RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-225	ENST00000524141	GRK7	Q8WTQ7	553 aa		10.99	□□□□□ -0.65
SPIDR-225	ENST00000524141	SLC20A1	Q8WUM9	679 aa		10.99	□□□□□ -0.65
SPIDR-225	ENST00000524141	DCAF4	Q8WV16	495 aa		10.99	□□□□□ -0.65
SPIDR-225	ENST00000524141	C7orf43	Q8WVR3	580 aa		10.99	□□□□□ -0.65
SPIDR-225	ENST00000524141	TUFT1	Q9NNX1	390 aa		10.99	□□□□□ -0.65
SPIDR-225	ENST00000524141	KCND2	Q9NZV8	630 aa		10.99	□□□□□ -0.65
SPIDR-225	ENST00000524141	SRP68	Q9UHB9	627 aa	Known RBP	10.99	□□□□□ -0.65
SPIDR-225	ENST00000524141	ASIC3	Q9UHC3	531 aa		10.99	□□□□□ -0.65
SPIDR-225	ENST00000524141	LGALS13	Q9UHV8	139 aa		10.99	□□□□□ -0.65
SPIDR-225	ENST00000524141	PNMA3	Q9UL41	463 aa		10.99	□□□□□ -0.65
SPIDR-225	ENST00000524141	DAGLA	Q9Y4D2	1042 aa		10.99	□□□□□ -0.65
SPIDR-225	ENST00000524141	P4HA2	O15460	535 aa		10.99	□□□□□ -0.65
SPIDR-225	ENST00000524141	CDH16	O75309	829 aa		10.99	□□□□□ -0.65
SPIDR-225	ENST00000524141	RPS6KA4	O75676	772 aa		10.99	□□□□□ -0.65
SPIDR-225	ENST00000524141	CCNH	P51946	323 aa	Predicted RBP	10.99	□□□□□ -0.65
SPIDR-225	ENST00000524141	KRT17	Q04695	432 aa		10.99	□□□□□ -0.65
SPIDR-225	ENST00000524141	INTS8	Q75QN2	995 aa	Known RBP	10.99	□□□□□ -0.65
SPIDR-225	ENST00000524141	FAM178B	Q8IXR5	827 aa		10.99	□□□□□ -0.65
SPIDR-225	ENST00000524141	SPICE1	Q8N0Z3	855 aa		10.99	□□□□□ -0.65
SPIDR-225	ENST00000524141	GDAP1	Q8TB36	358 aa		10.99	□□□□□ -0.65
SPIDR-225	ENST00000524141	CCDC77	Q9BR77	488 aa		10.99	□□□□□ -0.65
SPIDR-225	ENST00000524141	DNAJC18	Q9H819	358 aa		10.99	□□□□□ -0.65
SPIDR-225	ENST00000524141	ETNK1	Q9HBU6	452 aa		10.99	□□□□□ -0.65
SPIDR-225	ENST00000524141		A8MUI8	341 aa		10.99	□□□□□ -0.65
SPIDR-225	ENST00000524141	FAM86B1	E9PN63	330 aa		10.99	□□□□□ -0.65
SPIDR-225	ENST00000524141	MSH4	O15457	936 aa		10.99	□□□□□ -0.65
SPIDR-225	ENST00000524141	SKAP2	O75563	359 aa	Predicted RBP	10.99	□□□□□ -0.65
SPIDR-225	ENST00000524141	GAS8	O95995	478 aa		10.99	□□□□□ -0.65
SPIDR-225	ENST00000524141	FAM86B2	P0C5J1	330 aa		10.99	□□□□□ -0.65
SPIDR-225	ENST00000524141	TAF11	Q15544	211 aa		10.99	□□□□□ -0.65
SPIDR-225	ENST00000524141	C11orf91	Q3C1V1	193 aa		10.99	□□□□□ -0.65
SPIDR-225	ENST00000524141	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	10.99	□□□□□ -0.65
SPIDR-225	ENST00000524141	SGO2	Q562F6	1265 aa		10.99	□□□□□ -0.65
SPIDR-225	ENST00000524141	RHBDF2	Q6PJF5	856 aa		10.99	□□□□□ -0.65
SPIDR-225	ENST00000524141	C1orf186	Q6ZWK4	172 aa		10.99	□□□□□ -0.65
SPIDR-225	ENST00000524141	ZNF720	Q7Z2F6	126 aa		10.99	□□□□□ -0.65
SPIDR-225	ENST00000524141	RPUSD2	Q8IZ73	545 aa	Known RBP	10.99	□□□□□ -0.65
SPIDR-225	ENST00000524141	AGGF1	Q8N302	714 aa	eCLIP	10.99	□□□□□ -0.65	2e-6	■■□□□ 12.5
SPIDR-225	ENST00000524141	LMO3	Q8TAP4	145 aa		10.99	□□□□□ -0.65
SPIDR-225	ENST00000524141	ZNF564	Q8TBZ8	553 aa	Predicted RBP	10.99	□□□□□ -0.65
SPIDR-225	ENST00000524141	CCDC17	Q96LX7	622 aa		10.99	□□□□□ -0.65
SPIDR-225	ENST00000524141	RMDN2	Q96LZ7	410 aa		10.99	□□□□□ -0.65
SPIDR-225	ENST00000524141	GPR101	Q96P66	508 aa	Predicted RBP	10.99	□□□□□ -0.65
SPIDR-225	ENST00000524141	AMN	Q9BXJ7	453 aa		10.99	□□□□□ -0.65
SPIDR-225	ENST00000524141	LRMDA	Q9H2I8	198 aa		10.99	□□□□□ -0.65
SPIDR-225	ENST00000524141	UBE2T	Q9NPD8	197 aa	Predicted RBP	10.99	□□□□□ -0.65
SPIDR-225	ENST00000524141	AAAS	Q9NRG9	546 aa		10.99	□□□□□ -0.65
SPIDR-225	ENST00000524141	UVRAG	Q9P2Y5	699 aa		10.99	□□□□□ -0.65
SPIDR-225	ENST00000524141	GGA1	Q9UJY5	639 aa		10.99	□□□□□ -0.65
SPIDR-225	ENST00000524141	TCRBV7S2A1N4T	A0A589	114 aa		10.98	□□□□□ -0.65
SPIDR-225	ENST00000524141	SFI1	A8K8P3	1242 aa		10.98	□□□□□ -0.65
SPIDR-225	ENST00000524141	MPHOSPH10	O00566	681 aa	Known RBP	10.98	□□□□□ -0.65
SPIDR-225	ENST00000524141	THAP12	O43422	761 aa		10.98	□□□□□ -0.65
SPIDR-225	ENST00000524141	EXOC3	O60645	756 aa		10.98	□□□□□ -0.65
SPIDR-225	ENST00000524141	SHMT1	P34896	483 aa		10.98	□□□□□ -0.65
SPIDR-225	ENST00000524141	KCNJ1	P48048	391 aa		10.98	□□□□□ -0.65
SPIDR-225	ENST00000524141	IL9R	Q01113	521 aa		10.98	□□□□□ -0.65
SPIDR-225	ENST00000524141	ANKRD35	Q8N283	1001 aa		10.98	□□□□□ -0.65
SPIDR-225	ENST00000524141	RIBC1	Q8N443	379 aa	Predicted RBP	10.98	□□□□□ -0.65
SPIDR-225	ENST00000524141	ZNF483	Q8TF39	744 aa	Predicted RBP	10.98	□□□□□ -0.65
SPIDR-225	ENST00000524141	NAF1	Q96HR8	494 aa	Known RBP	10.98	□□□□□ -0.65
SPIDR-225	ENST00000524141	TRAIP	Q9BWF2	469 aa		10.98	□□□□□ -0.65
SPIDR-225	ENST00000524141	PITPNM3	Q9BZ71	974 aa		10.98	□□□□□ -0.65
SPIDR-225	ENST00000524141	MYH11	P35749	1972 aa		10.98	□□□□□ -0.65
SPIDR-225	ENST00000524141	LOXHD1	Q8IVV2	1947 aa		10.98	□□□□□ -0.65
SPIDR-225	ENST00000524141	ABLIM1	O14639	778 aa		10.98	□□□□□ -0.65
SPIDR-225	ENST00000524141	FSCN2	O14926	492 aa		10.98	□□□□□ -0.65
SPIDR-225	ENST00000524141	HLA-DOA	P06340	250 aa		10.98	□□□□□ -0.65
SPIDR-225	ENST00000524141	CREB1	P16220	341 aa		10.98	□□□□□ -0.65
SPIDR-225	ENST00000524141	MUT	P22033	750 aa		10.98	□□□□□ -0.65
SPIDR-225	ENST00000524141	PTK6	Q13882	451 aa		10.98	□□□□□ -0.65
SPIDR-225	ENST00000524141	COG2	Q14746	738 aa		10.98	□□□□□ -0.65
SPIDR-225	ENST00000524141	CMPK2	Q5EBM0	449 aa		10.98	□□□□□ -0.65
SPIDR-225	ENST00000524141	CEP128	Q6ZU80	1094 aa		10.98	□□□□□ -0.65
SPIDR-225	ENST00000524141	APLF	Q8IW19	511 aa	Predicted RBP	10.98	□□□□□ -0.65
SPIDR-225	ENST00000524141	INPP5D	Q92835	1189 aa		10.98	□□□□□ -0.65
SPIDR-225	ENST00000524141	RNPEPL1	Q9HAU8	725 aa		10.98	□□□□□ -0.65
SPIDR-225	ENST00000524141	GTF3C4	Q9UKN8	822 aa		10.98	□□□□□ -0.65
SPIDR-225	ENST00000524141	KCNQ2	O43526	872 aa		10.97	□□□□□ -0.65
SPIDR-225	ENST00000524141	GH1	P01241	217 aa		10.97	□□□□□ -0.65
SPIDR-225	ENST00000524141	CYP1A2	P05177	515 aa		10.97	□□□□□ -0.65
SPIDR-225	ENST00000524141	ZNF76	P36508	570 aa		10.97	□□□□□ -0.65
SPIDR-225	ENST00000524141	POLG	P54098	1239 aa	Predicted RBP	10.97	□□□□□ -0.65
SPIDR-225	ENST00000524141	GPSM2	P81274	684 aa		10.97	□□□□□ -0.65
SPIDR-225	ENST00000524141	NR1H3	Q13133	447 aa		10.97	□□□□□ -0.65
SPIDR-225	ENST00000524141	STAT4	Q14765	748 aa		10.97	□□□□□ -0.65
SPIDR-225	ENST00000524141	ECHDC2	Q86YB7	292 aa		10.97	□□□□□ -0.65
SPIDR-225	ENST00000524141	SYCP3	Q8IZU3	236 aa		10.97	□□□□□ -0.65
SPIDR-225	ENST00000524141	TMEM237	Q96Q45	408 aa		10.97	□□□□□ -0.65
SPIDR-225	ENST00000524141	HSD17B14	Q9BPX1	270 aa		10.97	□□□□□ -0.65
SPIDR-225	ENST00000524141	NUP85	Q9BW27	656 aa		10.97	□□□□□ -0.65
SPIDR-225	ENST00000524141	MLXIPL	Q9NP71	852 aa		10.97	□□□□□ -0.65
SPIDR-225	ENST00000524141	RGL1	Q9NZL6	768 aa		10.97	□□□□□ -0.65
SPIDR-225	ENST00000524141	SUGT1	Q9Y2Z0	365 aa		10.97	□□□□□ -0.65
SPIDR-225	ENST00000524141	STARD13	Q9Y3M8	1113 aa		10.97	□□□□□ -0.65
SPIDR-225	ENST00000524141	SPATA31A5	Q5VU36	1347 aa		10.97	□□□□□ -0.65
SPIDR-225	ENST00000524141	SPATA31A6	Q5VVP1	1343 aa		10.97	□□□□□ -0.65
SPIDR-225	ENST00000524141	SPATA31A7	Q8IWB4	1347 aa		10.97	□□□□□ -0.65
SPIDR-225	ENST00000524141	TP73	O15350	636 aa		10.97	□□□□□ -0.65
SPIDR-225	ENST00000524141	CYP3A4	P08684	503 aa		10.97	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms