RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 PRPF4BQ13523 1007 aaKnown RBP13.06□□□□□ -0.32
PVT1-215ENST00000522963 STIM1Q13586 685 aa13.06□□□□□ -0.32
PVT1-215ENST00000522963 ANO6Q4KMQ2 910 aa13.06□□□□□ -0.32
PVT1-215ENST00000522963 SLC39A4Q6P5W5 647 aa13.06□□□□□ -0.32
PVT1-215ENST00000522963 LRSAM1Q6UWE0 723 aa13.06□□□□□ -0.32
PVT1-215ENST00000522963 SPRED2Q7Z698 418 aa13.06□□□□□ -0.32
PVT1-215ENST00000522963 SYCP3Q8IZU3 236 aa13.06□□□□□ -0.32
PVT1-215ENST00000522963 NELFBQ8WX92 580 aa13.06□□□□□ -0.32
PVT1-215ENST00000522963 MYLIPQ8WY64 445 aa13.06□□□□□ -0.32
PVT1-215ENST00000522963 ARNTL2Q8WYA1 636 aa13.06□□□□□ -0.32
PVT1-215ENST00000522963 DHTKD1Q96HY7 919 aaPredicted RBP13.06□□□□□ -0.32
PVT1-215ENST00000522963 PRIMPOLQ96LW4 560 aa13.06□□□□□ -0.32
PVT1-215ENST00000522963 CDX2Q99626 313 aaPredicted RBP13.06□□□□□ -0.32
PVT1-215ENST00000522963 ACO2Q99798 780 aaKnown RBP13.06□□□□□ -0.32
PVT1-215ENST00000522963 MRPL4Q9BYD3 311 aaKnown RBP13.06□□□□□ -0.32
PVT1-215ENST00000522963 DNAJC25Q9H1X3 360 aa13.06□□□□□ -0.32
PVT1-215ENST00000522963 TMEM206Q9H813 350 aa13.06□□□□□ -0.32
PVT1-215ENST00000522963 EXOC7Q9UPT5 735 aa13.06□□□□□ -0.32
PVT1-215ENST00000522963 CTNND2Q9UQB3 1225 aa13.06□□□□□ -0.32
PVT1-215ENST00000522963 PIN4Q9Y237 131 aaKnown RBP13.06□□□□□ -0.32
PVT1-215ENST00000522963 INSL6Q9Y581 213 aa13.06□□□□□ -0.32
PVT1-215ENST00000522963 PCDHB7Q9Y5E2 793 aa13.06□□□□□ -0.32
PVT1-215ENST00000522963 TMEM265A0A087WTH1 108 aa13.05□□□□□ -0.32
PVT1-215ENST00000522963 ANKRD63C9JTQ0 380 aa13.05□□□□□ -0.32
PVT1-215ENST00000522963 PSMA7O14818 248 aa13.05□□□□□ -0.32
PVT1-215ENST00000522963 ARF4P18085 180 aaPredicted RBP13.05□□□□□ -0.32
PVT1-215ENST00000522963 CCNE1P24864 410 aa13.05□□□□□ -0.32
PVT1-215ENST00000522963 HOXA11P31270 313 aaPredicted RBP13.05□□□□□ -0.32
PVT1-215ENST00000522963 STX17P56962 302 aa13.05□□□□□ -0.32
PVT1-215ENST00000522963 TAP1Q03518 808 aa13.05□□□□□ -0.32
PVT1-215ENST00000522963 PAK1Q13153 545 aa13.05□□□□□ -0.32
PVT1-215ENST00000522963 PCBP1Q15365 356 aaKnown RBP eCLIP13.05□□□□□ -0.32
PVT1-215ENST00000522963 PAN2Q504Q3 1202 aaKnown RBP13.05□□□□□ -0.32
PVT1-215ENST00000522963 ZCWPW2Q504Y3 356 aa13.05□□□□□ -0.32
PVT1-215ENST00000522963 TWF2Q6IBS0 349 aaKnown RBP13.05□□□□□ -0.32
PVT1-215ENST00000522963 CENPPQ6IPU0 288 aa13.05□□□□□ -0.32
PVT1-215ENST00000522963 P2RX5Q93086 422 aa13.05□□□□□ -0.32
PVT1-215ENST00000522963 BICD1Q96G01 975 aa13.05□□□□□ -0.32
PVT1-215ENST00000522963 CPB2Q96IY4 423 aa13.05□□□□□ -0.32
PVT1-215ENST00000522963 ZBTB45Q96K62 511 aaPredicted RBP13.05□□□□□ -0.32
PVT1-215ENST00000522963 GUCD1Q96NT3 240 aa13.05□□□□□ -0.32
PVT1-215ENST00000522963 MED15Q96RN5 788 aa13.05□□□□□ -0.32
PVT1-215ENST00000522963 GBP3Q9H0R5 595 aa13.05□□□□□ -0.32
PVT1-215ENST00000522963 RGS18Q9NS28 235 aa13.05□□□□□ -0.32
PVT1-215ENST00000522963 C1orf112Q9NSG2 853 aa13.05□□□□□ -0.32
PVT1-215ENST00000522963 AGPAT5Q9NUQ2 364 aa13.05□□□□□ -0.32
PVT1-215ENST00000522963 TYW1Q9NV66 732 aaKnown RBP13.05□□□□□ -0.32
PVT1-215ENST00000522963 DACH1Q9UI36 760 aa13.05□□□□□ -0.32
PVT1-215ENST00000522963 CNTNAP2Q9UHC6 1331 aa13.05□□□□□ -0.32
PVT1-215ENST00000522963 MYH11P35749 1972 aa13.05□□□□□ -0.32
PVT1-215ENST00000522963 LINC01553A4QN01 128 aa13.04□□□□□ -0.32
PVT1-215ENST00000522963 TRIM49BA6NDI0 452 aa13.04□□□□□ -0.32
PVT1-215ENST00000522963 RFXAPO00287 272 aa13.04□□□□□ -0.32
PVT1-215ENST00000522963 PDXKO00764 312 aa13.04□□□□□ -0.32
PVT1-215ENST00000522963 ABLIM1O14639 778 aa13.04□□□□□ -0.32
PVT1-215ENST00000522963 HNRNPDLO14979 420 aaKnown RBP13.04□□□□□ -0.32
PVT1-215ENST00000522963 IGFBP4P22692 258 aa13.04□□□□□ -0.32
PVT1-215ENST00000522963 ADSSP30520 456 aa13.04□□□□□ -0.32
PVT1-215ENST00000522963 LIG4P49917 911 aa13.04□□□□□ -0.32
PVT1-215ENST00000522963 GATMP50440 423 aa13.04□□□□□ -0.32
PVT1-215ENST00000522963 BTG3Q14201 252 aaPredicted RBP13.04□□□□□ -0.32
PVT1-215ENST00000522963 DSC3Q14574 896 aa13.04□□□□□ -0.32
PVT1-215ENST00000522963 CT47A1Q5JQC4 288 aaPredicted RBP13.04□□□□□ -0.32
PVT1-215ENST00000522963 ATF7IP2Q5U623 682 aa13.04□□□□□ -0.32
PVT1-215ENST00000522963 EEF1DP3Q658K8 133 aa13.04□□□□□ -0.32
PVT1-215ENST00000522963 ANKRD40Q6AI12 368 aa13.04□□□□□ -0.32
PVT1-215ENST00000522963 TTI2Q6NXR4 508 aa13.04□□□□□ -0.32
PVT1-215ENST00000522963 ZPBP2Q6X784 338 aa13.04□□□□□ -0.32
PVT1-215ENST00000522963 SLC24A5Q71RS6 500 aa13.04□□□□□ -0.32
PVT1-215ENST00000522963 CDR2LQ86X02 465 aaPredicted RBP13.04□□□□□ -0.32
PVT1-215ENST00000522963 NPAS4Q8IUM7 802 aa13.04□□□□□ -0.32
PVT1-215ENST00000522963 DUSP9Q99956 384 aaKnown RBP13.04□□□□□ -0.32
PVT1-215ENST00000522963 HAPLN2Q9GZV7 340 aa13.04□□□□□ -0.32
PVT1-215ENST00000522963 PDZD7Q9H5P4 517 aa13.04□□□□□ -0.32
PVT1-215ENST00000522963 PTPRHQ9HD43 1115 aa13.04□□□□□ -0.32
PVT1-215ENST00000522963 AGPAT3Q9NRZ7 376 aa13.04□□□□□ -0.32
PVT1-215ENST00000522963 RWDD2AQ9UIY3 292 aa13.04□□□□□ -0.32
PVT1-215ENST00000522963 TRAF3IP3Q9Y228 551 aa13.04□□□□□ -0.32
PVT1-215ENST00000522963 TNFSF13BQ9Y275 285 aa13.04□□□□□ -0.32
PVT1-215ENST00000522963 A0A1B0GUA9 196 aa13.03□□□□□ -0.32
PVT1-215ENST00000522963 TBKBP1A7MCY6 615 aa13.03□□□□□ -0.32
PVT1-215ENST00000522963 C9IYK1 514 aa13.03□□□□□ -0.32
PVT1-215ENST00000522963 CLIC2O15247 247 aa13.03□□□□□ -0.32
PVT1-215ENST00000522963 TOM1L1O75674 476 aa13.03□□□□□ -0.32
PVT1-215ENST00000522963 FOSL2P15408 326 aa13.03□□□□□ -0.32
PVT1-215ENST00000522963 PROZP22891 400 aa13.03□□□□□ -0.32
PVT1-215ENST00000522963 ERCC5P28715 1186 aaPredicted RBP13.03□□□□□ -0.32
PVT1-215ENST00000522963 AXLP30530 894 aa13.03□□□□□ -0.32
PVT1-215ENST00000522963 HTRA4P83105 476 aaPredicted RBP13.03□□□□□ -0.32
PVT1-215ENST00000522963 TMEM132AQ24JP5 1023 aa13.03□□□□□ -0.32
PVT1-215ENST00000522963 HS2ST1Q7LGA3 356 aa13.03□□□□□ -0.32
PVT1-215ENST00000522963 FIBCD1Q8N539 461 aa13.03□□□□□ -0.32
PVT1-215ENST00000522963 GAS2L1Q99501 681 aaPredicted RBP13.03□□□□□ -0.32
PVT1-215ENST00000522963 CBWD1Q9BRT8 395 aa13.03□□□□□ -0.32
PVT1-215ENST00000522963 TSPY26PQ9H489 355 aa13.03□□□□□ -0.32
PVT1-215ENST00000522963 STYXL1Q9Y6J8 313 aa13.03□□□□□ -0.32
PVT1-215ENST00000522963 NLRC5Q86WI3 1866 aa13.02□□□□□ -0.32
PVT1-215ENST00000522963 BICDL2A1A5D9 508 aa13.02□□□□□ -0.33
PVT1-215ENST00000522963 EPOPA6NHQ4 379 aa13.02□□□□□ -0.33
PVT1-215ENST00000522963 N4BP3O15049 544 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms