RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 CAPN8A6NHC0 703 aa4.35□□□□□ -1.71
HMGN1P28-201ENST00000521340 PRSS29PA6NIE9 313 aa4.35□□□□□ -1.71
HMGN1P28-201ENST00000521340 SLC16A6O15403 523 aa4.35□□□□□ -1.71
HMGN1P28-201ENST00000521340 NRP2O60462 931 aa4.35□□□□□ -1.71
HMGN1P28-201ENST00000521340 CYP2C8P10632 490 aa4.35□□□□□ -1.71
HMGN1P28-201ENST00000521340 TYRP1P17643 537 aa4.35□□□□□ -1.71
HMGN1P28-201ENST00000521340 GLDCP23378 1020 aa4.35□□□□□ -1.71
HMGN1P28-201ENST00000521340 PEX2P28328 305 aa4.35□□□□□ -1.71
HMGN1P28-201ENST00000521340 GUCY1A2P33402 732 aa4.35□□□□□ -1.71
HMGN1P28-201ENST00000521340 PRIM2P49643 509 aa4.35□□□□□ -1.71
HMGN1P28-201ENST00000521340 EPHB3P54753 998 aa4.35□□□□□ -1.71
HMGN1P28-201ENST00000521340 RAB1AP62820 205 aa4.35□□□□□ -1.71
HMGN1P28-201ENST00000521340 SRSF3P84103 164 aaKnown RBP4.35□□□□□ -1.71
HMGN1P28-201ENST00000521340 CDC42EP1Q00587 391 aa4.35□□□□□ -1.71
HMGN1P28-201ENST00000521340 TLE1Q04724 770 aa4.35□□□□□ -1.71
HMGN1P28-201ENST00000521340 NOGQ13253 232 aa4.35□□□□□ -1.71
HMGN1P28-201ENST00000521340 OS9Q13438 667 aaPredicted RBP4.35□□□□□ -1.71
HMGN1P28-201ENST00000521340 SNAPC2Q13487 334 aa4.35□□□□□ -1.71
HMGN1P28-201ENST00000521340 INO80DQ53TQ3 878 aaPredicted RBP4.35□□□□□ -1.71
HMGN1P28-201ENST00000521340 DARS2Q6PI48 645 aaKnown RBP4.35□□□□□ -1.71
HMGN1P28-201ENST00000521340 SRLQ86TD4 932 aa4.35□□□□□ -1.71
HMGN1P28-201ENST00000521340 TTC7BQ86TV6 843 aa4.35□□□□□ -1.71
HMGN1P28-201ENST00000521340 TMEFF1Q8IYR6 380 aa4.35□□□□□ -1.71
HMGN1P28-201ENST00000521340 UNC5BQ8IZJ1 945 aa4.35□□□□□ -1.71
HMGN1P28-201ENST00000521340 CAMKK1Q8N5S9 505 aa4.35□□□□□ -1.71
HMGN1P28-201ENST00000521340 RNF152Q8N8N0 203 aa4.35□□□□□ -1.71
HMGN1P28-201ENST00000521340 IL31RAQ8NI17 732 aa4.35□□□□□ -1.71
HMGN1P28-201ENST00000521340 MZB1Q8WU39 189 aa4.35□□□□□ -1.71
HMGN1P28-201ENST00000521340 LRTOMTQ8WZ04 291 aa4.35□□□□□ -1.71
HMGN1P28-201ENST00000521340 PGBD4Q96DM1 585 aa4.35□□□□□ -1.71
HMGN1P28-201ENST00000521340 PAWRQ96IZ0 340 aaKnown RBP4.35□□□□□ -1.71
HMGN1P28-201ENST00000521340 MRGPRX1Q96LB2 322 aa4.35□□□□□ -1.71
HMGN1P28-201ENST00000521340 TBCBQ99426 244 aa4.35□□□□□ -1.71
HMGN1P28-201ENST00000521340 ADI1Q9BV57 179 aa4.35□□□□□ -1.71
HMGN1P28-201ENST00000521340 APOL5Q9BWW9 433 aa4.35□□□□□ -1.71
HMGN1P28-201ENST00000521340 KATNBL1Q9H079 304 aa4.35□□□□□ -1.71
HMGN1P28-201ENST00000521340 ZMAT3Q9HA38 289 aaKnown RBP4.35□□□□□ -1.71
HMGN1P28-201ENST00000521340 NLRC4Q9NPP4 1024 aa4.35□□□□□ -1.71
HMGN1P28-201ENST00000521340 PLCB1Q9NQ66 1216 aa4.35□□□□□ -1.71
HMGN1P28-201ENST00000521340 POLR3BQ9NW08 1133 aaPredicted RBP4.35□□□□□ -1.71
HMGN1P28-201ENST00000521340 Q9UFV3 132 aa4.35□□□□□ -1.71
HMGN1P28-201ENST00000521340 DNAI1Q9UI46 699 aa4.35□□□□□ -1.71
HMGN1P28-201ENST00000521340 USP19O94966 1318 aa4.35□□□□□ -1.71
HMGN1P28-201ENST00000521340 TEX51A0A1B0GUA7 166 aa4.34□□□□□ -1.71
HMGN1P28-201ENST00000521340 RASA4BC9J798 803 aa4.34□□□□□ -1.71
HMGN1P28-201ENST00000521340 RASA4O43374 803 aa4.34□□□□□ -1.71
HMGN1P28-201ENST00000521340 PQBP1O60828 265 aaKnown RBP4.34□□□□□ -1.71
HMGN1P28-201ENST00000521340 FGAP02671 866 aa4.34□□□□□ -1.71
HMGN1P28-201ENST00000521340 ZNF28P17035 718 aa4.34□□□□□ -1.71
HMGN1P28-201ENST00000521340 SREBF1P36956 1147 aa4.34□□□□□ -1.71
HMGN1P28-201ENST00000521340 IL6STP40189 918 aaPredicted RBP4.34□□□□□ -1.71
HMGN1P28-201ENST00000521340 ARFIP2P53365 341 aa4.34□□□□□ -1.71
HMGN1P28-201ENST00000521340 GPSM2P81274 684 aa4.34□□□□□ -1.71
HMGN1P28-201ENST00000521340 FOXO4P98177 505 aa4.34□□□□□ -1.71
HMGN1P28-201ENST00000521340 SMAD4Q13485 552 aaKnown RBP4.34□□□□□ -1.71
HMGN1P28-201ENST00000521340 PLS1Q14651 629 aa4.34□□□□□ -1.71
HMGN1P28-201ENST00000521340 NOMO1Q15155 1222 aa4.34□□□□□ -1.71
HMGN1P28-201ENST00000521340 TARBP2Q15633 366 aaKnown RBP4.34□□□□□ -1.71
HMGN1P28-201ENST00000521340 TMEM95Q3KNT9 176 aa4.34□□□□□ -1.71
HMGN1P28-201ENST00000521340 DPP8Q6V1X1 898 aaPredicted RBP4.34□□□□□ -1.71
HMGN1P28-201ENST00000521340 FAM129CQ86XR2 697 aa4.34□□□□□ -1.71
HMGN1P28-201ENST00000521340 FAM186BQ8IYM0 893 aa4.34□□□□□ -1.71
HMGN1P28-201ENST00000521340 ATXN2LQ8WWM7 1075 aaKnown RBP4.34□□□□□ -1.71
HMGN1P28-201ENST00000521340 RGMAQ96B86 450 aa4.34□□□□□ -1.71
HMGN1P28-201ENST00000521340 CDK5RAP3Q96JB5 506 aa4.34□□□□□ -1.71
HMGN1P28-201ENST00000521340 ZSWIM3Q96MP5 696 aa4.34□□□□□ -1.71
HMGN1P28-201ENST00000521340 WDR92Q96MX6 357 aa4.34□□□□□ -1.71
HMGN1P28-201ENST00000521340 MYD88Q99836 296 aa4.34□□□□□ -1.71
HMGN1P28-201ENST00000521340 PDCD2LQ9BRP1 358 aa4.34□□□□□ -1.71
HMGN1P28-201ENST00000521340 BTBD1Q9H0C5 482 aa4.34□□□□□ -1.71
HMGN1P28-201ENST00000521340 ENKD1Q9H0I2 346 aa4.34□□□□□ -1.71
HMGN1P28-201ENST00000521340 BCO1Q9HAY6 547 aa4.34□□□□□ -1.71
HMGN1P28-201ENST00000521340 PCDH18Q9HCL0 1135 aa4.34□□□□□ -1.71
HMGN1P28-201ENST00000521340 CALCOCO1Q9P1Z2 691 aa4.34□□□□□ -1.71
HMGN1P28-201ENST00000521340 CTDP1Q9Y5B0 961 aaPredicted RBP4.34□□□□□ -1.71
HMGN1P28-201ENST00000521340 TCAF2A6NFQ2 919 aa4.33□□□□□ -1.72
HMGN1P28-201ENST00000521340 FAM171A2A8MVW0 826 aa4.33□□□□□ -1.72
HMGN1P28-201ENST00000521340 PRRG2O14669 202 aa4.33□□□□□ -1.72
HMGN1P28-201ENST00000521340 MAFGO15525 162 aa4.33□□□□□ -1.72
HMGN1P28-201ENST00000521340 PIP5K1CO60331 668 aa4.33□□□□□ -1.72
HMGN1P28-201ENST00000521340 DTNBO60941 627 aa4.33□□□□□ -1.72
HMGN1P28-201ENST00000521340 SETSIPP0DME0 302 aa4.33□□□□□ -1.72
HMGN1P28-201ENST00000521340 TYRP14679 529 aa4.33□□□□□ -1.72
HMGN1P28-201ENST00000521340 POLD1P28340 1107 aa4.33□□□□□ -1.72
HMGN1P28-201ENST00000521340 PCSK1P29120 753 aa4.33□□□□□ -1.72
HMGN1P28-201ENST00000521340 ADSLP30566 484 aaPredicted RBP4.33□□□□□ -1.72
HMGN1P28-201ENST00000521340 IL13P35225 146 aa4.33□□□□□ -1.72
HMGN1P28-201ENST00000521340 ADCY8P40145 1251 aa4.33□□□□□ -1.72
HMGN1P28-201ENST00000521340 ETV4P43268 484 aa4.33□□□□□ -1.72
HMGN1P28-201ENST00000521340 CACNB3P54284 484 aa4.33□□□□□ -1.72
HMGN1P28-201ENST00000521340 NRG3P56975 720 aa4.33□□□□□ -1.72
HMGN1P28-201ENST00000521340 LINC00310P59036 64 aa4.33□□□□□ -1.72
HMGN1P28-201ENST00000521340 ZNF543Q08ER8 600 aa4.33□□□□□ -1.72
HMGN1P28-201ENST00000521340 POLD3Q15054 466 aaPredicted RBP4.33□□□□□ -1.72
HMGN1P28-201ENST00000521340 LONRF1Q17RB8 773 aa4.33□□□□□ -1.72
HMGN1P28-201ENST00000521340 KHDC1Q4VXA5 237 aaKnown RBP4.33□□□□□ -1.72
HMGN1P28-201ENST00000521340 LCE5AQ5TCM9 118 aa4.33□□□□□ -1.72
HMGN1P28-201ENST00000521340 ZNF605Q86T29 641 aa4.33□□□□□ -1.72
HMGN1P28-201ENST00000521340 FAM90A1Q86YD7 464 aa4.33□□□□□ -1.72
HMGN1P28-201ENST00000521340 DCBLD1Q8N8Z6 715 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms