RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 TTC14Q96N46 770 aa3.71□□□□□ -1.82
CHD1-211ENST00000514344 IER2Q9BTL4 223 aa3.71□□□□□ -1.82
CHD1-211ENST00000514344 TRMT61BQ9BVS5 477 aaKnown RBP3.71□□□□□ -1.82
CHD1-211ENST00000514344 RHOBTB2Q9BYZ6 727 aa3.71□□□□□ -1.82
CHD1-211ENST00000514344 KAT14Q9H8E8 782 aa3.71□□□□□ -1.82
CHD1-211ENST00000514344 DACT1Q9NYF0 836 aa3.71□□□□□ -1.82
CHD1-211ENST00000514344 MAP3K20Q9NYL2 800 aaKnown RBP3.71□□□□□ -1.82
CHD1-211ENST00000514344 MRPS23Q9Y3D9 190 aaKnown RBP3.71□□□□□ -1.82
CHD1-211ENST00000514344 C2CD3Q4AC94 2353 aa3.7□□□□□ -1.82
CHD1-211ENST00000514344 DDX39AO00148 427 aaKnown RBP3.7□□□□□ -1.82
CHD1-211ENST00000514344 C8AP07357 584 aa3.7□□□□□ -1.82
CHD1-211ENST00000514344 ZFYP08048 801 aaPredicted RBP3.7□□□□□ -1.82
CHD1-211ENST00000514344 CT47B1P0C2W7 299 aaPredicted RBP3.7□□□□□ -1.82
CHD1-211ENST00000514344 RLBP1P12271 317 aa3.7□□□□□ -1.82
CHD1-211ENST00000514344 ABCG1P45844 678 aa3.7□□□□□ -1.82
CHD1-211ENST00000514344 PHKA2P46019 1235 aa3.7□□□□□ -1.82
CHD1-211ENST00000514344 GHRHRQ02643 423 aa3.7□□□□□ -1.82
CHD1-211ENST00000514344 PTGDRQ13258 359 aa3.7□□□□□ -1.82
CHD1-211ENST00000514344 SLC5A9Q2M3M2 681 aa3.7□□□□□ -1.82
CHD1-211ENST00000514344 ASPRV1Q53RT3 343 aa3.7□□□□□ -1.82
CHD1-211ENST00000514344 WDR44Q5JSH3 913 aa3.7□□□□□ -1.82
CHD1-211ENST00000514344 PPM1LQ5SGD2 360 aa3.7□□□□□ -1.82
CHD1-211ENST00000514344 PCNX4Q63HM2 1172 aa3.7□□□□□ -1.82
CHD1-211ENST00000514344 PRSS55Q6UWB4 352 aaPredicted RBP3.7□□□□□ -1.82
CHD1-211ENST00000514344 WDR5BQ86VZ2 330 aa3.7□□□□□ -1.82
CHD1-211ENST00000514344 MARCH9Q86YJ5 346 aa3.7□□□□□ -1.82
CHD1-211ENST00000514344 CKAP2LQ8IYA6 745 aa3.7□□□□□ -1.82
CHD1-211ENST00000514344 SLC7A14Q8TBB6 771 aa3.7□□□□□ -1.82
CHD1-211ENST00000514344 SPIRE2Q8WWL2 714 aa3.7□□□□□ -1.82
CHD1-211ENST00000514344 DNASE1L2Q92874 299 aa3.7□□□□□ -1.82
CHD1-211ENST00000514344 IRF7Q92985 503 aa3.7□□□□□ -1.82
CHD1-211ENST00000514344 DUSP15Q9H1R2 295 aaPredicted RBP3.7□□□□□ -1.82
CHD1-211ENST00000514344 ZNF334Q9HCZ1 680 aaPredicted RBP3.7□□□□□ -1.82
CHD1-211ENST00000514344 CHST12Q9NRB3 414 aa3.7□□□□□ -1.82
CHD1-211ENST00000514344 SLC9A2Q9UBY0 812 aa3.7□□□□□ -1.82
CHD1-211ENST00000514344 STK24Q9Y6E0 443 aa3.7□□□□□ -1.82
CHD1-211ENST00000514344 CSMD1Q96PZ7 3565 aa3.7□□□□□ -1.82
CHD1-211ENST00000514344 PI4KAP42356 2102 aa3.7□□□□□ -1.82
CHD1-211ENST00000514344 ZFHX3Q15911 3703 aa3.7□□□□□ -1.82
CHD1-211ENST00000514344 BCLAF3A2AJT9 711 aaKnown RBP3.7□□□□□ -1.82
CHD1-211ENST00000514344 KLRF2D3W0D1 207 aa3.7□□□□□ -1.82
CHD1-211ENST00000514344 ATXN7O15265 892 aaPredicted RBP3.7□□□□□ -1.82
CHD1-211ENST00000514344 ECI2O75521 394 aa3.7□□□□□ -1.82
CHD1-211ENST00000514344 OFD1O75665 1012 aa3.7□□□□□ -1.82
CHD1-211ENST00000514344 KRT10P13645 584 aa3.7□□□□□ -1.82
CHD1-211ENST00000514344 ITPKBP27987 946 aa3.7□□□□□ -1.82
CHD1-211ENST00000514344 ACTR2P61160 394 aa3.7□□□□□ -1.82
CHD1-211ENST00000514344 CYP4F3Q08477 520 aa3.7□□□□□ -1.82
CHD1-211ENST00000514344 TXNDC11Q6PKC3 985 aa3.7□□□□□ -1.82
CHD1-211ENST00000514344 Q6ZNB5 142 aa3.7□□□□□ -1.82
CHD1-211ENST00000514344 GPIHBP1Q8IV16 184 aa3.7□□□□□ -1.82
CHD1-211ENST00000514344 TMEFF1Q8IYR6 380 aa3.7□□□□□ -1.82
CHD1-211ENST00000514344 MIER1Q8N108 512 aa3.7□□□□□ -1.82
CHD1-211ENST00000514344 FAM181AQ8N9Y4 354 aa3.7□□□□□ -1.82
CHD1-211ENST00000514344 SMARCC2Q8TAQ2 1214 aa3.7□□□□□ -1.82
CHD1-211ENST00000514344 PIGSQ96S52 555 aa3.7□□□□□ -1.82
CHD1-211ENST00000514344 FSCN3Q9NQT6 498 aa3.7□□□□□ -1.82
CHD1-211ENST00000514344 MARCH5Q9NX47 278 aa3.7□□□□□ -1.82
CHD1-211ENST00000514344 DNMT3BQ9UBC3 853 aaKnown RBP3.7□□□□□ -1.82
CHD1-211ENST00000514344 PIN4Q9Y237 131 aaKnown RBP3.7□□□□□ -1.82
CHD1-211ENST00000514344 THADAQ6YHU6 1953 aa3.7□□□□□ -1.82
CHD1-211ENST00000514344 LRRK2Q5S007 2527 aa3.7□□□□□ -1.82
CHD1-211ENST00000514344 PLXNB3Q9ULL4 1909 aa3.7□□□□□ -1.82
CHD1-211ENST00000514344 FBN2P35556 2912 aa3.7□□□□□ -1.82
CHD1-211ENST00000514344 LOC100996750A0A140TA64 210 aa3.69□□□□□ -1.82
CHD1-211ENST00000514344 ZBTB42B2RXF5 422 aa3.69□□□□□ -1.82
CHD1-211ENST00000514344 H0Y626 953 aa3.69□□□□□ -1.82
CHD1-211ENST00000514344 TK2O00142 265 aa3.69□□□□□ -1.82
CHD1-211ENST00000514344 MEFVO15553 781 aaPredicted RBP3.69□□□□□ -1.82
CHD1-211ENST00000514344 TRIM16O95361 564 aa3.69□□□□□ -1.82
CHD1-211ENST00000514344 VIPR2P41587 438 aa3.69□□□□□ -1.82
CHD1-211ENST00000514344 KPNA1P52294 538 aaPredicted RBP3.69□□□□□ -1.82
CHD1-211ENST00000514344 CFHR1Q03591 330 aa3.69□□□□□ -1.82
CHD1-211ENST00000514344 LRRC32Q14392 662 aa3.69□□□□□ -1.82
CHD1-211ENST00000514344 ZKSCAN2Q63HK3 967 aa3.69□□□□□ -1.82
CHD1-211ENST00000514344 LILRA6Q6PI73 481 aa3.69□□□□□ -1.82
CHD1-211ENST00000514344 MFSD6Q6ZSS7 791 aa3.69□□□□□ -1.82
CHD1-211ENST00000514344 RAB44Q7Z6P3 723 aaPredicted RBP3.69□□□□□ -1.82
CHD1-211ENST00000514344 SPRYD3Q8NCJ5 442 aa3.69□□□□□ -1.82
CHD1-211ENST00000514344 FAM200AQ8TCP9 573 aa3.69□□□□□ -1.82
CHD1-211ENST00000514344 NLRP7Q8WX94 980 aa3.69□□□□□ -1.82
CHD1-211ENST00000514344 ZC3H10Q96K80 434 aaKnown RBP3.69□□□□□ -1.82
CHD1-211ENST00000514344 CAMK1GQ96NX5 476 aa3.69□□□□□ -1.82
CHD1-211ENST00000514344 HHIPQ96QV1 700 aa3.69□□□□□ -1.82
CHD1-211ENST00000514344 KRTAP4-6Q9BYQ5 205 aa3.69□□□□□ -1.82
CHD1-211ENST00000514344 ZSWIM6Q9HCJ5 1215 aa3.69□□□□□ -1.82
CHD1-211ENST00000514344 ZFP14Q9HCL3 533 aa3.69□□□□□ -1.82
CHD1-211ENST00000514344 ECHDC1Q9NTX5 307 aa3.69□□□□□ -1.82
CHD1-211ENST00000514344 FAM105AQ9NUU6 356 aa3.69□□□□□ -1.82
CHD1-211ENST00000514344 KCNK4Q9NYG8 393 aa3.69□□□□□ -1.82
CHD1-211ENST00000514344 ANAPC4Q9UJX5 808 aa3.69□□□□□ -1.82
CHD1-211ENST00000514344 SSX2IPQ9Y2D8 614 aa3.69□□□□□ -1.82
CHD1-211ENST00000514344 NEDD4P46934 1319 aa3.69□□□□□ -1.82
CHD1-211ENST00000514344 WDR81Q562E7 1941 aa3.69□□□□□ -1.82
CHD1-211ENST00000514344 HBP1O60381 514 aa3.69□□□□□ -1.82
CHD1-211ENST00000514344 XYLBO75191 536 aa3.69□□□□□ -1.82
CHD1-211ENST00000514344 C22orf31O95567 290 aa3.69□□□□□ -1.82
CHD1-211ENST00000514344 FGAP02671 866 aa3.69□□□□□ -1.82
CHD1-211ENST00000514344 FGRP09769 529 aa3.69□□□□□ -1.82
CHD1-211ENST00000514344 CEBPBP17676 345 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms