RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 PADI3Q9ULW8 664 aa17.29■□□□□ 0.36
TSPAN4-213ENST00000524895 CCDC85CA6NKD9 419 aa17.28■□□□□ 0.36
TSPAN4-213ENST00000524895 KCNJ18B7U540 433 aa17.28■□□□□ 0.36
TSPAN4-213ENST00000524895 AKAP3O75969 853 aa17.28■□□□□ 0.36
TSPAN4-213ENST00000524895 MCF2P10911 925 aa17.28■□□□□ 0.36
TSPAN4-213ENST00000524895 EEF1GP26641 437 aaKnown RBP17.28■□□□□ 0.36
TSPAN4-213ENST00000524895 HOXA11P31270 313 aaPredicted RBP17.28■□□□□ 0.36
TSPAN4-213ENST00000524895 PSMC2P35998 433 aaKnown RBP17.28■□□□□ 0.36
TSPAN4-213ENST00000524895 SPAG1Q07617 926 aa17.28■□□□□ 0.36
TSPAN4-213ENST00000524895 KCNJ12Q14500 433 aa17.28■□□□□ 0.36
TSPAN4-213ENST00000524895 DCAF4L1Q3SXM0 396 aa17.28■□□□□ 0.36
TSPAN4-213ENST00000524895 SLC27A1Q6PCB7 646 aa17.28■□□□□ 0.36
TSPAN4-213ENST00000524895 FAM186BQ8IYM0 893 aa17.28■□□□□ 0.36
TSPAN4-213ENST00000524895 GPD1LQ8N335 351 aa17.28■□□□□ 0.36
TSPAN4-213ENST00000524895 ANKRD20A12PQ8NF67 263 aa17.28■□□□□ 0.36
TSPAN4-213ENST00000524895 OSBPL7Q9BZF2 842 aa17.28■□□□□ 0.36
TSPAN4-213ENST00000524895 HAPLN2Q9GZV7 340 aa17.28■□□□□ 0.36
TSPAN4-213ENST00000524895 HSD3B7Q9H2F3 369 aa17.28■□□□□ 0.36
TSPAN4-213ENST00000524895 FSD2A1L4K1 749 aa17.27■□□□□ 0.36
TSPAN4-213ENST00000524895 GOLGA8IPA6NC78 632 aa17.27■□□□□ 0.36
TSPAN4-213ENST00000524895 GOLGA8JA6NMD2 632 aa17.27■□□□□ 0.36
TSPAN4-213ENST00000524895 ABLIM1O14639 778 aa17.27■□□□□ 0.36
TSPAN4-213ENST00000524895 OGTO15294 1046 aa17.27■□□□□ 0.36
TSPAN4-213ENST00000524895 EXTL3O43909 919 aa17.27■□□□□ 0.36
TSPAN4-213ENST00000524895 PARNO95453 639 aaKnown RBP17.27■□□□□ 0.36
TSPAN4-213ENST00000524895 NPTXRO95502 500 aa17.27■□□□□ 0.36
TSPAN4-213ENST00000524895 LDHAP00338 332 aaKnown RBP17.27■□□□□ 0.36
TSPAN4-213ENST00000524895 ZNF18P17022 549 aa17.27■□□□□ 0.36
TSPAN4-213ENST00000524895 CYP2C18P33260 490 aa17.27■□□□□ 0.36
TSPAN4-213ENST00000524895 CASP4P49662 377 aa17.27■□□□□ 0.36
TSPAN4-213ENST00000524895 CCL23P55773 120 aa17.27■□□□□ 0.36
TSPAN4-213ENST00000524895 SNRNP35Q16560 246 aaKnown RBP17.27■□□□□ 0.36
TSPAN4-213ENST00000524895 TWF2Q6IBS0 349 aaKnown RBP17.27■□□□□ 0.36
TSPAN4-213ENST00000524895 IRF2BP1Q8IU81 584 aa17.27■□□□□ 0.36
TSPAN4-213ENST00000524895 SCLYQ96I15 445 aa17.27■□□□□ 0.36
TSPAN4-213ENST00000524895 FAM213AQ9BRX8 229 aa17.27■□□□□ 0.36
TSPAN4-213ENST00000524895 MKNK1Q9BUB5 465 aa17.27■□□□□ 0.36
TSPAN4-213ENST00000524895 IFIH1Q9BYX4 1025 aaKnown RBP17.27■□□□□ 0.36
TSPAN4-213ENST00000524895 TRIM6Q9C030 488 aaPredicted RBP17.27■□□□□ 0.36
TSPAN4-213ENST00000524895 WNT8AQ9H1J5 351 aa17.27■□□□□ 0.36
TSPAN4-213ENST00000524895 KIAA1586Q9HCI6 787 aa17.27■□□□□ 0.36
TSPAN4-213ENST00000524895 CHST12Q9NRB3 414 aa17.27■□□□□ 0.36
TSPAN4-213ENST00000524895 KIAA0355O15063 1070 aa17.26■□□□□ 0.35
TSPAN4-213ENST00000524895 NBNO60934 754 aa17.26■□□□□ 0.35
TSPAN4-213ENST00000524895 ATP1A3P13637 1013 aa17.26■□□□□ 0.35
TSPAN4-213ENST00000524895 ZSCAN20P17040 1043 aaPredicted RBP17.26■□□□□ 0.35
TSPAN4-213ENST00000524895 MTIF2P46199 727 aaKnown RBP17.26■□□□□ 0.35
TSPAN4-213ENST00000524895 UVSSAQ2YD98 709 aa17.26■□□□□ 0.35
TSPAN4-213ENST00000524895 TCP11X2Q5H9J9 407 aa17.26■□□□□ 0.35
TSPAN4-213ENST00000524895 THNSL1Q8IYQ7 743 aa17.26■□□□□ 0.35
TSPAN4-213ENST00000524895 TNS4Q8IZW8 715 aa17.26■□□□□ 0.35
TSPAN4-213ENST00000524895 RDH13Q8NBN7 331 aa17.26■□□□□ 0.35
TSPAN4-213ENST00000524895 ZSWIM2Q8NEG5 633 aa17.26■□□□□ 0.35
TSPAN4-213ENST00000524895 HTATIP2Q9BUP3 242 aa17.26■□□□□ 0.35
TSPAN4-213ENST00000524895 GRPEL1Q9HAV7 217 aa17.26■□□□□ 0.35
TSPAN4-213ENST00000524895 METTL14Q9HCE5 456 aaKnown RBP17.26■□□□□ 0.35
TSPAN4-213ENST00000524895 PRKAG2Q9UGJ0 569 aa17.26■□□□□ 0.35
TSPAN4-213ENST00000524895 ARMCX3Q9UH62 379 aaPredicted RBP17.26■□□□□ 0.35
TSPAN4-213ENST00000524895 ZNF233A6NK53 670 aa17.25■□□□□ 0.35
TSPAN4-213ENST00000524895 MAPK13O15264 365 aa17.25■□□□□ 0.35
TSPAN4-213ENST00000524895 KRT13P13646 458 aa17.25■□□□□ 0.35
TSPAN4-213ENST00000524895 RAG1P15918 1043 aa17.25■□□□□ 0.35
TSPAN4-213ENST00000524895 ACOT2P49753 483 aa17.25■□□□□ 0.35
TSPAN4-213ENST00000524895 PLCB2Q00722 1185 aa17.25■□□□□ 0.35
TSPAN4-213ENST00000524895 KYAT1Q16773 422 aa17.25■□□□□ 0.35
TSPAN4-213ENST00000524895 SEZ6Q53EL9 994 aa17.25■□□□□ 0.35
TSPAN4-213ENST00000524895 FRMD5Q7Z6J6 570 aa17.25■□□□□ 0.35
TSPAN4-213ENST00000524895 CBWD2Q8IUF1 395 aa17.25■□□□□ 0.35
TSPAN4-213ENST00000524895 FBXL18Q96ME1 805 aa17.25■□□□□ 0.35
TSPAN4-213ENST00000524895 EIF2AQ9BY44 585 aaKnown RBP17.25■□□□□ 0.35
TSPAN4-213ENST00000524895 RBAKQ9NYW8 714 aaPredicted RBP17.25■□□□□ 0.35
TSPAN4-213ENST00000524895 TRIM43BA6NCK2 446 aa17.24■□□□□ 0.35
TSPAN4-213ENST00000524895 RBAK-RBAKDNI3L0D1 243 aa17.24■□□□□ 0.35
TSPAN4-213ENST00000524895 TULP1O00294 542 aaPredicted RBP17.24■□□□□ 0.35
TSPAN4-213ENST00000524895 FAM189A1O60320 539 aa17.24■□□□□ 0.35
TSPAN4-213ENST00000524895 SERPINC1P01008 464 aa17.24■□□□□ 0.35
TSPAN4-213ENST00000524895 TIMP1P01033 207 aa17.24■□□□□ 0.35
TSPAN4-213ENST00000524895 ADRB2P07550 413 aa17.24■□□□□ 0.35
TSPAN4-213ENST00000524895 TPM2P07951 284 aa17.24■□□□□ 0.35
TSPAN4-213ENST00000524895 RFC2P35250 354 aa17.24■□□□□ 0.35
TSPAN4-213ENST00000524895 MARSP56192 900 aaKnown RBP17.24■□□□□ 0.35
TSPAN4-213ENST00000524895 OSTNP61366 133 aa17.24■□□□□ 0.35
TSPAN4-213ENST00000524895 KRT31Q15323 416 aa17.24■□□□□ 0.35
TSPAN4-213ENST00000524895 ZBTB41Q5SVQ8 909 aa17.24■□□□□ 0.35
TSPAN4-213ENST00000524895 UBXN11Q5T124 520 aa17.24■□□□□ 0.35
TSPAN4-213ENST00000524895 INTS8Q75QN2 995 aaKnown RBP17.24■□□□□ 0.35
TSPAN4-213ENST00000524895 C7orf61Q8IZ16 206 aa17.24■□□□□ 0.35
TSPAN4-213ENST00000524895 CEP120Q8N960 986 aa17.24■□□□□ 0.35
TSPAN4-213ENST00000524895 SEPT8Q92599 483 aa17.24■□□□□ 0.35
TSPAN4-213ENST00000524895 APBB2Q92870 758 aa17.24■□□□□ 0.35
TSPAN4-213ENST00000524895 TRIM43Q96BQ3 446 aaPredicted RBP17.24■□□□□ 0.35
TSPAN4-213ENST00000524895 FTHL17Q9BXU8 183 aa17.24■□□□□ 0.35
TSPAN4-213ENST00000524895 TMX1Q9H3N1 280 aa17.24■□□□□ 0.35
TSPAN4-213ENST00000524895 LIMA1Q9UHB6 759 aaKnown RBP17.24■□□□□ 0.35
TSPAN4-213ENST00000524895 ALPK3Q96L96 1907 aa17.23■□□□□ 0.35
TSPAN4-213ENST00000524895 CXCL10P02778 98 aa17.23■□□□□ 0.35
TSPAN4-213ENST00000524895 CLTAP09496 248 aa17.23■□□□□ 0.35
TSPAN4-213ENST00000524895 STAG3L1P0CL83 205 aa17.23■□□□□ 0.35
TSPAN4-213ENST00000524895 PRKCSHP14314 528 aaPredicted RBP17.23■□□□□ 0.35
TSPAN4-213ENST00000524895 TNFSF9P41273 254 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms