RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 CLEC17AQ6ZS10 378 aa5.04□□□□□ -1.6
CHMP4A-202ENST00000524955 LRRC55Q6ZSA7 311 aa5.04□□□□□ -1.6
CHMP4A-202ENST00000524955 ZNF598Q86UK7 904 aaKnown RBP5.04□□□□□ -1.6
CHMP4A-202ENST00000524955 ZNF280BQ86YH2 543 aa5.04□□□□□ -1.6
CHMP4A-202ENST00000524955 MAP4K3Q8IVH8 894 aa5.04□□□□□ -1.6
CHMP4A-202ENST00000524955 ABI1Q8IZP0 508 aa5.04□□□□□ -1.6
CHMP4A-202ENST00000524955 CRIPAKQ8N1N5 446 aa5.04□□□□□ -1.6
CHMP4A-202ENST00000524955 KCTD17Q8N5Z5 321 aa5.04□□□□□ -1.6
CHMP4A-202ENST00000524955 RDH13Q8NBN7 331 aa5.04□□□□□ -1.6
CHMP4A-202ENST00000524955 HASPINQ8TF76 798 aa5.04□□□□□ -1.6
CHMP4A-202ENST00000524955 SCFD1Q8WVM8 642 aa5.04□□□□□ -1.6
CHMP4A-202ENST00000524955 ARNTL2Q8WYA1 636 aa5.04□□□□□ -1.6
CHMP4A-202ENST00000524955 POMGNT1Q8WZA1 660 aa5.04□□□□□ -1.6
CHMP4A-202ENST00000524955 SMARCE1Q969G3 411 aa5.04□□□□□ -1.6
CHMP4A-202ENST00000524955 ACCSQ96QU6 501 aa5.04□□□□□ -1.6
CHMP4A-202ENST00000524955 SLC9A7Q96T83 725 aa5.04□□□□□ -1.6
CHMP4A-202ENST00000524955 RAD9AQ99638 391 aa5.04□□□□□ -1.6
CHMP4A-202ENST00000524955 CBWD1Q9BRT8 395 aa5.04□□□□□ -1.6
CHMP4A-202ENST00000524955 FAM213AQ9BRX8 229 aa5.04□□□□□ -1.6
CHMP4A-202ENST00000524955 NTPCRQ9BSD7 190 aaKnown RBP5.04□□□□□ -1.6
CHMP4A-202ENST00000524955 STRA6Q9BX79 667 aa5.04□□□□□ -1.6
CHMP4A-202ENST00000524955 MRPL4Q9BYD3 311 aaKnown RBP5.04□□□□□ -1.6
CHMP4A-202ENST00000524955 NFKBIZQ9BYH8 718 aa5.04□□□□□ -1.6
CHMP4A-202ENST00000524955 LRRC27Q9C0I9 530 aa5.04□□□□□ -1.6
CHMP4A-202ENST00000524955 TTYH1Q9H313 450 aaPredicted RBP5.04□□□□□ -1.6
CHMP4A-202ENST00000524955 PRDM12Q9H4Q4 367 aa5.04□□□□□ -1.6
CHMP4A-202ENST00000524955 TMEM134Q9H6X4 195 aa5.04□□□□□ -1.6
CHMP4A-202ENST00000524955 C17orf75Q9HAS0 396 aa5.04□□□□□ -1.6
CHMP4A-202ENST00000524955 SLC28A3Q9HAS3 691 aa5.04□□□□□ -1.6
CHMP4A-202ENST00000524955 GOLGA2P5Q9HBQ8 144 aa5.04□□□□□ -1.6
CHMP4A-202ENST00000524955 PTPRHQ9HD43 1115 aa5.04□□□□□ -1.6
CHMP4A-202ENST00000524955 CHST12Q9NRB3 414 aa5.04□□□□□ -1.6
CHMP4A-202ENST00000524955 C1orf112Q9NSG2 853 aa5.04□□□□□ -1.6
CHMP4A-202ENST00000524955 TMEM161AQ9NX61 479 aa5.04□□□□□ -1.6
CHMP4A-202ENST00000524955 USP25Q9UHP3 1055 aa5.04□□□□□ -1.6
CHMP4A-202ENST00000524955 MSRAQ9UJ68 235 aa5.04□□□□□ -1.6
CHMP4A-202ENST00000524955 MAN1B1Q9UKM7 699 aa5.04□□□□□ -1.6
CHMP4A-202ENST00000524955 TNFSF13BQ9Y275 285 aa5.04□□□□□ -1.6
CHMP4A-202ENST00000524955 PCDHGC5Q9Y5F6 944 aa5.04□□□□□ -1.6
CHMP4A-202ENST00000524955 PCDHA11Q9Y5I1 949 aa5.04□□□□□ -1.6
CHMP4A-202ENST00000524955 PVALEFA0A1B0GWK0 134 aa5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 TRIM49BA6NDI0 452 aa5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 ARL5CA6NH57 179 aa5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 CASTOR2A6NHX0 329 aa5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 PTGESO14684 152 aa5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 CLDN3O15551 220 aa5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 TGFB1I1O43294 461 aa5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 EFCAB14O75071 495 aa5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 ZC3H11AO75152 810 aaKnown RBP eCLIP5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 TOM1L1O75674 476 aa5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 PPP1R37O75864 691 aa5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 CXCL8P10145 99 aa5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 CD44P16070 742 aaKnown RBP5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 BMP6P22004 513 aa5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 IGFBP4P22692 258 aa5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 PROZP22891 400 aa5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 ADSSP30520 456 aa5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 AXLP30530 894 aa5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 CTNNB1P35222 781 aa5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 PRCPP42785 496 aa5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 CDR1P51861 262 aa5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 PMS1P54277 932 aaKnown RBP5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 STX17P56962 302 aa5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 HTRA4P83105 476 aaPredicted RBP5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 SMAD3P84022 425 aaKnown RBP5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 RNASELQ05823 741 aaKnown RBP5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 EHHADHQ08426 723 aa5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 GRIN2CQ14957 1233 aa5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 NOLC1Q14978 699 aaKnown RBP eCLIP5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 LRIT3Q3SXY7 679 aa5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 NOMO2Q5JPE7 1267 aa5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 KLHL10Q6JEL2 608 aa5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 ARMCX5Q6P1M9 558 aa5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 GLB1LQ6UWU2 654 aa5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 EPM2AIP1Q7L775 607 aaPredicted RBP5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 MRPL10Q7Z7H8 261 aaKnown RBP5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 TMEM173Q86WV6 379 aaPredicted RBP5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 MICALL1Q8N3F8 863 aa5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 FIBCD1Q8N539 461 aa5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 DEFB123Q8N688 67 aa5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 PHOSPHO2Q8TCD6 241 aa5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 GDPD5Q8WTR4 605 aa5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 BCL7CQ8WUZ0 217 aaPredicted RBP5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 PPM1EQ8WY54 764 aa5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 MYLIPQ8WY64 445 aa5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 C18orf25Q96B23 403 aaPredicted RBP5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 ELMO3Q96BJ8 720 aa5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 ZNF689Q96CS4 500 aaPredicted RBP5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 PRIMPOLQ96LW4 560 aa5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 ZMAT2Q96NC0 199 aaKnown RBP5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 PAAF1Q9BRP4 392 aa5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 PYM1Q9BRP8 204 aaKnown RBP5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 ADPGKQ9BRR6 497 aa5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 MSTO1Q9BUK6 570 aa5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 CLSTN2Q9H4D0 955 aa5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 ZNF576Q9H609 170 aa5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 CWH43Q9H720 699 aa5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 NRDE2Q9H7Z3 1164 aa5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 RSAD1Q9HA92 442 aa5.03□□□□□ -1.6
CHMP4A-202ENST00000524955 MAGEF1Q9HAY2 307 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms