RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 ADAM15Q13444 863 aa6.92□□□□□ -1.3
CHD1-208ENST00000512392 TRPC3Q13507 836 aa6.92□□□□□ -1.3
CHD1-208ENST00000512392 TNIP1Q15025 636 aa6.92□□□□□ -1.3
CHD1-208ENST00000512392 TAF7Q15545 349 aaPredicted RBP6.92□□□□□ -1.3
CHD1-208ENST00000512392 RPS26P11Q5JNZ5 115 aaPredicted RBP6.92□□□□□ -1.3
CHD1-208ENST00000512392 DCAF15Q66K64 600 aa6.92□□□□□ -1.3
CHD1-208ENST00000512392 KDELC1Q6UW63 502 aa6.92□□□□□ -1.3
CHD1-208ENST00000512392 KCTD6Q8NC69 237 aa6.92□□□□□ -1.3
CHD1-208ENST00000512392 IL17RDQ8NFM7 739 aa6.92□□□□□ -1.3
CHD1-208ENST00000512392 BRSK1Q8TDC3 778 aa6.92□□□□□ -1.3
CHD1-208ENST00000512392 ASIC4Q96FT7 647 aa6.92□□□□□ -1.3
CHD1-208ENST00000512392 APIPQ96GX9 242 aa6.92□□□□□ -1.3
CHD1-208ENST00000512392 C1orf159Q96HA4 380 aa6.92□□□□□ -1.3
CHD1-208ENST00000512392 ZNF845Q96IR2 970 aaPredicted RBP6.92□□□□□ -1.3
CHD1-208ENST00000512392 SLC6A18Q96N87 628 aa6.92□□□□□ -1.3
CHD1-208ENST00000512392 SUDS3Q9H7L9 328 aaPredicted RBP6.92□□□□□ -1.3
CHD1-208ENST00000512392 C14orf93Q9H972 538 aaKnown RBP6.92□□□□□ -1.3
CHD1-208ENST00000512392 ARHGAP26Q9UNA1 814 aa6.92□□□□□ -1.3
CHD1-208ENST00000512392 DEAF1O75398 565 aaPredicted RBP6.91□□□□□ -1.3
CHD1-208ENST00000512392 KIF20AO95235 890 aa6.91□□□□□ -1.3
CHD1-208ENST00000512392 ELNP15502 786 aa6.91□□□□□ -1.3
CHD1-208ENST00000512392 AGXTP21549 392 aa6.91□□□□□ -1.3
CHD1-208ENST00000512392 ADSLP30566 484 aaPredicted RBP6.91□□□□□ -1.3
CHD1-208ENST00000512392 SRSF2Q01130 221 aaKnown RBP6.91□□□□□ -1.3
CHD1-208ENST00000512392 FOXO1Q12778 655 aa6.91□□□□□ -1.3
CHD1-208ENST00000512392 PTK2BQ14289 1009 aa6.91□□□□□ -1.3
CHD1-208ENST00000512392 SNX17Q15036 470 aa6.91□□□□□ -1.3
CHD1-208ENST00000512392 TTLL7Q6ZT98 887 aa6.91□□□□□ -1.3
CHD1-208ENST00000512392 ADAT2Q7Z6V5 191 aaKnown RBP6.91□□□□□ -1.3
CHD1-208ENST00000512392 HERC6Q8IVU3 1022 aa6.91□□□□□ -1.3
CHD1-208ENST00000512392 CEP70Q8NHQ1 597 aa6.91□□□□□ -1.3
CHD1-208ENST00000512392 KCNG4Q8TDN1 519 aa6.91□□□□□ -1.3
CHD1-208ENST00000512392 GSDMAQ96QA5 445 aa6.91□□□□□ -1.3
CHD1-208ENST00000512392 EYA3Q99504 573 aa6.91□□□□□ -1.3
CHD1-208ENST00000512392 DDX23Q9BUQ8 820 aaKnown RBP6.91□□□□□ -1.3
CHD1-208ENST00000512392 CLEC4MQ9H2X3 399 aaPredicted RBP6.91□□□□□ -1.3
CHD1-208ENST00000512392 CABP5Q9NP86 173 aa6.91□□□□□ -1.3
CHD1-208ENST00000512392 DNAJC28Q9NX36 388 aa6.91□□□□□ -1.3
CHD1-208ENST00000512392 DUSP12Q9UNI6 340 aa6.91□□□□□ -1.3
CHD1-208ENST00000512392 SAMM50Q9Y512 469 aa6.91□□□□□ -1.3
CHD1-208ENST00000512392 AQP12BA6NM10 295 aa6.91□□□□□ -1.3
CHD1-208ENST00000512392 FAM229AH3BQW9 127 aa6.91□□□□□ -1.3
CHD1-208ENST00000512392 APOL1O14791 398 aa6.91□□□□□ -1.3
CHD1-208ENST00000512392 SPTLC2O15270 562 aa6.91□□□□□ -1.3
CHD1-208ENST00000512392 SART1O43290 800 aaKnown RBP6.91□□□□□ -1.3
CHD1-208ENST00000512392 ALOX15P16050 662 aaPredicted RBP6.91□□□□□ -1.3
CHD1-208ENST00000512392 PLCG1P19174 1290 aa6.91□□□□□ -1.3
CHD1-208ENST00000512392 ARNTP27540 789 aa6.91□□□□□ -1.3
CHD1-208ENST00000512392 CDC25BP30305 580 aa6.91□□□□□ -1.3
CHD1-208ENST00000512392 GSK3AP49840 483 aa6.91□□□□□ -1.3
CHD1-208ENST00000512392 GFRA1P56159 465 aa6.91□□□□□ -1.3
CHD1-208ENST00000512392 IKBKEQ14164 716 aa6.91□□□□□ -1.3
CHD1-208ENST00000512392 LRRC14Q15048 493 aa6.91□□□□□ -1.3
CHD1-208ENST00000512392 TMEM177Q53S58 311 aa6.91□□□□□ -1.3
CHD1-208ENST00000512392 USP53Q70EK8 1073 aa6.91□□□□□ -1.3
CHD1-208ENST00000512392 NGEFQ8N5V2 710 aa6.91□□□□□ -1.3
CHD1-208ENST00000512392 TSPYL6Q8N831 410 aa6.91□□□□□ -1.3
CHD1-208ENST00000512392 KLHL23Q8NBE8 558 aa6.91□□□□□ -1.3
CHD1-208ENST00000512392 COA7Q96BR5 231 aa6.91□□□□□ -1.3
CHD1-208ENST00000512392 NSUN4Q96CB9 384 aaKnown RBP6.91□□□□□ -1.3
CHD1-208ENST00000512392 BTBD1Q9H0C5 482 aa6.91□□□□□ -1.3
CHD1-208ENST00000512392 RPAP3Q9H6T3 665 aaPredicted RBP6.91□□□□□ -1.3
CHD1-208ENST00000512392 TMEM160Q9NX00 188 aa6.91□□□□□ -1.3
CHD1-208ENST00000512392 A0A0B4J269 797 aa6.9□□□□□ -1.3
CHD1-208ENST00000512392 SOX1O00570 391 aaPredicted RBP6.9□□□□□ -1.3
CHD1-208ENST00000512392 EIF4EBP3O60516 100 aaPredicted RBP6.9□□□□□ -1.3
CHD1-208ENST00000512392 SLC22A3O75751 556 aa6.9□□□□□ -1.3
CHD1-208ENST00000512392 SNX4O95219 450 aa6.9□□□□□ -1.3
CHD1-208ENST00000512392 MLYCDO95822 493 aa6.9□□□□□ -1.3
CHD1-208ENST00000512392 SRGAP2CP0DJJ0 459 aa6.9□□□□□ -1.3
CHD1-208ENST00000512392 ESRRAP11474 423 aaPredicted RBP6.9□□□□□ -1.3
CHD1-208ENST00000512392 PBLDP30039 288 aaPredicted RBP6.9□□□□□ -1.3
CHD1-208ENST00000512392 ATP5DP30049 168 aa6.9□□□□□ -1.3
CHD1-208ENST00000512392 DPP6P42658 865 aa6.9□□□□□ -1.3
CHD1-208ENST00000512392 ARL4DP49703 201 aa6.9□□□□□ -1.3
CHD1-208ENST00000512392 RRP1P56182 461 aaKnown RBP6.9□□□□□ -1.3
CHD1-208ENST00000512392 TLE2Q04725 743 aa6.9□□□□□ -1.3
CHD1-208ENST00000512392 PCDH1Q08174 1060 aa6.9□□□□□ -1.3
CHD1-208ENST00000512392 TTC39AQ5SRH9 613 aa6.9□□□□□ -1.3
CHD1-208ENST00000512392 C10orf76Q5T2E6 689 aa6.9□□□□□ -1.3
CHD1-208ENST00000512392 MAP1SQ66K74 1059 aaPredicted RBP6.9□□□□□ -1.3
CHD1-208ENST00000512392 DIEXFQ68CQ4 756 aaKnown RBP6.9□□□□□ -1.3
CHD1-208ENST00000512392 CHST14Q8NCH0 376 aa6.9□□□□□ -1.3
CHD1-208ENST00000512392 TTLL11Q8NHH1 800 aa6.9□□□□□ -1.3
CHD1-208ENST00000512392 PLBD2Q8NHP8 589 aa6.9□□□□□ -1.3
CHD1-208ENST00000512392 STT3BQ8TCJ2 826 aa6.9□□□□□ -1.3
CHD1-208ENST00000512392 NEK9Q8TD19 979 aa6.9□□□□□ -1.3
CHD1-208ENST00000512392 ARHGEF2Q92974 986 aaKnown RBP6.9□□□□□ -1.3
CHD1-208ENST00000512392 DCAF5Q96JK2 942 aa6.9□□□□□ -1.3
CHD1-208ENST00000512392 CNDP1Q96KN2 507 aa6.9□□□□□ -1.3
CHD1-208ENST00000512392 ORAI2Q96SN7 254 aa6.9□□□□□ -1.3
CHD1-208ENST00000512392 ACAT2Q9BWD1 397 aa6.9□□□□□ -1.3
CHD1-208ENST00000512392 SOX17Q9H6I2 414 aaPredicted RBP6.9□□□□□ -1.3
CHD1-208ENST00000512392 PAPOLBQ9NRJ5 636 aaKnown RBP6.9□□□□□ -1.3
CHD1-208ENST00000512392 UTP6Q9NYH9 597 aaKnown RBP6.9□□□□□ -1.3
CHD1-208ENST00000512392 CNPY2Q9Y2B0 182 aa6.9□□□□□ -1.3
CHD1-208ENST00000512392 SYNJ2BP-COX16A0A087WUM0 186 aa6.89□□□□□ -1.31
CHD1-208ENST00000512392 DLL1O00548 723 aa6.89□□□□□ -1.31
CHD1-208ENST00000512392 ZBTB43O43298 467 aa6.89□□□□□ -1.31
CHD1-208ENST00000512392 RPS2P15880 293 aaKnown RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms