 419 aaKnown RBP6.2□□□□□ -1.42
USP47-204ENST00000525078 PIWIL2Q8TC59 973 aaKnown RBP6.2□□□□□ -1.42
USP47-204ENST00000525078 RSAD2Q8WXG1 361 aa6.2□□□□□ -1.42
USP47-204ENST00000525078 MSLNLQ96KJ4 702 aa6.2□□□□□ -1.42
USP47-204ENST00000525078 FAM167AQ96KS9 214 aa6.2□□□□□ -1.42
USP47-204ENST00000525078 GBP4Q96PP9 640 aa6.2□□□□□ -1.42
USP47-204ENST00000525078 DHX36Q9H2U1 1008 aaKnown RBP6.2□□□□□ -1.42
USP47-204ENST00000525078 SEMA6CQ9H3T2 930 aa6.2□□□□□ -1.42
USP47-204ENST00000525078 GREM2Q9H772 168 aa6.2□□□□□ -1.42
USP47-204ENST00000525078 TM7SF3Q9NS93 570 aa6.2□□□□□ -1.42
USP47-204ENST00000525078 KRT84Q9NSB2 600 aa6.2□□□□□ -1.42
USP47-204ENST00000525078 ABCF2Q9UG63 623 aa6.2□□□□□ -1.42
USP47-204ENST00000525078 PRSS50Q9UI38 385 aa6.2□□□□□ -1.42
USP47-204ENST00000525078 TMPRSS11EQ9UL52 423 aa6.2□□□□□ -1.42
USP47-204ENST00000525078 CDY2AQ9Y6F7 541 aa6.2□□□□□ -1.42
USP47-204ENST00000525078 PGPEP1LA6NFU8 196 aa6.19□□□□□ -1.42
USP47-204ENST00000525078 HMX3A6NHT5 357 aa6.19□□□□□ -1.42
USP47-204ENST00000525078 FAM90A27PA6NNH2 459 aa6.19□□□□□ -1.42
USP47-204ENST00000525078 DAPK3O43293 454 aa6.19□□□□□ -1.42
USP47-204ENST00000525078 THAP12O43422 761 aa6.19□□□□□ -1.42
USP47-204ENST00000525078 TADA3O75528 432 aa6.19□□□□□ -1.42
USP47-204ENST00000525078 FUCA1P04066 466 aa6.19□□□□□ -1.42
USP47-204ENST00000525078 MMEP08473 750 aa6.19□□□□□ -1.42
USP47-204ENST00000525078 MCAMP43121 646 aa6.19□□□□□ -1.42
USP47-204ENST00000525078 NRG1Q02297 640 aaPredicted RBP6.19□□□□□ -1.42
USP47-204ENST00000525078 TNK2Q07912 1038 aa6.19□□□□□ -1.42
USP47-204ENST00000525078 LMBRD2Q68DH5 695 aaPredicted RBP6.19□□□□□ -1.42
USP47-204ENST00000525078 UNQ6494/PRO21346Q6UXR6 183 aa6.19□□□□□ -1.42
USP47-204ENST00000525078 CHSY3Q70JA7 882 aa6.19□□□□□ -1.42
USP47-204ENST00000525078 CPOQ8IVL8 374 aa6.19□□□□□ -1.42
USP47-204ENST00000525078 RBM12BQ8IXT5 1001 aaKnown RBP6.19□□□□□ -1.42
USP47-204ENST00000525078 TEX11Q8IYF3 940 aa6.19□□□□□ -1.42
USP47-204ENST00000525078 USHBP1Q8N6Y0 703 aa6.19□□□□□ -1.42
USP47-204ENST00000525078 FAM71BQ8TC56 605 aa6.19□□□□□ -1.42
USP47-204ENST00000525078 IPO4Q8TEX9 1081 aaKnown RBP6.19□□□□□ -1.42
USP47-204ENST00000525078 STYXQ8WUJ0 223 aa6.19□□□□□ -1.42
USP47-204ENST00000525078 RSPH1Q8WYR4 309 aa6.19□□□□□ -1.42
USP47-204ENST00000525078 RILPL2Q969X0 211 aa6.19□□□□□ -1.42
USP47-204ENST00000525078 CLPTM1LQ96KA5 538 aa6.19□□□□□ -1.42
USP47-204ENST00000525078 KCNC2Q96PR1 638 aa6.19□□□□□ -1.42
USP47-204ENST00000525078 KATNAL1Q9BW62 490 aa6.19□□□□□ -1.42
USP47-204ENST00000525078 EIF2AQ9BY44 585 aaKnown RBP6.19□□□□□ -1.42
USP47-204ENST00000525078 GPR62Q9BZJ7 368 aa6.19□□□□□ -1.42
USP47-204ENST00000525078 SAYSD1Q9NPB0 183 aa6.19□□□□□ -1.42
USP47-204ENST00000525078 HAUS2Q9NVX0 235 aa6.19□□□□□ -1.42
USP47-204ENST00000525078 PIH1D1Q9NWS0 290 aaKnown RBP6.19□□□□□ -1.42
USP47-204ENST00000525078 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.19□□□□□ -1.42
USP47-204ENST00000525078 PCDHA6Q9UN73 950 aa6.19□□□□□ -1.42
USP47-204ENST00000525078 A0A0B4J269 797 aa6.18□□□□□ -1.42
USP47-204ENST00000525078 CCDC196A0A1B0GTZ2 297 aa6.18□□□□□ -1.42
USP47-204ENST00000525078 SLC27A2O14975 620 aa6.18□□□□□ -1.42
USP47-204ENST00000525078 DYNC1LI2O43237 492 aaPredicted RBP6.18□□□□□ -1.42
USP47-204ENST00000525078 MTA2O94776 668 aa6.18□□□□□ -1.42
USP47-204ENST00000525078 RTN3O95197 1032 aaPredicted RBP6.18□□□□□ -1.42
USP47-204ENST00000525078 ARIH2O95376 493 aa6.18□□□□□ -1.42
USP47-204ENST00000525078 TNFRSF6BO95407 300 aa6.18□□□□□ -1.42
USP47-204ENST00000525078 STARD3NLO95772 234 aa6.18□□□□□ -1.42
USP47-204ENST00000525078 C4BPAP04003 597 aaKnown RBP6.18□□□□□ -1.42
USP47-204ENST00000525078 DNTTP04053 509 aa6.18□□□□□ -1.42
USP47-204ENST00000525078 PFKMP08237 780 aa6.18□□□□□ -1.42
USP47-204ENST00000525078 ZSCAN22P10073 491 aaPredicted RBP6.18□□□□□ -1.42
USP47-204ENST00000525078 TYRP14679 529 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms