RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 KCNA1Q09470 495 aa18.31■□□□□ 0.52
SQSTM1-211ENST00000506690 SLC5A9Q2M3M2 681 aa18.31■□□□□ 0.52
SQSTM1-211ENST00000506690 PPP1R21Q6ZMI0 780 aa18.31■□□□□ 0.52
SQSTM1-211ENST00000506690 WNT8AQ9H1J5 351 aa18.31■□□□□ 0.52
SQSTM1-211ENST00000506690 LRRC19Q9H756 370 aa18.31■□□□□ 0.52
SQSTM1-211ENST00000506690 SEPT11Q9NVA2 429 aaKnown RBP18.31■□□□□ 0.52
SQSTM1-211ENST00000506690 NKIRAS1Q9NYS0 192 aa18.31■□□□□ 0.52
SQSTM1-211ENST00000506690 HAO1Q9UJM8 370 aa18.31■□□□□ 0.52
SQSTM1-211ENST00000506690 MYO3BQ8WXR4 1341 aa18.31■□□□□ 0.52
SQSTM1-211ENST00000506690 IRS2Q9Y4H2 1338 aa18.31■□□□□ 0.52
SQSTM1-211ENST00000506690 MAGEB2O15479 319 aa18.31■□□□□ 0.52
SQSTM1-211ENST00000506690 SNHG28P0DPA3 235 aa18.31■□□□□ 0.52
SQSTM1-211ENST00000506690 MTHFD1LQ6UB35 978 aa18.31■□□□□ 0.52
SQSTM1-211ENST00000506690 DNAJC9Q8WXX5 260 aa18.31■□□□□ 0.52
SQSTM1-211ENST00000506690 FAM136AQ96C01 138 aa18.31■□□□□ 0.52
SQSTM1-211ENST00000506690 LRRC37BQ96QE4 947 aa18.31■□□□□ 0.52
SQSTM1-211ENST00000506690 POP1Q99575 1024 aaKnown RBP18.31■□□□□ 0.52
SQSTM1-211ENST00000506690 TBC1D10AQ9BXI6 508 aa18.31■□□□□ 0.52
SQSTM1-211ENST00000506690 ANKRD2Q9GZV1 360 aa18.31■□□□□ 0.52
SQSTM1-211ENST00000506690 KIAA1683Q9H0B3 1180 aa18.31■□□□□ 0.52
SQSTM1-211ENST00000506690 RPL26L1Q9UNX3 145 aaKnown RBP18.31■□□□□ 0.52
SQSTM1-211ENST00000506690 ATF5Q9Y2D1 282 aaPredicted RBP18.31■□□□□ 0.52
SQSTM1-211ENST00000506690 ACTL7BQ9Y614 415 aa18.31■□□□□ 0.52
SQSTM1-211ENST00000506690 T-ENOLP0DO92 83 aa18.3■□□□□ 0.52
SQSTM1-211ENST00000506690 RXRBP28702 533 aa18.3■□□□□ 0.52
SQSTM1-211ENST00000506690 PSMC2P35998 433 aaKnown RBP18.3■□□□□ 0.52
SQSTM1-211ENST00000506690 RPS8P62241 208 aaKnown RBP18.3■□□□□ 0.52
SQSTM1-211ENST00000506690 PABPC4Q13310 644 aaKnown RBP eCLIP18.3■□□□□ 0.52
SQSTM1-211ENST00000506690 TSNAXIP1Q2TAA8 658 aa18.3■□□□□ 0.52
SQSTM1-211ENST00000506690 FAM186BQ8IYM0 893 aa18.3■□□□□ 0.52
SQSTM1-211ENST00000506690 MORC4Q8TE76 937 aa18.3■□□□□ 0.52
SQSTM1-211ENST00000506690 AGPAT1Q99943 283 aa18.3■□□□□ 0.52
SQSTM1-211ENST00000506690 DNAJC18Q9H819 358 aa18.3■□□□□ 0.52
SQSTM1-211ENST00000506690 JMJD4Q9H9V9 463 aa18.3■□□□□ 0.52
SQSTM1-211ENST00000506690 PIDD1Q9HB75 910 aa18.3■□□□□ 0.52
SQSTM1-211ENST00000506690 APEX2Q9UBZ4 518 aa18.3■□□□□ 0.52
SQSTM1-211ENST00000506690 USP20Q9Y2K6 914 aa18.3■□□□□ 0.52
SQSTM1-211ENST00000506690 USH1CQ9Y6N9 552 aa18.3■□□□□ 0.52
SQSTM1-211ENST00000506690 TRAFD1O14545 582 aaPredicted RBP18.3■□□□□ 0.52
SQSTM1-211ENST00000506690 CETPP11597 493 aa18.3■□□□□ 0.52
SQSTM1-211ENST00000506690 ITIH2P19823 946 aa18.3■□□□□ 0.52
SQSTM1-211ENST00000506690 SP100P23497 879 aaPredicted RBP18.3■□□□□ 0.52
SQSTM1-211ENST00000506690 ALDH3A1P30838 453 aa18.3■□□□□ 0.52
SQSTM1-211ENST00000506690 GSTO1P78417 241 aa18.3■□□□□ 0.52
SQSTM1-211ENST00000506690 SPIRE1Q08AE8 756 aa18.3■□□□□ 0.52
SQSTM1-211ENST00000506690 MOGSQ13724 837 aa18.3■□□□□ 0.52
SQSTM1-211ENST00000506690 TMEM154Q6P9G4 183 aa18.3■□□□□ 0.52
SQSTM1-211ENST00000506690 FAM47EQ6ZV65 393 aa18.3■□□□□ 0.52
SQSTM1-211ENST00000506690 RBBP8NLQ8NC74 664 aaPredicted RBP18.3■□□□□ 0.52
SQSTM1-211ENST00000506690 WDR35Q9P2L0 1181 aa18.3■□□□□ 0.52
SQSTM1-211ENST00000506690 C2CD2Q9Y426 696 aa18.3■□□□□ 0.52
SQSTM1-211ENST00000506690 TNRC6CQ9HCJ0 1690 aaKnown RBP18.29■□□□□ 0.52
SQSTM1-211ENST00000506690 TMEM110-MUSTN1A8MSY1 372 aa18.29■□□□□ 0.52
SQSTM1-211ENST00000506690 RSPH10B2B2RC85 870 aa18.29■□□□□ 0.52
SQSTM1-211ENST00000506690 GCNT3O95395 438 aa18.29■□□□□ 0.52
SQSTM1-211ENST00000506690 FTLP02792 175 aaPredicted RBP18.29■□□□□ 0.52
SQSTM1-211ENST00000506690 RSPH10BP0C881 870 aa18.29■□□□□ 0.52
SQSTM1-211ENST00000506690 KYNUQ16719 465 aa18.29■□□□□ 0.52
SQSTM1-211ENST00000506690 CBWD6Q4V339 395 aa18.29■□□□□ 0.52
SQSTM1-211ENST00000506690 CBWD3Q5JTY5 395 aa18.29■□□□□ 0.52
SQSTM1-211ENST00000506690 CBWD5Q5RIA9 395 aa18.29■□□□□ 0.52
SQSTM1-211ENST00000506690 TMEM63BQ5T3F8 832 aa18.29■□□□□ 0.52
SQSTM1-211ENST00000506690 LONP2Q86WA8 852 aa18.29■□□□□ 0.52
SQSTM1-211ENST00000506690 SUPT20HQ8NEM7 779 aa18.29■□□□□ 0.52
SQSTM1-211ENST00000506690 DNM3Q9UQ16 869 aa18.29■□□□□ 0.52
SQSTM1-211ENST00000506690 NAALADL1Q9UQQ1 740 aa18.29■□□□□ 0.52
SQSTM1-211ENST00000506690 ZNF652Q9Y2D9 606 aa18.29■□□□□ 0.52
SQSTM1-211ENST00000506690 ZMYM2Q9UBW7 1377 aa18.29■□□□□ 0.52
SQSTM1-211ENST00000506690 MAPK13O15264 365 aa18.29■□□□□ 0.52
SQSTM1-211ENST00000506690 MTA2O94776 668 aa18.29■□□□□ 0.52
SQSTM1-211ENST00000506690 SPATA31C1P0DKV0 1188 aa18.29■□□□□ 0.52
SQSTM1-211ENST00000506690 WDR4P57081 412 aaKnown RBP18.29■□□□□ 0.52
SQSTM1-211ENST00000506690 GPC5P78333 572 aa18.29■□□□□ 0.52
SQSTM1-211ENST00000506690 IL9RQ01113 521 aa18.29■□□□□ 0.52
SQSTM1-211ENST00000506690 PDCD2Q16342 344 aaPredicted RBP18.29■□□□□ 0.52
SQSTM1-211ENST00000506690 GRIK5Q16478 980 aa18.29■□□□□ 0.52
SQSTM1-211ENST00000506690 NFIL3Q16649 462 aa18.29■□□□□ 0.52
SQSTM1-211ENST00000506690 SEPT14Q6ZU15 432 aa18.29■□□□□ 0.52
SQSTM1-211ENST00000506690 SRRM1Q8IYB3 904 aaKnown RBP18.29■□□□□ 0.52
SQSTM1-211ENST00000506690 WDR66Q8TBY9 1149 aa18.29■□□□□ 0.52
SQSTM1-211ENST00000506690 IFT43Q96FT9 208 aa18.29■□□□□ 0.52
SQSTM1-211ENST00000506690 INTS2Q9H0H0 1204 aaKnown RBP18.29■□□□□ 0.52
SQSTM1-211ENST00000506690 BCAS3Q9H6U6 928 aa18.29■□□□□ 0.52
SQSTM1-211ENST00000506690 EURLQ9NYK6 297 aa18.29■□□□□ 0.52
SQSTM1-211ENST00000506690 MROH7Q68CQ1 1323 aa18.28■□□□□ 0.52
SQSTM1-211ENST00000506690 CYP3A7-CYP3A51PA0A087WV96 503 aa18.28■□□□□ 0.52
SQSTM1-211ENST00000506690 MEIS1O00470 390 aa18.28■□□□□ 0.52
SQSTM1-211ENST00000506690 CDH16O75309 829 aa18.28■□□□□ 0.52
SQSTM1-211ENST00000506690 CYP3A7P24462 503 aa18.28■□□□□ 0.52
SQSTM1-211ENST00000506690 IVDP26440 423 aa18.28■□□□□ 0.52
SQSTM1-211ENST00000506690 KCNQ4P56696 695 aa18.28■□□□□ 0.52
SQSTM1-211ENST00000506690 KRT17Q04695 432 aa18.28■□□□□ 0.52
SQSTM1-211ENST00000506690 MESDQ14696 234 aa18.28■□□□□ 0.52
SQSTM1-211ENST00000506690 OR52E8Q6IFG1 317 aa18.28■□□□□ 0.52
SQSTM1-211ENST00000506690 ADGRF4Q8IZF3 695 aa18.28■□□□□ 0.52
SQSTM1-211ENST00000506690 CFAP61Q8NHU2 1237 aa18.28■□□□□ 0.52
SQSTM1-211ENST00000506690 TTC8Q8TAM2 541 aa18.28■□□□□ 0.52
SQSTM1-211ENST00000506690 SLC20A1Q8WUM9 679 aa18.28■□□□□ 0.52
SQSTM1-211ENST00000506690 MBOAT7Q96N66 472 aa18.28■□□□□ 0.52
SQSTM1-211ENST00000506690 MKNK1Q9BUB5 465 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms