RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 APBA1Q02410 837 aa5.99□□□□□ -1.45
CLK4-207ENST00000520909 DDB1Q16531 1140 aa5.99□□□□□ -1.45
CLK4-207ENST00000520909 PRR16Q569H4 304 aa5.99□□□□□ -1.45
CLK4-207ENST00000520909 DRICH1Q6PGQ1 229 aaPredicted RBP5.99□□□□□ -1.45
CLK4-207ENST00000520909 CPEB3Q8NE35 698 aaKnown RBP5.99□□□□□ -1.45
CLK4-207ENST00000520909 PMFBP1Q8TBY8 1022 aa5.99□□□□□ -1.45
CLK4-207ENST00000520909 H2AFY2Q9P0M6 372 aaPredicted RBP5.99□□□□□ -1.45
CLK4-207ENST00000520909 EEA1Q15075 1411 aa5.99□□□□□ -1.45
CLK4-207ENST00000520909 POLA1P09884 1462 aaPredicted RBP5.99□□□□□ -1.45
CLK4-207ENST00000520909 RAD54L2Q9Y4B4 1467 aa5.99□□□□□ -1.45
CLK4-207ENST00000520909 GAS7O60861 476 aa5.99□□□□□ -1.45
CLK4-207ENST00000520909 SEC24DO94855 1032 aaPredicted RBP5.99□□□□□ -1.45
CLK4-207ENST00000520909 CLEC2LP0C7M8 214 aa5.99□□□□□ -1.45
CLK4-207ENST00000520909 SPATA31D3P0C874 917 aa5.99□□□□□ -1.45
CLK4-207ENST00000520909 SDSP20132 328 aa5.99□□□□□ -1.45
CLK4-207ENST00000520909 MGAT1P26572 445 aa5.99□□□□□ -1.45
CLK4-207ENST00000520909 CXCR5P32302 372 aa5.99□□□□□ -1.45
CLK4-207ENST00000520909 FOXI1Q12951 378 aa5.99□□□□□ -1.45
CLK4-207ENST00000520909 CCDC178Q5BJE1 867 aa5.99□□□□□ -1.45
CLK4-207ENST00000520909 SPATA31D4Q6ZUB0 917 aa5.99□□□□□ -1.45
CLK4-207ENST00000520909 MSL3Q8N5Y2 521 aaKnown RBP5.99□□□□□ -1.45
CLK4-207ENST00000520909 EFHBQ8N7U6 833 aa5.99□□□□□ -1.45
CLK4-207ENST00000520909 C8orf37Q96NL8 207 aa5.99□□□□□ -1.45
CLK4-207ENST00000520909 POGKQ9P215 609 aa5.99□□□□□ -1.45
CLK4-207ENST00000520909 MSRAQ9UJ68 235 aa5.99□□□□□ -1.45
CLK4-207ENST00000520909 KIF27Q86VH2 1401 aa5.98□□□□□ -1.45
CLK4-207ENST00000520909 CUX2O14529 1486 aa5.98□□□□□ -1.45
CLK4-207ENST00000520909 POLR2AP24928 1970 aaKnown RBP5.98□□□□□ -1.45
CLK4-207ENST00000520909 PFKMP08237 780 aa5.98□□□□□ -1.45
CLK4-207ENST00000520909 RBP3P10745 1247 aa5.98□□□□□ -1.45
CLK4-207ENST00000520909 DDX6P26196 483 aaKnown RBP eCLIP5.98□□□□□ -1.45
CLK4-207ENST00000520909 ELLP55199 621 aaPredicted RBP5.98□□□□□ -1.45
CLK4-207ENST00000520909 MGAT5Q09328 741 aa5.98□□□□□ -1.45
CLK4-207ENST00000520909 UBE3CQ15386 1083 aa5.98□□□□□ -1.45
CLK4-207ENST00000520909 ABHD17BQ5VST6 288 aa5.98□□□□□ -1.45
CLK4-207ENST00000520909 EFCAB12Q6NXP0 572 aa5.98□□□□□ -1.45
CLK4-207ENST00000520909 HDGFL2Q7Z4V5 671 aaPredicted RBP5.98□□□□□ -1.45
CLK4-207ENST00000520909 KIF18BQ86Y91 864 aa5.98□□□□□ -1.45
CLK4-207ENST00000520909 SYT12Q8IV01 421 aa5.98□□□□□ -1.45
CLK4-207ENST00000520909 OR10H5Q8NGA6 315 aa5.98□□□□□ -1.45
CLK4-207ENST00000520909 ZNF496Q96IT1 587 aaPredicted RBP5.98□□□□□ -1.45
CLK4-207ENST00000520909 CDC5LQ99459 802 aaKnown RBP5.98□□□□□ -1.45
CLK4-207ENST00000520909 FDXACB1Q9BRP7 624 aaPredicted RBP5.98□□□□□ -1.45
CLK4-207ENST00000520909 ORAI3Q9BRQ5 295 aa5.98□□□□□ -1.45
CLK4-207ENST00000520909 PRDM13Q9H4Q3 707 aa5.98□□□□□ -1.45
CLK4-207ENST00000520909 A0A1W2PR48 441 aa5.97□□□□□ -1.45
CLK4-207ENST00000520909 UNC119BA6NIH7 251 aa5.97□□□□□ -1.45
CLK4-207ENST00000520909 ZNF185O15231 689 aa5.97□□□□□ -1.45
CLK4-207ENST00000520909 TYRP1P17643 537 aa5.97□□□□□ -1.45
CLK4-207ENST00000520909 MXRA7P84157 204 aa5.97□□□□□ -1.45
CLK4-207ENST00000520909 PDCD4Q53EL6 469 aaKnown RBP5.97□□□□□ -1.45
CLK4-207ENST00000520909 SIMC1Q8NDZ2 872 aa5.97□□□□□ -1.45
CLK4-207ENST00000520909 TEX101Q9BY14 249 aa5.97□□□□□ -1.45
CLK4-207ENST00000520909 MAGEC2Q9UBF1 373 aaPredicted RBP5.97□□□□□ -1.45
CLK4-207ENST00000520909 TDRD9Q8NDG6 1382 aaKnown RBP5.96□□□□□ -1.46
CLK4-207ENST00000520909 TBKBP1A7MCY6 615 aa5.96□□□□□ -1.46
CLK4-207ENST00000520909 B5MCH6 92 aa5.96□□□□□ -1.46
CLK4-207ENST00000520909 INO80B-WBP1J3KQ70 363 aa5.96□□□□□ -1.46
CLK4-207ENST00000520909 PPP1R12AO14974 1030 aaPredicted RBP5.96□□□□□ -1.46
CLK4-207ENST00000520909 F2P00734 622 aa5.96□□□□□ -1.46
CLK4-207ENST00000520909 KRTAP10-11P60412 298 aa5.96□□□□□ -1.46
CLK4-207ENST00000520909 ZBTB41Q5SVQ8 909 aa5.96□□□□□ -1.46
CLK4-207ENST00000520909 GLCCI1Q86VQ1 547 aa5.96□□□□□ -1.46
CLK4-207ENST00000520909 GLB1L2Q8IW92 636 aa5.96□□□□□ -1.46
CLK4-207ENST00000520909 CAGE1Q8TC20 777 aa5.96□□□□□ -1.46
CLK4-207ENST00000520909 SLC9A6Q92581 669 aa5.96□□□□□ -1.46
CLK4-207ENST00000520909 INO80BQ9C086 356 aaPredicted RBP5.96□□□□□ -1.46
CLK4-207ENST00000520909 RNF181Q9P0P0 153 aa5.96□□□□□ -1.46
CLK4-207ENST00000520909 WDR62O43379 1518 aa5.95□□□□□ -1.46
CLK4-207ENST00000520909 ABCA10Q8WWZ4 1543 aa5.95□□□□□ -1.46
CLK4-207ENST00000520909 RFPL3O75679 317 aa5.95□□□□□ -1.46
CLK4-207ENST00000520909 ESRRBO95718 433 aa5.95□□□□□ -1.46
CLK4-207ENST00000520909 LTA4HP09960 611 aaKnown RBP5.95□□□□□ -1.46
CLK4-207ENST00000520909 PTH2RP49190 550 aa5.95□□□□□ -1.46
CLK4-207ENST00000520909 SQSTM1Q13501 440 aa5.95□□□□□ -1.46
CLK4-207ENST00000520909 TP53BP2Q13625 1128 aa5.95□□□□□ -1.46
CLK4-207ENST00000520909 BTNL9Q6UXG8 535 aa5.95□□□□□ -1.46
CLK4-207ENST00000520909 NXPE1Q8N323 547 aa5.95□□□□□ -1.46
CLK4-207ENST00000520909 BOLLQ8N9W6 283 aaKnown RBP5.95□□□□□ -1.46
CLK4-207ENST00000520909 TFAP2CQ92754 450 aa5.95□□□□□ -1.46
CLK4-207ENST00000520909 THG1LQ9NWX6 298 aaKnown RBP5.95□□□□□ -1.46
CLK4-207ENST00000520909 NUMBLQ9Y6R0 609 aa5.95□□□□□ -1.46
CLK4-207ENST00000520909 FPGT-TNNI3KV9GXZ4 949 aa5.95□□□□□ -1.46
CLK4-207ENST00000520909 ZMYM3Q14202 1370 aa5.94□□□□□ -1.46
CLK4-207ENST00000520909 IFT140Q96RY7 1462 aa5.94□□□□□ -1.46
CLK4-207ENST00000520909 PRSS38A1L453 326 aa5.94□□□□□ -1.46
CLK4-207ENST00000520909 EGR2P11161 476 aaPredicted RBP5.94□□□□□ -1.46
CLK4-207ENST00000520909 PLA2G5P39877 138 aa5.94□□□□□ -1.46
CLK4-207ENST00000520909 KPNA1P52294 538 aaPredicted RBP5.94□□□□□ -1.46
CLK4-207ENST00000520909 RESTQ13127 1097 aa5.94□□□□□ -1.46
CLK4-207ENST00000520909 PABPC4Q13310 644 aaKnown RBP eCLIP5.94□□□□□ -1.46
CLK4-207ENST00000520909 MPP3Q13368 585 aa5.94□□□□□ -1.46
CLK4-207ENST00000520909 C19orf54Q5BKX5 351 aa5.94□□□□□ -1.46
CLK4-207ENST00000520909 ANKS6Q68DC2 871 aa5.94□□□□□ -1.46
CLK4-207ENST00000520909 ARMC6Q6NXE6 501 aa5.94□□□□□ -1.46
CLK4-207ENST00000520909 CHTF18Q8WVB6 975 aa5.94□□□□□ -1.46
CLK4-207ENST00000520909 RSAD2Q8WXG1 361 aa5.94□□□□□ -1.46
CLK4-207ENST00000520909 SPATA5L1Q9BVQ7 753 aa5.94□□□□□ -1.46
CLK4-207ENST00000520909 CDK11AQ9UQ88 783 aaPredicted RBP5.94□□□□□ -1.46
CLK4-207ENST00000520909 MAP3K2Q9Y2U5 619 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms