RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 SLC35G2Q8TBE7 412 aa5.82□□□□□ -1.48
SQLE-202ENST00000518604 FEZF2Q8TBJ5 459 aa5.82□□□□□ -1.48
SQLE-202ENST00000518604 DPF2Q92785 391 aa5.82□□□□□ -1.48
SQLE-202ENST00000518604 C1GALT1C1Q96EU7 318 aa5.82□□□□□ -1.48
SQLE-202ENST00000518604 MVB12AQ96EY5 273 aa5.82□□□□□ -1.48
SQLE-202ENST00000518604 CDC5LQ99459 802 aaKnown RBP5.82□□□□□ -1.48
SQLE-202ENST00000518604 MAP3K14Q99558 947 aa5.82□□□□□ -1.48
SQLE-202ENST00000518604 GTPBP4Q9BZE4 634 aaKnown RBP5.82□□□□□ -1.48
SQLE-202ENST00000518604 ENKD1Q9H0I2 346 aa5.82□□□□□ -1.48
SQLE-202ENST00000518604 XYLT2Q9H1B5 865 aa5.82□□□□□ -1.48
SQLE-202ENST00000518604 C12orf65Q9H3J6 166 aaKnown RBP5.82□□□□□ -1.48
SQLE-202ENST00000518604 IL23AQ9NPF7 189 aa5.82□□□□□ -1.48
SQLE-202ENST00000518604 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.82□□□□□ -1.48
SQLE-202ENST00000518604 SLC16A6O15403 523 aa5.81□□□□□ -1.48
SQLE-202ENST00000518604 AP1G1O43747 822 aa5.81□□□□□ -1.48
SQLE-202ENST00000518604 CDC14BO60729 498 aa5.81□□□□□ -1.48
SQLE-202ENST00000518604 ITGA10O75578 1167 aa5.81□□□□□ -1.48
SQLE-202ENST00000518604 PLATP00750 562 aa5.81□□□□□ -1.48
SQLE-202ENST00000518604 ATF3P18847 181 aa5.81□□□□□ -1.48
SQLE-202ENST00000518604 CNR2P34972 360 aa5.81□□□□□ -1.48
SQLE-202ENST00000518604 SREBF1P36956 1147 aa5.81□□□□□ -1.48
SQLE-202ENST00000518604 CDC42EP1Q00587 391 aa5.81□□□□□ -1.48
SQLE-202ENST00000518604 B3GNT9Q6UX72 402 aa5.81□□□□□ -1.48
SQLE-202ENST00000518604 ZDHHC14Q8IZN3 488 aa5.81□□□□□ -1.48
SQLE-202ENST00000518604 PQLC1Q8N2U9 271 aa5.81□□□□□ -1.48
SQLE-202ENST00000518604 LILRA3Q8N6C8 439 aaPredicted RBP5.81□□□□□ -1.48
SQLE-202ENST00000518604 OR5M3Q8NGP4 307 aa5.81□□□□□ -1.48
SQLE-202ENST00000518604 OR2I1PQ8NGU4 316 aa5.81□□□□□ -1.48
SQLE-202ENST00000518604 CASKIN2Q8WXE0 1202 aa5.81□□□□□ -1.48
SQLE-202ENST00000518604 BORCS6Q96GS4 357 aa5.81□□□□□ -1.48
SQLE-202ENST00000518604 TEPSINQ96N21 525 aa5.81□□□□□ -1.48
SQLE-202ENST00000518604 UHRF1Q96T88 793 aaPredicted RBP5.81□□□□□ -1.48
SQLE-202ENST00000518604 TCF25Q9BQ70 676 aa5.81□□□□□ -1.48
SQLE-202ENST00000518604 LANCL2Q9NS86 450 aa5.81□□□□□ -1.48
SQLE-202ENST00000518604 DUSP10Q9Y6W6 482 aa5.81□□□□□ -1.48
SQLE-202ENST00000518604 A0A1W2PRX2 142 aa5.8□□□□□ -1.48
SQLE-202ENST00000518604 UBE2QL1A1L167 161 aa5.8□□□□□ -1.48
SQLE-202ENST00000518604 OTOL1A6NHN0 477 aaPredicted RBP5.8□□□□□ -1.48
SQLE-202ENST00000518604 PRPF3O43395 683 aaKnown RBP5.8□□□□□ -1.48
SQLE-202ENST00000518604 IL2RBP14784 551 aa5.8□□□□□ -1.48
SQLE-202ENST00000518604 SLC6A9P48067 706 aa5.8□□□□□ -1.48
SQLE-202ENST00000518604 GZMKP49863 264 aa5.8□□□□□ -1.48
SQLE-202ENST00000518604 JAG1P78504 1218 aa5.8□□□□□ -1.48
SQLE-202ENST00000518604 SP140Q13342 867 aa5.8□□□□□ -1.48
SQLE-202ENST00000518604 MRPL49Q13405 166 aaKnown RBP5.8□□□□□ -1.48
SQLE-202ENST00000518604 PGS1Q32NB8 556 aa5.8□□□□□ -1.48
SQLE-202ENST00000518604 C3orf36Q3SXR2 165 aa5.8□□□□□ -1.48
SQLE-202ENST00000518604 TBC1D10BQ4KMP7 808 aaPredicted RBP5.8□□□□□ -1.48
SQLE-202ENST00000518604 UBXN11Q5T124 520 aa5.8□□□□□ -1.48
SQLE-202ENST00000518604 C14orf80Q86SX3 495 aa5.8□□□□□ -1.48
SQLE-202ENST00000518604 RHOT1Q8IXI2 618 aa5.8□□□□□ -1.48
SQLE-202ENST00000518604 IL17RAQ96F46 866 aa5.8□□□□□ -1.48
SQLE-202ENST00000518604 DPYSL5Q9BPU6 564 aa5.8□□□□□ -1.48
SQLE-202ENST00000518604 MEGF9Q9H1U4 602 aa5.8□□□□□ -1.48
SQLE-202ENST00000518604 C1orf112Q9NSG2 853 aa5.8□□□□□ -1.48
SQLE-202ENST00000518604 TDP1Q9NUW8 608 aa5.8□□□□□ -1.48
SQLE-202ENST00000518604 TMEM140Q9NV12 185 aa5.8□□□□□ -1.48
SQLE-202ENST00000518604 CALCOCO1Q9P1Z2 691 aa5.8□□□□□ -1.48
SQLE-202ENST00000518604 NCDNQ9UBB6 729 aa5.8□□□□□ -1.48
SQLE-202ENST00000518604 SIK3Q9Y2K2 1263 aa5.8□□□□□ -1.48
SQLE-202ENST00000518604 ZNF536O15090 1300 aa5.79□□□□□ -1.48
SQLE-202ENST00000518604 NPEPPSL1A6NEC2 478 aa5.79□□□□□ -1.48
SQLE-202ENST00000518604 TEX33O43247 280 aa5.79□□□□□ -1.48
SQLE-202ENST00000518604 GUCY1A2P33402 732 aa5.79□□□□□ -1.48
SQLE-202ENST00000518604 CASRP41180 1078 aa5.79□□□□□ -1.48
SQLE-202ENST00000518604 IL12RB1P42701 662 aa5.79□□□□□ -1.48
SQLE-202ENST00000518604 APBA1Q02410 837 aa5.79□□□□□ -1.48
SQLE-202ENST00000518604 DSC2Q02487 901 aa5.79□□□□□ -1.48
SQLE-202ENST00000518604 SAFB2Q14151 953 aaKnown RBP eCLIP5.79□□□□□ -1.48
SQLE-202ENST00000518604 RAB39AQ14964 217 aa5.79□□□□□ -1.48
SQLE-202ENST00000518604 ACAP1Q15027 740 aa5.79□□□□□ -1.48
SQLE-202ENST00000518604 FAM47AQ5JRC9 791 aa5.79□□□□□ -1.48
SQLE-202ENST00000518604 LCE4AQ5TA78 99 aa5.79□□□□□ -1.48
SQLE-202ENST00000518604 MFSD5Q6N075 450 aa5.79□□□□□ -1.48
SQLE-202ENST00000518604 FAM111BQ6SJ93 734 aa5.79□□□□□ -1.48
SQLE-202ENST00000518604 ZNF572Q7Z3I7 529 aaPredicted RBP5.79□□□□□ -1.48
SQLE-202ENST00000518604 CATIPQ7Z7H3 387 aa5.79□□□□□ -1.48
SQLE-202ENST00000518604 TAX1BP1Q86VP1 789 aa5.79□□□□□ -1.48
SQLE-202ENST00000518604 DRC7Q8IY82 874 aa5.79□□□□□ -1.48
SQLE-202ENST00000518604 GPR135Q8IZ08 494 aa5.79□□□□□ -1.48
SQLE-202ENST00000518604 TRMT2AQ8IZ69 625 aaKnown RBP5.79□□□□□ -1.48
SQLE-202ENST00000518604 NSUN6Q8TEA1 469 aaKnown RBP5.79□□□□□ -1.48
SQLE-202ENST00000518604 DIS3LQ8TF46 1054 aaKnown RBP5.79□□□□□ -1.48
SQLE-202ENST00000518604 RUNDC1Q96C34 613 aa5.79□□□□□ -1.48
SQLE-202ENST00000518604 LRGUKQ96M69 825 aa5.79□□□□□ -1.48
SQLE-202ENST00000518604 LRRC37BQ96QE4 947 aa5.79□□□□□ -1.48
SQLE-202ENST00000518604 TAAR9Q96RI9 348 aa5.79□□□□□ -1.48
SQLE-202ENST00000518604 MPHOSPH9Q99550 1183 aa5.79□□□□□ -1.48
SQLE-202ENST00000518604 SENP6Q9GZR1 1112 aaPredicted RBP5.79□□□□□ -1.48
SQLE-202ENST00000518604 AGO3Q9H9G7 860 aaKnown RBP5.79□□□□□ -1.48
SQLE-202ENST00000518604 KMT5AQ9NQR1 393 aa5.79□□□□□ -1.48
SQLE-202ENST00000518604 PRDM11Q9NQV5 511 aa5.79□□□□□ -1.48
SQLE-202ENST00000518604 ANLNQ9NQW6 1124 aa5.79□□□□□ -1.48
SQLE-202ENST00000518604 MOCS1Q9NZB8 636 aa5.79□□□□□ -1.48
SQLE-202ENST00000518604 PPP4R1LQ9P1A2 415 aa5.79□□□□□ -1.48
SQLE-202ENST00000518604 POLHQ9Y253 713 aa5.79□□□□□ -1.48
SQLE-202ENST00000518604 PCDHA13Q9Y5I0 950 aa5.79□□□□□ -1.48
SQLE-202ENST00000518604 H3BML4 177 aa5.78□□□□□ -1.48
SQLE-202ENST00000518604 ADCY6O43306 1168 aa5.78□□□□□ -1.48
SQLE-202ENST00000518604 HOXA3O43365 443 aaPredicted RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms