RNA–Protein interactions for RNA: ENST00000517709.1

MCM4-202, Transcript of minichromosome maintenance complex component 4, humanhuman

TSL 2

Gene MCM4, Length 842 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4-202ENST00000517709 B3GALT6Q96L58 329 aa13.09□□□□□ -0.31
MCM4-202ENST00000517709 BLOC1S4Q9NUP1 217 aa13.09□□□□□ -0.31
MCM4-202ENST00000517709 SNTG2Q9NY99 539 aa13.09□□□□□ -0.31
MCM4-202ENST00000517709 ARHGAP28Q9P2N2 729 aa13.09□□□□□ -0.31
MCM4-202ENST00000517709 RAPGEFL1Q9UHV5 662 aa13.09□□□□□ -0.31
MCM4-202ENST00000517709 MTMR6Q9Y217 621 aa13.09□□□□□ -0.31
MCM4-202ENST00000517709 USP15Q9Y4E8 981 aaPredicted RBP13.09□□□□□ -0.31
MCM4-202ENST00000517709 HCFC2Q9Y5Z7 792 aa13.09□□□□□ -0.31
MCM4-202ENST00000517709 PHLPP2Q6ZVD8 1323 aa13.09□□□□□ -0.31
MCM4-202ENST00000517709 FAM86C2PA6NEL3 165 aa13.08□□□□□ -0.32
MCM4-202ENST00000517709 K7ELQ4 463 aaPredicted RBP13.08□□□□□ -0.32
MCM4-202ENST00000517709 ABLIM1O14639 778 aa13.08□□□□□ -0.32
MCM4-202ENST00000517709 ALDH7A1P49419 539 aaKnown RBP13.08□□□□□ -0.32
MCM4-202ENST00000517709 PEX3P56589 373 aa13.08□□□□□ -0.32
MCM4-202ENST00000517709 COASYQ13057 564 aa13.08□□□□□ -0.32
MCM4-202ENST00000517709 PRPF4BQ13523 1007 aaKnown RBP13.08□□□□□ -0.32
MCM4-202ENST00000517709 SMC1AQ14683 1233 aaKnown RBP13.08□□□□□ -0.32
MCM4-202ENST00000517709 KARSQ15046 597 aaKnown RBP13.08□□□□□ -0.32
MCM4-202ENST00000517709 NAB2Q15742 525 aa13.08□□□□□ -0.32
MCM4-202ENST00000517709 ARSHQ5FYA8 562 aa13.08□□□□□ -0.32
MCM4-202ENST00000517709 SPECC1Q5M775 1068 aa13.08□□□□□ -0.32
MCM4-202ENST00000517709 DDX53Q86TM3 631 aaKnown RBP13.08□□□□□ -0.32
MCM4-202ENST00000517709 CABP7Q86V35 215 aa13.08□□□□□ -0.32
MCM4-202ENST00000517709 PRIMPOLQ96LW4 560 aa13.08□□□□□ -0.32
MCM4-202ENST00000517709 RAB34Q9BZG1 259 aa13.08□□□□□ -0.32
MCM4-202ENST00000517709 TRIM6Q9C030 488 aaPredicted RBP13.08□□□□□ -0.32
MCM4-202ENST00000517709 C2orf40Q9H1Z8 148 aa13.08□□□□□ -0.32
MCM4-202ENST00000517709 C19orf67A6NJJ6 358 aa13.07□□□□□ -0.32
MCM4-202ENST00000517709 ACKR2O00590 384 aa13.07□□□□□ -0.32
MCM4-202ENST00000517709 N4BP3O15049 544 aa13.07□□□□□ -0.32
MCM4-202ENST00000517709 NCK2O43639 380 aa13.07□□□□□ -0.32
MCM4-202ENST00000517709 WEE2P0C1S8 567 aa13.07□□□□□ -0.32
MCM4-202ENST00000517709 CTSAP10619 480 aa13.07□□□□□ -0.32
MCM4-202ENST00000517709 EPCAMP16422 314 aa13.07□□□□□ -0.32
MCM4-202ENST00000517709 PLCG1P19174 1290 aa13.07□□□□□ -0.32
MCM4-202ENST00000517709 CA8P35219 290 aa13.07□□□□□ -0.32
MCM4-202ENST00000517709 MAPK6Q16659 721 aa13.07□□□□□ -0.32
MCM4-202ENST00000517709 ARL6IP4Q66PJ3 421 aaKnown RBP13.07□□□□□ -0.32
MCM4-202ENST00000517709 ANKRD54Q6NXT1 300 aa13.07□□□□□ -0.32
MCM4-202ENST00000517709 BRAPQ7Z569 592 aa13.07□□□□□ -0.32
MCM4-202ENST00000517709 GJD3Q8N144 294 aa13.07□□□□□ -0.32
MCM4-202ENST00000517709 MRPL43Q8N983 215 aaKnown RBP13.07□□□□□ -0.32
MCM4-202ENST00000517709 HASPINQ8TF76 798 aa13.07□□□□□ -0.32
MCM4-202ENST00000517709 SUSD6Q92537 303 aa13.07□□□□□ -0.32
MCM4-202ENST00000517709 KIFAP3Q92845 792 aa13.07□□□□□ -0.32
MCM4-202ENST00000517709 TMEM175Q9BSA9 504 aa13.07□□□□□ -0.32
MCM4-202ENST00000517709 HERC2P3Q9BVR0 1158 aa13.07□□□□□ -0.32
MCM4-202ENST00000517709 S1PR5Q9H228 398 aa13.07□□□□□ -0.32
MCM4-202ENST00000517709 NGRNQ9NPE2 291 aaKnown RBP13.07□□□□□ -0.32
MCM4-202ENST00000517709 PARP2Q9UGN5 583 aa13.07□□□□□ -0.32
MCM4-202ENST00000517709 FBXO2Q9UK22 296 aaPredicted RBP13.07□□□□□ -0.32
MCM4-202ENST00000517709 DNM3Q9UQ16 869 aa13.07□□□□□ -0.32
MCM4-202ENST00000517709 GIT1Q9Y2X7 761 aa13.07□□□□□ -0.32
MCM4-202ENST00000517709 DOCK8Q8NF50 2099 aa13.07□□□□□ -0.32
MCM4-202ENST00000517709 TCHHQ07283 1943 aa13.07□□□□□ -0.32
MCM4-202ENST00000517709 ZMYM2Q9UBW7 1377 aa13.07□□□□□ -0.32
MCM4-202ENST00000517709 CASTOR2A6NHX0 329 aa13.06□□□□□ -0.32
MCM4-202ENST00000517709 CCDC169A6NNP5 214 aa13.06□□□□□ -0.32
MCM4-202ENST00000517709 SLC16A4O15374 487 aa13.06□□□□□ -0.32
MCM4-202ENST00000517709 LILRB3O75022 631 aa13.06□□□□□ -0.32
MCM4-202ENST00000517709 PLA2G4BP0C869 781 aa13.06□□□□□ -0.32
MCM4-202ENST00000517709 GUCY2CP25092 1073 aa13.06□□□□□ -0.32
MCM4-202ENST00000517709 MARCKSP29966 332 aaPredicted RBP13.06□□□□□ -0.32
MCM4-202ENST00000517709 SSTR3P32745 418 aaPredicted RBP13.06□□□□□ -0.32
MCM4-202ENST00000517709 OR1G1P47890 313 aa13.06□□□□□ -0.32
MCM4-202ENST00000517709 KRT17Q04695 432 aa13.06□□□□□ -0.32
MCM4-202ENST00000517709 GRIK3Q13003 919 aa13.06□□□□□ -0.32
MCM4-202ENST00000517709 PPP2R5AQ15172 486 aa13.06□□□□□ -0.32
MCM4-202ENST00000517709 GLRA4Q5JXX5 417 aa13.06□□□□□ -0.32
MCM4-202ENST00000517709 ATF7IP2Q5U623 682 aa13.06□□□□□ -0.32
MCM4-202ENST00000517709 PDE12Q6L8Q7 609 aaKnown RBP13.06□□□□□ -0.32
MCM4-202ENST00000517709 TMEM184AQ6ZMB5 413 aa13.06□□□□□ -0.32
MCM4-202ENST00000517709 ADHFE1Q8IWW8 467 aa13.06□□□□□ -0.32
MCM4-202ENST00000517709 C12orf76Q8N812 135 aaPredicted RBP13.06□□□□□ -0.32
MCM4-202ENST00000517709 SYT2Q8N9I0 419 aaPredicted RBP13.06□□□□□ -0.32
MCM4-202ENST00000517709 CNNM3Q8NE01 707 aa13.06□□□□□ -0.32
MCM4-202ENST00000517709 PPP2R3CQ969Q6 453 aa13.06□□□□□ -0.32
MCM4-202ENST00000517709 EPSTI1Q96J88 318 aa13.06□□□□□ -0.32
MCM4-202ENST00000517709 CLIC6Q96NY7 704 aa13.06□□□□□ -0.32
MCM4-202ENST00000517709 USP28Q96RU2 1077 aa13.06□□□□□ -0.32
MCM4-202ENST00000517709 CDCA3Q99618 268 aaPredicted RBP13.06□□□□□ -0.32
MCM4-202ENST00000517709 TARS2Q9BW92 718 aaKnown RBP13.06□□□□□ -0.32
MCM4-202ENST00000517709 HAPLN2Q9GZV7 340 aa13.06□□□□□ -0.32
MCM4-202ENST00000517709 CDT1Q9H211 546 aa13.06□□□□□ -0.32
MCM4-202ENST00000517709 PUF60Q9UHX1 559 aaKnown RBP13.06□□□□□ -0.32
MCM4-202ENST00000517709 GDAQ9Y2T3 454 aa13.06□□□□□ -0.32
MCM4-202ENST00000517709 NOTCH4Q99466 2003 aa13.05□□□□□ -0.32
MCM4-202ENST00000517709 A0A087X0B3 334 aa13.05□□□□□ -0.32
MCM4-202ENST00000517709 C2CD2LO14523 706 aa13.05□□□□□ -0.32
MCM4-202ENST00000517709 KIF4AO95239 1232 aa13.05□□□□□ -0.32
MCM4-202ENST00000517709 CXCL14O95715 111 aa13.05□□□□□ -0.32
MCM4-202ENST00000517709 SP100P23497 879 aaPredicted RBP13.05□□□□□ -0.32
MCM4-202ENST00000517709 CEBPZQ03701 1054 aaKnown RBP13.05□□□□□ -0.32
MCM4-202ENST00000517709 DMP1Q13316 513 aaPredicted RBP13.05□□□□□ -0.32
MCM4-202ENST00000517709 PKP1Q13835 747 aa13.05□□□□□ -0.32
MCM4-202ENST00000517709 MCM6Q14566 821 aa13.05□□□□□ -0.32
MCM4-202ENST00000517709 PUS10Q3MIT2 529 aaKnown RBP13.05□□□□□ -0.32
MCM4-202ENST00000517709 TMEM161BQ8NDZ6 487 aa13.05□□□□□ -0.32
MCM4-202ENST00000517709 SLC22A17Q8WUG5 538 aa13.05□□□□□ -0.32
MCM4-202ENST00000517709 RSPH1Q8WYR4 309 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms