RNA–Protein interactions for RNA: ENST00000512853.5

SNX25-205, Transcript of sorting nexin 25, humanhuman

TSL 1 (best)

Gene SNX25, Length 1,937 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-205ENST00000512853 VEZTQ9HBM0 779 aa12.42□□□□□ -0.42
SNX25-205ENST00000512853 AAASQ9NRG9 546 aa12.42□□□□□ -0.42
SNX25-205ENST00000512853 GTF3C4Q9UKN8 822 aa12.42□□□□□ -0.42
SNX25-205ENST00000512853 PRR12Q9ULL5 1215 aa12.42□□□□□ -0.42
SNX25-205ENST00000512853 USP15Q9Y4E8 981 aaPredicted RBP12.42□□□□□ -0.42
SNX25-205ENST00000512853 COL2A1P02458 1487 aaPredicted RBP12.41□□□□□ -0.42
SNX25-205ENST00000512853 KDM4FA0A1W2PPD8 638 aa12.41□□□□□ -0.42
SNX25-205ENST00000512853 ARHGEF35A5YM69 484 aa12.41□□□□□ -0.42
SNX25-205ENST00000512853 GAS7O60861 476 aa12.41□□□□□ -0.42
SNX25-205ENST00000512853 SLCO1A2P46721 670 aa12.41□□□□□ -0.42
SNX25-205ENST00000512853 DLG4P78352 724 aa12.41□□□□□ -0.42
SNX25-205ENST00000512853 ZNF268Q14587 947 aaPredicted RBP12.41□□□□□ -0.42
SNX25-205ENST00000512853 RRP1BQ14684 758 aaKnown RBP12.41□□□□□ -0.42
SNX25-205ENST00000512853 ABCB5Q2M3G0 1257 aa12.41□□□□□ -0.42
SNX25-205ENST00000512853 ZNF746Q6NUN9 644 aaPredicted RBP12.41□□□□□ -0.42
SNX25-205ENST00000512853 VSTM1Q6UX27 236 aa12.41□□□□□ -0.42
SNX25-205ENST00000512853 SLC30A10Q6XR72 485 aa12.41□□□□□ -0.42
SNX25-205ENST00000512853 RNF207Q6ZRF8 634 aa12.41□□□□□ -0.42
SNX25-205ENST00000512853 NOP9Q86U38 636 aaKnown RBP12.41□□□□□ -0.42
SNX25-205ENST00000512853 CCDC105Q8IYK2 499 aa12.41□□□□□ -0.42
SNX25-205ENST00000512853 SYCP3Q8IZU3 236 aa12.41□□□□□ -0.42
SNX25-205ENST00000512853 ZNF564Q8TBZ8 553 aaPredicted RBP12.41□□□□□ -0.42
SNX25-205ENST00000512853 PSPC1Q8WXF1 523 aaKnown RBP12.41□□□□□ -0.42
SNX25-205ENST00000512853 UNC45AQ9H3U1 944 aa12.41□□□□□ -0.42
SNX25-205ENST00000512853 EBF2Q9HAK2 575 aa12.41□□□□□ -0.42
SNX25-205ENST00000512853 UVRAGQ9P2Y5 699 aa12.41□□□□□ -0.42
SNX25-205ENST00000512853 AGAP1Q9UPQ3 857 aa12.41□□□□□ -0.42
SNX25-205ENST00000512853 K7ENM7 598 aa12.41□□□□□ -0.42
SNX25-205ENST00000512853 O00370 1275 aa12.41□□□□□ -0.42
SNX25-205ENST00000512853 POLRMTO00411 1230 aaKnown RBP12.41□□□□□ -0.42
SNX25-205ENST00000512853 FSCN2O14926 492 aa12.41□□□□□ -0.42
SNX25-205ENST00000512853 TP73O15350 636 aa12.41□□□□□ -0.42
SNX25-205ENST00000512853 TCEA3O75764 348 aa12.41□□□□□ -0.42
SNX25-205ENST00000512853 UBOX5O94941 541 aa12.41□□□□□ -0.42
SNX25-205ENST00000512853 SGPL1O95470 568 aa12.41□□□□□ -0.42
SNX25-205ENST00000512853 NQO1P15559 274 aaKnown RBP12.41□□□□□ -0.42
SNX25-205ENST00000512853 ATP5DP30049 168 aa12.41□□□□□ -0.42
SNX25-205ENST00000512853 IFNAR2P48551 515 aa12.41□□□□□ -0.42
SNX25-205ENST00000512853 RWDD2BP57060 319 aa12.41□□□□□ -0.42
SNX25-205ENST00000512853 CALCOCO2Q13137 446 aa12.41□□□□□ -0.42
SNX25-205ENST00000512853 E2F5Q15329 346 aa12.41□□□□□ -0.42
SNX25-205ENST00000512853 SYDE1Q6ZW31 735 aaPredicted RBP12.41□□□□□ -0.42
SNX25-205ENST00000512853 GBP7Q8N8V2 638 aaPredicted RBP12.41□□□□□ -0.42
SNX25-205ENST00000512853 PLCD4Q9BRC7 762 aa12.41□□□□□ -0.42
SNX25-205ENST00000512853 NUP85Q9BW27 656 aa12.41□□□□□ -0.42
SNX25-205ENST00000512853 TMEM206Q9H813 350 aa12.41□□□□□ -0.42
SNX25-205ENST00000512853 EHMT1Q9H9B1 1298 aa12.41□□□□□ -0.42
SNX25-205ENST00000512853 BAIAP2L1Q9UHR4 511 aa12.41□□□□□ -0.42
SNX25-205ENST00000512853 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.41□□□□□ -0.42
SNX25-205ENST00000512853 ATRNL1Q5VV63 1379 aa12.4□□□□□ -0.42
SNX25-205ENST00000512853 LTBP4Q8N2S1 1624 aa12.4□□□□□ -0.42
SNX25-205ENST00000512853 SPOPO43791 374 aa12.4□□□□□ -0.42
SNX25-205ENST00000512853 GDF11O95390 407 aa12.4□□□□□ -0.42
SNX25-205ENST00000512853 GJB6O95452 261 aa12.4□□□□□ -0.42
SNX25-205ENST00000512853 FMO1Q01740 532 aa12.4□□□□□ -0.42
SNX25-205ENST00000512853 PTK6Q13882 451 aa12.4□□□□□ -0.42
SNX25-205ENST00000512853 DOK7Q18PE1 504 aa12.4□□□□□ -0.42
SNX25-205ENST00000512853 CCDC38Q502W7 563 aa12.4□□□□□ -0.42
SNX25-205ENST00000512853 FAM133BQ5BKY9 247 aaKnown RBP12.4□□□□□ -0.42
SNX25-205ENST00000512853 CPNE8Q86YQ8 564 aa12.4□□□□□ -0.42
SNX25-205ENST00000512853 PLEKHO2Q8TD55 490 aa12.4□□□□□ -0.42
SNX25-205ENST00000512853 CKAP2Q8WWK9 683 aa12.4□□□□□ -0.42
SNX25-205ENST00000512853 SHC3Q92529 594 aa12.4□□□□□ -0.42
SNX25-205ENST00000512853 ARHGEF2Q92974 986 aaKnown RBP12.4□□□□□ -0.42
SNX25-205ENST00000512853 KAT5Q92993 513 aa12.4□□□□□ -0.42
SNX25-205ENST00000512853 ACCSQ96QU6 501 aa12.4□□□□□ -0.42
SNX25-205ENST00000512853 LXNQ9BS40 222 aa12.4□□□□□ -0.42
SNX25-205ENST00000512853 DDX23Q9BUQ8 820 aaKnown RBP12.4□□□□□ -0.42
SNX25-205ENST00000512853 TEKT3Q9BXF9 490 aa12.4□□□□□ -0.42
SNX25-205ENST00000512853 LRRC4BQ9NT99 713 aa12.4□□□□□ -0.42
SNX25-205ENST00000512853 DBR1Q9UK59 544 aaKnown RBP12.4□□□□□ -0.42
SNX25-205ENST00000512853 COL11A2P13942 1736 aaPredicted RBP12.4□□□□□ -0.43
SNX25-205ENST00000512853 TMEM120BA0PK00 339 aa12.39□□□□□ -0.43
SNX25-205ENST00000512853 FAM170AA1A519 330 aa12.39□□□□□ -0.43
SNX25-205ENST00000512853 ATMINO43313 823 aaPredicted RBP12.39□□□□□ -0.43
SNX25-205ENST00000512853 SUN1O94901 812 aa12.39□□□□□ -0.43
SNX25-205ENST00000512853 POLR2MP0CAP2 368 aa12.39□□□□□ -0.43
SNX25-205ENST00000512853 MAN1A1P33908 653 aa12.39□□□□□ -0.43
SNX25-205ENST00000512853 KCNJ1P48048 391 aa12.39□□□□□ -0.43
SNX25-205ENST00000512853 GCLMP48507 274 aa12.39□□□□□ -0.43
SNX25-205ENST00000512853 MXI1P50539 228 aa12.39□□□□□ -0.43
SNX25-205ENST00000512853 CACNB3P54284 484 aa12.39□□□□□ -0.43
SNX25-205ENST00000512853 SNRPFP62306 86 aaKnown RBP12.39□□□□□ -0.43
SNX25-205ENST00000512853 FKBP1AP62942 108 aaKnown RBP12.39□□□□□ -0.43
SNX25-205ENST00000512853 KRT17Q04695 432 aa12.39□□□□□ -0.43
SNX25-205ENST00000512853 TCP10Q12799 353 aa12.39□□□□□ -0.43
SNX25-205ENST00000512853 BNIP1Q12981 228 aa12.39□□□□□ -0.43
SNX25-205ENST00000512853 RASA3Q14644 834 aa12.39□□□□□ -0.43
SNX25-205ENST00000512853 CEP55Q53EZ4 464 aa12.39□□□□□ -0.43
SNX25-205ENST00000512853 TBC1D1Q86TI0 1168 aaPredicted RBP12.39□□□□□ -0.43
SNX25-205ENST00000512853 C7orf43Q8WVR3 580 aa12.39□□□□□ -0.43
SNX25-205ENST00000512853 TCP11Q8WWU5 503 aa12.39□□□□□ -0.43
SNX25-205ENST00000512853 ZNF653Q96CK0 615 aa12.39□□□□□ -0.43
SNX25-205ENST00000512853 KREMEN1Q96MU8 473 aa12.39□□□□□ -0.43
SNX25-205ENST00000512853 CCDC113Q9H0I3 377 aa12.39□□□□□ -0.43
SNX25-205ENST00000512853 LGALS13Q9UHV8 139 aa12.39□□□□□ -0.43
SNX25-205ENST00000512853 TCP11X1B4DZS4 312 aa12.39□□□□□ -0.43
SNX25-205ENST00000512853 VIL1P09327 827 aaKnown RBP12.39□□□□□ -0.43
SNX25-205ENST00000512853 ITIH2P19823 946 aa12.39□□□□□ -0.43
SNX25-205ENST00000512853 JAG1P78504 1218 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms