RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 LY6KQ17RY6 165 aa13.9□□□□□ -0.18
HMGB2-205ENST00000511316 MOXD1Q6UVY6 613 aa13.9□□□□□ -0.18
HMGB2-205ENST00000511316 LRRC15Q8TF66 581 aa13.9□□□□□ -0.18
HMGB2-205ENST00000511316 ARL8AQ96BM9 186 aa13.9□□□□□ -0.18
HMGB2-205ENST00000511316 LSM14BQ9BX40 385 aaKnown RBP13.9□□□□□ -0.18
HMGB2-205ENST00000511316 SENP6Q9GZR1 1112 aaPredicted RBP13.9□□□□□ -0.18
HMGB2-205ENST00000511316 TMBIM4Q9HC24 238 aa13.9□□□□□ -0.18
HMGB2-205ENST00000511316 PANK4Q9NVE7 773 aa13.9□□□□□ -0.18
HMGB2-205ENST00000511316 PCDH10Q9P2E7 1040 aa13.9□□□□□ -0.18
HMGB2-205ENST00000511316 ZNF233A6NK53 670 aa13.9□□□□□ -0.18
HMGB2-205ENST00000511316 EPHB6O15197 1021 aa13.9□□□□□ -0.18
HMGB2-205ENST00000511316 GLI1P08151 1106 aa13.9□□□□□ -0.18
HMGB2-205ENST00000511316 MNAT1P51948 309 aa13.9□□□□□ -0.18
HMGB2-205ENST00000511316 ACLYP53396 1101 aa13.9□□□□□ -0.18
HMGB2-205ENST00000511316 SMTNP53814 917 aa13.9□□□□□ -0.18
HMGB2-205ENST00000511316 PDCLQ13371 301 aa13.9□□□□□ -0.18
HMGB2-205ENST00000511316 C1orf53Q5VUE5 145 aa13.9□□□□□ -0.18
HMGB2-205ENST00000511316 NAA35Q5VZE5 725 aa13.9□□□□□ -0.18
HMGB2-205ENST00000511316 SLC39A5Q6ZMH5 540 aa13.9□□□□□ -0.18
HMGB2-205ENST00000511316 TLK2Q86UE8 772 aa13.9□□□□□ -0.18
HMGB2-205ENST00000511316 NLRP14Q86W24 1093 aa13.9□□□□□ -0.18
HMGB2-205ENST00000511316 IFT81Q8WYA0 676 aa13.9□□□□□ -0.18
HMGB2-205ENST00000511316 TSEN34Q9BSV6 310 aaKnown RBP13.9□□□□□ -0.18
HMGB2-205ENST00000511316 TTC7AQ9ULT0 858 aaPredicted RBP13.9□□□□□ -0.18
HMGB2-205ENST00000511316 GTPBP10A4D1E9 387 aaKnown RBP13.89□□□□□ -0.19
HMGB2-205ENST00000511316 A6NJR5 290 aa13.89□□□□□ -0.19
HMGB2-205ENST00000511316 SLC16A3O15427 465 aaKnown RBP13.89□□□□□ -0.19
HMGB2-205ENST00000511316 MARCH6O60337 910 aa13.89□□□□□ -0.19
HMGB2-205ENST00000511316 ASGR1P07306 291 aa13.89□□□□□ -0.19
HMGB2-205ENST00000511316 C6orf222P0C671 652 aaPredicted RBP13.89□□□□□ -0.19
HMGB2-205ENST00000511316 TXNP10599 105 aaKnown RBP13.89□□□□□ -0.19
HMGB2-205ENST00000511316 ITGB5P18084 799 aa13.89□□□□□ -0.19
HMGB2-205ENST00000511316 RPL13P26373 211 aaKnown RBP13.89□□□□□ -0.19
HMGB2-205ENST00000511316 HNRNPH1P31943 449 aaKnown RBP13.89□□□□□ -0.19
HMGB2-205ENST00000511316 RDXP35241 583 aaKnown RBP13.89□□□□□ -0.19
HMGB2-205ENST00000511316 CARSP49589 748 aaKnown RBP13.89□□□□□ -0.19
HMGB2-205ENST00000511316 POLR2FP61218 127 aaKnown RBP13.89□□□□□ -0.19
HMGB2-205ENST00000511316 KCNMA1Q12791 1236 aa13.89□□□□□ -0.19
HMGB2-205ENST00000511316 ITGB3BPQ13352 177 aaPredicted RBP13.89□□□□□ -0.19
HMGB2-205ENST00000511316 GNASQ5JWF2 1037 aa13.89□□□□□ -0.19
HMGB2-205ENST00000511316 SEPT14Q6ZU15 432 aa13.89□□□□□ -0.19
HMGB2-205ENST00000511316 RNF180Q86T96 592 aa13.89□□□□□ -0.19
HMGB2-205ENST00000511316 SLFN12Q8IYM2 578 aa13.89□□□□□ -0.19
HMGB2-205ENST00000511316 ERMNQ8TAM6 284 aa13.89□□□□□ -0.19
HMGB2-205ENST00000511316 ZNF473Q8WTR7 871 aaKnown RBP13.89□□□□□ -0.19
HMGB2-205ENST00000511316 SCFD2Q8WU76 684 aa13.89□□□□□ -0.19
HMGB2-205ENST00000511316 CUL5Q93034 780 aa13.89□□□□□ -0.19
HMGB2-205ENST00000511316 KRT12Q99456 494 aa13.89□□□□□ -0.19
HMGB2-205ENST00000511316 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.89□□□□□ -0.192e-7■■■□□ 18.2
HMGB2-205ENST00000511316 RAB17Q9H0T7 212 aa13.89□□□□□ -0.19
HMGB2-205ENST00000511316 SUCLA2Q9P2R7 463 aaPredicted RBP13.89□□□□□ -0.19
HMGB2-205ENST00000511316 TELO2Q9Y4R8 837 aa13.89□□□□□ -0.19
HMGB2-205ENST00000511316 MYH10P35580 1976 aa13.88□□□□□ -0.19
HMGB2-205ENST00000511316 A0A1W2PQ45 241 aaPredicted RBP13.88□□□□□ -0.19
HMGB2-205ENST00000511316 A0A1W2PQY0 241 aa13.88□□□□□ -0.19
HMGB2-205ENST00000511316 BHMG1C9JSJ3 638 aaPredicted RBP13.88□□□□□ -0.19
HMGB2-205ENST00000511316 CHUKO15111 745 aa13.88□□□□□ -0.19
HMGB2-205ENST00000511316 BUB1O43683 1085 aa13.88□□□□□ -0.19
HMGB2-205ENST00000511316 CALUO43852 315 aaPredicted RBP13.88□□□□□ -0.19
HMGB2-205ENST00000511316 KIF4AO95239 1232 aa13.88□□□□□ -0.19
HMGB2-205ENST00000511316 MYCLP12524 364 aaPredicted RBP13.88□□□□□ -0.19
HMGB2-205ENST00000511316 CXCR5P32302 372 aa13.88□□□□□ -0.19
HMGB2-205ENST00000511316 RAPGEF1Q13905 1077 aa13.88□□□□□ -0.19
HMGB2-205ENST00000511316 PCNX4Q63HM2 1172 aa13.88□□□□□ -0.19
HMGB2-205ENST00000511316 CCDC121Q6ZUS5 278 aa13.88□□□□□ -0.19
HMGB2-205ENST00000511316 HOOK3Q86VS8 718 aa13.88□□□□□ -0.19
HMGB2-205ENST00000511316 CYP2W1Q8TAV3 490 aa13.88□□□□□ -0.19
HMGB2-205ENST00000511316 MYCBPAPQ8TBZ2 947 aa13.88□□□□□ -0.19
HMGB2-205ENST00000511316 MAGEC3Q8TD91 643 aa13.88□□□□□ -0.19
HMGB2-205ENST00000511316 VTI1AQ96AJ9 217 aa13.88□□□□□ -0.19
HMGB2-205ENST00000511316 CENPTQ96BT3 561 aa13.88□□□□□ -0.19
HMGB2-205ENST00000511316 DNAJC19Q96DA6 116 aa13.88□□□□□ -0.19
HMGB2-205ENST00000511316 RNPC3Q96LT9 517 aaKnown RBP13.88□□□□□ -0.19
HMGB2-205ENST00000511316 SPAG5Q96R06 1193 aa13.88□□□□□ -0.19
HMGB2-205ENST00000511316 CCT8L2Q96SF2 557 aa13.88□□□□□ -0.19
HMGB2-205ENST00000511316 FAM129AQ9BZQ8 928 aa13.88□□□□□ -0.19
HMGB2-205ENST00000511316 TMEM260Q9NX78 707 aa13.88□□□□□ -0.19
HMGB2-205ENST00000511316 KIAA1217Q5T5P2 1943 aa13.88□□□□□ -0.19
HMGB2-205ENST00000511316 MOXD2PA6NHM9 499 aa13.87□□□□□ -0.19
HMGB2-205ENST00000511316 NOL4O94818 638 aa13.87□□□□□ -0.19
HMGB2-205ENST00000511316 KLRC1P26715 233 aa13.87□□□□□ -0.19
HMGB2-205ENST00000511316 ICAM3P32942 547 aa13.87□□□□□ -0.19
HMGB2-205ENST00000511316 CDK7P50613 346 aa13.87□□□□□ -0.19
HMGB2-205ENST00000511316 ARHGAP1Q07960 439 aa13.87□□□□□ -0.19
HMGB2-205ENST00000511316 ACTN3Q08043 901 aaPredicted RBP13.87□□□□□ -0.19
HMGB2-205ENST00000511316 HLTFQ14527 1009 aaKnown RBP eCLIP13.87□□□□□ -0.195e-31■□□□□ 8.2
HMGB2-205ENST00000511316 FSCN1Q16658 493 aaKnown RBP13.87□□□□□ -0.19
HMGB2-205ENST00000511316 CEP85LQ5SZL2 805 aa13.87□□□□□ -0.19
HMGB2-205ENST00000511316 DYMQ7RTS9 669 aa13.87□□□□□ -0.19
HMGB2-205ENST00000511316 CASKIN2Q8WXE0 1202 aa13.87□□□□□ -0.19
HMGB2-205ENST00000511316 SEC14L1Q92503 715 aa13.87□□□□□ -0.19
HMGB2-205ENST00000511316 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.87□□□□□ -0.19
HMGB2-205ENST00000511316 STMN4Q9H169 189 aaPredicted RBP13.87□□□□□ -0.19
HMGB2-205ENST00000511316 DDX25Q9UHL0 483 aaKnown RBP13.87□□□□□ -0.19
HMGB2-205ENST00000511316 TRAF3IP3Q9Y228 551 aa13.87□□□□□ -0.19
HMGB2-205ENST00000511316 PLAAQ9Y263 795 aa13.87□□□□□ -0.19
HMGB2-205ENST00000511316 CAPN7Q9Y6W3 813 aa13.87□□□□□ -0.19
HMGB2-205ENST00000511316 FRMD3A2A2Y4 597 aa13.87□□□□□ -0.19
HMGB2-205ENST00000511316 GMNCA6NCL1 334 aa13.87□□□□□ -0.19
HMGB2-205ENST00000511316 SPATA31C2B4DYI2 1134 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms